Clone BO35307 Report

Search the DGRC for BO35307

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG34120-RB
Protein status:BO35307.pep: Imported from assembly
Sequenced Size:781

Clone Sequence Records

BO35307.complete Sequence

781 bp assembled on 2015-03-10

GenBank Submission: KX794944

> BO35307.complete
GAAGTTATCAGTCGACATGAGGGTGCACCTGAATGGTCGCGAGGTCCGGG
AGCTGTTGCGAAAGGATTTGCTGGTGCGATGGCGACAGAAAGGGCTGAGT
CTGATCCTGTTGGCCTGGCCAGTGATGGTCTTTATGCTGCTCTATCTGAT
CCGTCTGAAGTACGGATCGGAGGAGTTGGAGGCCTGCCAGTATCCCACTC
GCCTGCTGCCCACCAAGAACCAAGTGGTTCCCGCTGCCTTCTCCTACATA
TGCAGTATTGAGAACCGCTGCCAGCCGGCGCATCCTTACGAGGAGTATTC
CCATTGGAAGGAGGCGCCACTGCACTCCGTGATCGATGTGGTCAACGCGT
TCGTAACCGACGAACGGCTCCACAAGGCCGTCGTGGAGCTGGCCGAAAAG
GCCAACTTTGTGTCGGCCATAACTACATTGATCACCAGTGATCGGTTCGA
CATCATACGAAGTAACATAAGTGAAATAATTTCCCTCGTGCCCGAAATCG
AACGACGAATGAACTACAGCTTCGACATCAAACATTTGTTTTCGAATCGC
GAAACCTTCGTGAAGTTGGGCGTTCTTTTGTGTGGTCATCCGTTTCCCAA
TACCGATACTATACCGTTGGTCAATGAAATCCTGGAATCCGAGGACTTTA
GCCAGGCCAACGATGCAGAGATCGATGCAATGCCCACCCGTCGTCGTCGT
CGATACGAAGATCTTCCCACGGACTGGAGGCCAAGTGAGCATGACCAAAT
ATTTTTTAATATTGCAAGCTTTCTAGACCAT

BO35307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34120-RB 750 CG34120-PB 1..747 17..763 3720 99.9 Plus
CG34120-RE 5997 CG34120-PE 1..718 17..734 3575 99.9 Plus
CG34120-RC 5994 CG34120-PC 1..718 17..734 3575 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG34120-RB 980 CG34120-RB 197..943 17..763 3720 99.9 Plus
CG34120-RE 7388 CG34120-RE 568..1285 17..734 3575 99.9 Plus
CG34120-RC 6688 CG34120-RC 568..1285 17..734 3575 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21132451..21132752 17..318 1510 100 Plus
X 23542271 X 21132805..21132951 319..465 720 99.3 Plus
X 23542271 X 21133328..21133468 546..686 705 100 Plus
X 23542271 X 21133187..21133270 462..545 420 100 Plus
X 23542271 X 21133548..21133624 687..763 385 100 Plus
Blast to na_te.dros performed on 2015-03-10 14:05:24 has no hits.

BO35307.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:38 Download gff for BO35307.complete
Subject Subject Range Query Range Percent Splice Strand
CG34120-RB 197..943 17..765 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:38 Download gff for BO35307.complete
Subject Subject Range Query Range Percent Splice Strand
X 21133187..21133270 462..545 100 -> Plus
X 21133328..21133468 546..686 100 -> Plus
X 21133548..21133624 687..765 97   Plus
X 21132451..21132752 17..318 100 -> Plus
X 21132805..21132947 319..461 99 -> Plus

BO35307.pep Sequence

Translation from 16 to 781

> BO35307.pep
MRVHLNGREVRELLRKDLLVRWRQKGLSLILLAWPVMVFMLLYLIRLKYG
SEELEACQYPTRLLPTKNQVVPAAFSYICSIENRCQPAHPYEEYSHWKEA
PLHSVIDVVNAFVTDERLHKAVVELAEKANFVSAITTLITSDRFDIIRSN
ISEIISLVPEIERRMNYSFDIKHLFSNRETFVKLGVLLCGHPFPNTDTIP
LVNEILESEDFSQANDAEIDAMPTRRRRRYEDLPTDWRPSEHDQIFFNIA
SFLDH

BO35307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG34120-PB 249 CG34120-PB 1..249 1..249 1300 100 Plus
CG34120-PC 1997 CG34120-PC 1..242 1..242 1250 98.8 Plus
CG34120-PE 1998 CG34120-PE 1..242 1..242 1250 98.8 Plus
CG34120-PD 1981 CG34120-PD 1..234 1..233 1165 97 Plus