BO35313.complete Sequence
1000 bp assembled on 2015-03-10
GenBank Submission: KX798620
> BO35313.complete
GAAGTTATCAGTCGACATGTCGACACCGAATTTTCTCTTGAGCAATGGTA
AAAATATGCCTATGTTGGGTCTCGGAACTTGGCGGAGCCCGCCGGAAGTG
GTGACCCAAGCAGTAAAGGATGCCATTGATATAGGCTATCGCCATTTTGA
CTGCGCTCATATCTATGGCAATGAGGCGCAAGTGGGAGCTGCTCTCCGGG
AGAAAATGGACGAGGGAGTGGTCACACGAGATGAACTCTTCATCACGAGC
AAACTGTGGAACACACACCACAAGCCGGATTTGGTGCGCCCGGCATGTGA
GACAAGCATAAGGAACTTGGGAGTCAAGTACCTAAACCTCTACCTGATGC
ACTGGCCCATGGCCTACAAGTCGGGCAGTGACAACCTATATCCCACGTGT
CCGGACACCAATAAGGCCGCATTCGAGGACATCGACTATGTGGACACGTG
GCGTGCAATGGAGAATCTGGTGGACGAGGGTCTGTGCCAGGCCATCGGTG
TGTCTAACTTCAATGAGCAGCAGATGAATAGACTTCTGAGTGTGGCCAAA
CTTAAGCCGGTAGTTCTACAAATCGAGTGCCACCCGTACCTTAGTCAGAA
GCCATTGATTACGCTGTGCTATGACAATGCCATTGCTGTGACCGCCTACA
GCTGCCTGGGATCGGGACATACGCCCTACGAGAAGCCCGGCGCTTATCCA
CTGCTCCAGCACCCGACCATCTTGGCTATAGCTGAGAAATACGAAAGGAC
TGCGGCACAGGTGCTCCTACGCTTTCAGACACAATCGGGTATAATTGTCA
TCCCAAGATCAGTAAGCAAACAGCACATGTTGGACAACTTTAAGCGAATC
TGGGACTTTGAGTTGGCCGTCGATGACATACAGGCCATTAACGAATTGGA
CTGCAATGGGCGTTTTATGACCATGAAGGCGGCCTATGGACATCCTCATC
ATCCCTTTGAACCCAAAGCCAAAGTGGATAATGCAAGCTTTCTAGACCAT
BO35313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6083-RA | 969 | CG6083-PA | 1..966 | 17..982 | 4695 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6083-RA | 1308 | CG6083-RA | 140..1107 | 15..982 | 4705 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11624850..11625553 | 931..228 | 3430 | 99.1 | Minus |
| 3L | 28110227 | 3L | 11625617..11625760 | 228..85 | 705 | 99.3 | Minus |
| 3L | 28110227 | 3L | 11625916..11625986 | 85..15 | 355 | 100 | Minus |
| 3L | 28110227 | 3L | 11624729..11624780 | 982..931 | 230 | 96.2 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:05:29 has no hits.
BO35313.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:41 Download gff for
BO35313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6083-RA | 142..1107 | 17..984 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:41 Download gff for
BO35313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11625617..11625759 | 86..228 | 99 | <- | Minus |
| 3L | 11625916..11625984 | 17..85 | 100 | | Minus |
| 3L | 11624727..11624780 | 931..984 | 92 | <- | Minus |
| 3L | 11624851..11625552 | 229..930 | 99 | <- | Minus |
BO35313.pep Sequence
Translation from 16 to 1000
> BO35313.pep
MSTPNFLLSNGKNMPMLGLGTWRSPPEVVTQAVKDAIDIGYRHFDCAHIY
GNEAQVGAALREKMDEGVVTRDELFITSKLWNTHHKPDLVRPACETSIRN
LGVKYLNLYLMHWPMAYKSGSDNLYPTCPDTNKAAFEDIDYVDTWRAMEN
LVDEGLCQAIGVSNFNEQQMNRLLSVAKLKPVVLQIECHPYLSQKPLITL
CYDNAIAVTAYSCLGSGHTPYEKPGAYPLLQHPTILAIAEKYERTAAQVL
LRFQTQSGIIVIPRSVSKQHMLDNFKRIWDFELAVDDIQAINELDCNGRF
MTMKAAYGHPHHPFEPKAKVDNASFLDH
BO35313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6083-PA | 322 | CG6083-PA | 1..322 | 1..322 | 1730 | 100 | Plus |
| CG6084-PA | 316 | CG6084-PA | 1..312 | 1..315 | 890 | 53.3 | Plus |
| CG6084-PC | 350 | CG6084-PC | 38..346 | 4..315 | 859 | 52.2 | Plus |
| CG6084-PD | 316 | CG6084-PD | 1..312 | 1..314 | 847 | 52.1 | Plus |
| CG6084-PB | 350 | CG6084-PB | 38..346 | 4..314 | 816 | 51 | Plus |
