BO35315.complete Sequence
1294 bp assembled on 2015-03-10
GenBank Submission: KX800097
> BO35315.complete
GAAGTTATCAGTCGACATGTCGAAGGCTGTGAATAACATGAGCATGGGCG
ACGTGGAGCCGCAGGAGAGGATGAAGCACCTGTCGCACTGCGGCAACCTG
ATCGAGGTGGACAAGAACATGCCAGTCACGCGGTACTACCGCTCTGGCAC
CGAGATGCTGCGCATGGCCAATGTTTACCTGCGGGAGGGCAACCACGAGA
ACGCATTCATCCTGTACTTGCGCTACATGACCCTCTTCATCGAGAAGATC
CGCCAGCACCCGGATTATGGCAGCGTCAAGGCCGAGGTGCGGGATATTAA
CAGGAAGATTAAGGACGAGATTATGCCCACGACGGAGAAACTGAGAGCCA
AGCTACTAACGCACTACCAAAGGGAGTACGAGCAGTTCCTGGCCAGCAAG
GAGGCGGAACGAGTCAAGGAACTGGAACGCGAACGGGAACGGGAAAGGGA
ACGTCAGCGGCAGAAGGAAAGGGAGAAGGCAGGTTCAAGTGCTATCCCAT
CCCTCATCCCGGCCAATTTGCACGTGCTCATCGACGAAGGCAACCAGCCA
TCGGCTCCAGACCTGGGCCTGCTTGACCAGGTGGTCTATCCCAATGACTT
TCCCACGGGCGCCAATCGCAGCCTGCCGGGATCGGGACTCCTGCTGCCCG
CTGCCAGCGAAGCAGCCGCCGATAAGACAACCAACTCCAAGCCAAGCTTC
GATCGCAATCAGAAGCCATCTTACAACCGCACAGATTCTCTGCTGGCTGG
CTCTTTGCGCCTTGTTTACGTGCCCGGGGACACCATGGAGGTGTTTCTGA
AGCTGGCCCTTGCCAACACCTCGAAAAACATCGAGACATGCGGCGTACTG
GCTGGTCATCTGTCCCAGAACCAGCTGTACATCACTCACATCATTACGCC
GCAACAGCAAGGAACTCCGGACAGCTGCAACACGATGCACGAGGAGCAGA
TATTCGATGTGCAGGACCAGATGCAGCTGATTACGCTGGGATGGATTCAT
ACTCATCCAACTCAGACTGCGTTTTTGTCCTCCGTTGACCTGCATACGCA
TTGCTCCTATCAGATTATGATGCCCGAAGCCTTGGCCATTGTGTGCGCGC
CTAAGTACAATACTACTGGTTTCTTTATACTCACGCCACATTACGGTCTG
GACTACATAGCCCAATGTCGCCAGTCGGGCTTTCATCCGCATCCTAATGA
CCCGCCGCTCTTCATGGAGGCGCAGCACATCCGAATGGATAACCAGGCCA
AAATCAAGGTCATCGATCTGCGGAGAGCAAGCTTTCTAGACCAT
BO35315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2224-RB | 1263 | CG2224-PB | 1..1260 | 17..1276 | 6150 | 99.2 | Plus |
| CG2224-RA | 1263 | CG2224-PA | 1..1260 | 17..1276 | 6150 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2224-RB | 2140 | CG2224-RB | 259..1519 | 16..1276 | 6155 | 99.2 | Plus |
| CG2224-RA | 1620 | CG2224-RA | 259..1519 | 16..1276 | 6155 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30458271..30458823 | 684..132 | 2660 | 98.7 | Minus |
| 3R | 32079331 | 3R | 30457463..30457778 | 1000..685 | 1565 | 99.7 | Minus |
| 3R | 32079331 | 3R | 30457062..30457224 | 1276..1114 | 815 | 100 | Minus |
| 3R | 32079331 | 3R | 30458924..30459042 | 134..16 | 595 | 100 | Minus |
| 3R | 32079331 | 3R | 30457292..30457404 | 1113..1001 | 535 | 98.2 | Minus |
Blast to na_te.dros performed 2015-03-10 14:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2094..2170 | 398..473 | 120 | 66.7 | Plus |
BO35315.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:42 Download gff for
BO35315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2224-RB | 260..1519 | 17..1278 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:42 Download gff for
BO35315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30457060..30457224 | 1114..1278 | 98 | <- | Minus |
| 3R | 30457292..30457404 | 1001..1113 | 98 | <- | Minus |
| 3R | 30457463..30457778 | 685..1000 | 99 | <- | Minus |
| 3R | 30458271..30458822 | 133..684 | 98 | <- | Minus |
| 3R | 30458926..30459041 | 17..132 | 100 | | Minus |
BO35315.pep Sequence
Translation from 16 to 1294
> BO35315.pep
MSKAVNNMSMGDVEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRM
ANVYLREGNHENAFILYLRYMTLFIEKIRQHPDYGSVKAEVRDINRKIKD
EIMPTTEKLRAKLLTHYQREYEQFLASKEAERVKELERERERERERQRQK
EREKAGSSAIPSLIPANLHVLIDEGNQPSAPDLGLLDQVVYPNDFPTGAN
RSLPGSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDSLLAGSLRLV
YVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGT
PDSCNTMHEEQIFDVQDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQI
MMPEALAIVCAPKYNTTGFFILTPHYGLDYIAQCRQSGFHPHPNDPPLFM
EAQHIRMDNQAKIKVIDLRRASFLDH
BO35315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2224-PB | 420 | CG2224-PB | 1..420 | 1..420 | 2201 | 100 | Plus |
| CG2224-PA | 420 | CG2224-PA | 1..420 | 1..420 | 2201 | 100 | Plus |
