BO35329.complete Sequence
1201 bp assembled on 2015-03-10
GenBank Submission: KX799834
> BO35329.complete
GAAGTTATCAGTCGACATGGACAACCTAAATTTATACGACGTTCTTAAAG
TGGCTCCGGATGCAACTGATGAGGAAATAAAAAAGAACTACCGAAAATTG
GCAAAAGAGTTCCATCCAGACAAGAATCCCGATGCGGGCGACAAGTTTAA
AGAAATATCCTTCGCCTACGAAGTGCTGTCCGATCCCGAGAAGCGGCGCA
TCTACGACCGATATGGATTGAAGGGCCTGCAAGAGGGCGCCGAGGGATTC
TCTGATGCCTCCGAATTCTTCGCCCAGTGGTTCCCCTTCGATCGAGTCTC
GTCCGAAGGTCGGGGCAGGCGCAATGGCAAAGTCGTGGTAAAAGTGGAGC
TGACCCTGGAGGAGATCTACGTCGGCGGCATGAAGAAGAAGGTGGAGTAC
AATCGCCAGAAGCTGTGCTCCAAGTGTAACGGCGATGGCGGTCCCAAGGA
AGCGCACGAGAGCTGCGAGACCTGCGGCGGAGCTGGACGAGCGGCCGCAT
TTACCTTCATGGGTCTCAGCCCCTTCGATACGACCTGTCCGACTTGCGAT
GGCAGGGGCTTCACCATAAGGGACGACAAGAAGTGCAGTCCCTGCCAGGG
CAGTGGTTTCGTAGAGCAGAAGATGAAGCGGGACCTGGTTGTGGAGCGAG
GAGCACCGCACATGCTAAAAGTTCCCTTCGCAAATGAGGGCCACCAAATG
CGAGGCGGCGAATTTGGGGATCTGATTGTAGTCATCTCCCAGATGGAACA
TCCAATCTTTCAGCGCCGCCATGCCAATCTGTACATGCGAGACCTGGAGA
TCAACATCACGGAGGCCTTGTGCGGCTACTCGCATTGTTTCAAGCACTTG
GATGGACGAAACGTCTGTCTGCGCACGTACCCTGGTGAAGTGTTGCAGCA
CAACCAGATCAAGATGGTGCGAGGCAGCGGTATGCCTGTTTTTAACAAGG
CCACCGACAGTGGAGATCTCTACATGAAGTTTAAGGTTAAGTTTCCGGAC
AACGACTTTGCCACGGCACCGCAGTTGGCCATGCTGGAGGACTTACTCCC
TCCCAGACAGCCGATAGTGATCCCAAAGAACGCCGAGGAAGTGCAAATGA
CGGACTATAAGCCGCAGCCACGACAGCAGGAAGACGAGGACGGACAGTCG
TCTCACTTTGAGGGCGTACAGTGCCAGACGGCTGCAAGCTTTCTAGACCA
T
BO35329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DnaJ-H-RC | 1323 | CG9828-PC | 1..1167 | 17..1183 | 5820 | 99.9 | Plus |
| DnaJ-H-RA | 1170 | CG9828-PA | 1..1167 | 17..1183 | 5820 | 99.9 | Plus |
| DnaJ-H-RB | 1170 | CG9828-PB | 1..1167 | 17..1183 | 5820 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DnaJ-H-RC | 1636 | CG9828-RC | 126..1292 | 17..1183 | 5820 | 99.9 | Plus |
| DnaJ-H-RA | 1533 | CG9828-RA | 126..1292 | 17..1183 | 5820 | 99.9 | Plus |
| DnaJ-H-RB | 2035 | CG9828-RB | 628..1794 | 17..1183 | 5820 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13163553..13164204 | 1183..532 | 3245 | 99.8 | Minus |
| 2L | 23513712 | 2L | 13164316..13164764 | 532..84 | 2245 | 100 | Minus |
| 2L | 23513712 | 2L | 13164825..13164893 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:05:37 has no hits.
BO35329.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:46 Download gff for
BO35329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DnaJ-H-RC | 126..1292 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:46 Download gff for
BO35329.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13163551..13164203 | 533..1185 | 99 | <- | Minus |
| 2L | 13164316..13164762 | 86..532 | 100 | <- | Minus |
| 2L | 13164825..13164893 | 17..85 | 100 | | Minus |
BO35329.pep Sequence
Translation from 16 to 1201
> BO35329.pep
MDNLNLYDVLKVAPDATDEEIKKNYRKLAKEFHPDKNPDAGDKFKEISFA
YEVLSDPEKRRIYDRYGLKGLQEGAEGFSDASEFFAQWFPFDRVSSEGRG
RRNGKVVVKVELTLEEIYVGGMKKKVEYNRQKLCSKCNGDGGPKEAHESC
ETCGGAGRAAAFTFMGLSPFDTTCPTCDGRGFTIRDDKKCSPCQGSGFVE
QKMKRDLVVERGAPHMLKVPFANEGHQMRGGEFGDLIVVISQMEHPIFQR
RHANLYMRDLEINITEALCGYSHCFKHLDGRNVCLRTYPGEVLQHNQIKM
VRGSGMPVFNKATDSGDLYMKFKVKFPDNDFATAPQLAMLEDLLPPRQPI
VIPKNAEEVQMTDYKPQPRQQEDEDGQSSHFEGVQCQTAASFLDH
BO35329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DnaJ-H-PA | 389 | CG9828-PA | 1..389 | 1..389 | 2094 | 100 | Plus |
| DnaJ-H-PB | 389 | CG9828-PB | 1..389 | 1..389 | 2094 | 100 | Plus |
| DnaJ-H-PC | 440 | CG9828-PC | 1..389 | 1..389 | 2094 | 100 | Plus |
| Droj2-PE | 403 | CG8863-PE | 8..380 | 7..374 | 610 | 35 | Plus |
| Droj2-PD | 403 | CG8863-PD | 8..380 | 7..374 | 610 | 35 | Plus |
