Clone BO35334 Report

Search the DGRC for BO35334

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:34
Vector:pDNR-Dual
Associated Gene/TranscriptCG10793-RA
Protein status:BO35334.pep: Imported from assembly
Sequenced Size:1471

Clone Sequence Records

BO35334.complete Sequence

1471 bp assembled on 2015-03-10

GenBank Submission: KX796091

> BO35334.complete
GAAGTTATCAGTCGACATGAAGACCCAAGGAAAATACGGAGTGACTGCCA
CGGCGGCTGCTCAGATTCTTTGCGAGGATGTTAGAAATTTTAGCACACGT
CGCCGCAATATTCTCTACCTAATGCACCGATATCTGGTGGAGAATGGATA
CTATGCGAGTGCCGAGTCCTTGAAAAGCGAAGGACGTCTAACCGACGAAT
ACGAACTGTGCGACAATATCGATCTGGATGCCATGTACCTGGAATATGCC
AGCTTTTATAATATGAAATTTGGTAAATATCCGAAAATTCTTAAAAAAGT
CGGAGCCAAAATTAAGGTGGAAATGGGTGGTGGAAAGGCGCATGAGAAGA
CGCCGGCTAAGGAATTGCCCAAGAAACCACCGACTACGGACGCTTCTCTG
GCCAATTGGCACATAGGTGTCGGCGCAGCCACACAGGCGTTGAGTAACGA
ACAGCCGTTGCAGATAAAGAAAATGGAAACAGCAACGGAATCGAATGGCC
AGGATAATGCTTGTGAAATCGAACATGTCCATTTGGGTGGTGATGATGTT
CTCTTCTCCTCCTTGGAATGGCAATCTCTGGCGGAATTGGTCAAGACATC
GATATTGCAGGAAAATATCAAGATCAAGTGGTCGGATGTTTGCGGAAATC
AGCGAGCAATTGAGTTGATCAAAGAGGCGGTACTAACGCCCATTGAGTTT
CCTCAATTATTCGCACATGGCCTGAAACCCTGGAGATCCTTACTTCTCCA
CGGACCACCGGGCAGTGGAAAAACCCTTCTCGCCAAGGCTTTGTATTCCG
AGACACAGGGTCAAGTGACATTCTTTAATATAACTGCCAGCATTATGGTC
AGCAAGTGGCGGGGTGAATCCGAAAAGATACTGCGAGTTCTCTTTCACAT
GGCAGCAAAACGAGCACCATCCGTAATTTTCTTCGATGAAATCGAAAGCT
TGACCTCGAAAAGGGACAGGGCAACGGATCACGAAAGTTCCAAACGCTTT
AAGAACGAACTTTTGCAACTTTTGGACGGTATGGAGCACTCTCTGAACGG
CGTTTTCGTCTTGGCCAGCACCAATTTGCCCTGGGACATTGATGAGGCCT
TTTTGCGGCGTTTCGAAAAGAAACTGCTTGTCCAGCTGCCCAATGCGGCG
GAAAGAAGTTGCTTGATTAACCGACTTTTGGGCAGCAGCATATCGCTGAA
TCCACGACTACTCGAGCAGCTGGTGGAGATCTCCGATCATTTTACCGGCG
ACGAAATACGTCTGGCTTGCAAGGAGATTAGCATGCATCGTGTGCGTTGT
GCCACCAAGATTGGTGATCGATCAATCGGCTTGCTTGCTAAGGAATCGCC
GGCAGCCATCGAAGCGAATGTGGAGAAGGCCTTCCGGCAAGTGCGACCTT
TGGGCCAGAAGCTGTTGGCCAAACACGAGCAGTGGCAGCAGGAAAACGGC
TCGGCAAGCTTTCTAGACCAT

BO35334.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10793-RA 1440 CG10793-PA 1..1437 17..1453 7080 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10793-RA 1659 CG10793-RA 123..1559 17..1453 7080 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3314844..3316280 1453..17 7080 99.5 Minus
Blast to na_te.dros performed on 2015-03-10 14:05:34 has no hits.

BO35334.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:44 Download gff for BO35334.complete
Subject Subject Range Query Range Percent Splice Strand
CG10793-RA 123..1559 17..1455 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:44 Download gff for BO35334.complete
Subject Subject Range Query Range Percent Splice Strand
X 3314842..3316280 17..1455 99   Minus

BO35334.pep Sequence

Translation from 16 to 1471

> BO35334.pep
MKTQGKYGVTATAAAQILCEDVRNFSTRRRNILYLMHRYLVENGYYASAE
SLKSEGRLTDEYELCDNIDLDAMYLEYASFYNMKFGKYPKILKKVGAKIK
VEMGGGKAHEKTPAKELPKKPPTTDASLANWHIGVGAATQALSNEQPLQI
KKMETATESNGQDNACEIEHVHLGGDDVLFSSLEWQSLAELVKTSILQEN
IKIKWSDVCGNQRAIELIKEAVLTPIEFPQLFAHGLKPWRSLLLHGPPGS
GKTLLAKALYSETQGQVTFFNITASIMVSKWRGESEKILRVLFHMAAKRA
PSVIFFDEIESLTSKRDRATDHESSKRFKNELLQLLDGMEHSLNGVFVLA
STNLPWDIDEAFLRRFEKKLLVQLPNAAERSCLINRLLGSSISLNPRLLE
QLVEISDHFTGDEIRLACKEISMHRVRCATKIGDRSIGLLAKESPAAIEA
NVEKAFRQVRPLGQKLLAKHEQWQQENGSASFLDH

BO35334.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG10793-PA 479 CG10793-PA 1..479 1..479 2462 100 Plus
kat-60L1-PF 605 CG1193-PF 299..604 180..479 525 38.8 Plus
kat-60L1-PA 605 CG1193-PA 299..604 180..479 525 38.8 Plus
kat-60L1-PH 609 CG1193-PH 303..608 180..479 525 38.8 Plus
kat-60L1-PD 609 CG1193-PD 303..608 180..479 525 38.8 Plus