BO35338.complete Sequence
1642 bp assembled on 2015-04-29
GenBank Submission: KX793990
> BO35338.complete
GAAGTTATCAGTCGACATGAGTTCAAGCCAGAGAAATGTACTGATGGAGG
AGGATACATCTGAGGGTATAATTAACCCAGATGGCTTAGCCAATGACCTT
ATAAAGGGGATTTTCAAAAATTATCCTGAACGAGGTCTCCACGAAGAGTC
ATCCTTCAGTGTGTCTTCAGGTTCCCTACCGAAGTGCAAGAGTAAAATTG
ATAGTCGTCTAGATTACTGGAAGAACATGCTTATTCAAAGACGGGCGTTA
CAAGAGAGACTACGAGTCCAACTGGGCAGGACTCCAGAGGATATGATCCT
TAATCAGCAGGGAAAAATAGTGAAACGCTCCATAGGAGGCTGCTTGGAGA
CCGTAGGACTACCCAGCTATGCAGCTGCGGAAATGTTGGGGAGTAAAGAG
CTAAAAAATGAGGAAGCGGATATTATGCCTGAGCTACCACCCCAAATCCG
TAGTTTGGAGGTGGTGGGCAGGAAGCTCCAGACCCATTGCTCGAAAATGT
CCAATCAGGTGGGCCGTACAGAGGCTTTAGGCGCCAGTGACGCTGTCGAG
GTGGCCCAATCTACAGTGACGATCCAACAACCGGTTAGCGGACTGGGCGT
TCGCATCAATGGAATTAATTTCTGGCCGCATAATCCAGAGTTCTCTCCCA
CCATTGACCGAACCTTTGCTAGTCAGCCCTTTCAACGTCACCTGCGACCC
ATCATACGCATCGAAAACATTGGAAGTCAGGAGCTGAGCCTACAATGGAA
GAAGGTTAATTTCTTCTCAAACAACAATACTCTCATGGAAGCCGATCCGG
ATGACTTCGTTTTTGATGTGGACCCATTTGTGCTTCTTCCGGGCGAGTTT
CGGGATGTTACGGTTCTCTATCAGCCGCGCTGCGTGGCCATTGTAAAGCA
GCGCTGGCTGCTATTGACGTGTCCACGCATCTTTTTCTGTCGCCCTTCTG
GTTTCACATTAAATTTAAACGGTCGTTGTACTCCCCCCAAAGAATACTTG
GACCGCCTCAAAATGGAGAAGCTTCAGGTGTTGTCGTATGAGGCGCCGGT
TCCTCTGCAACAGCAGACAGTGTCCCTCTGTCCATATGAACGGGAGCTGG
AGGAGCGGGAGGTTTTTAACCGGCGGAACAGAAGCTTCCAGTGCCTGACT
CATGAAGATTTTGAGCGCTTAATGGCGTTCTACAAACGGGTGAGGCCTCC
AAATTCATATGTTTCTTCCTGGGACTACAGTGTGCATTCGCTAATCCATT
TGGTGTGTAATAGTCGTGACATTCGGCAGCGCATAAAGCACTCTTCGGAA
CTGGCAAACTTGCTAGACGGCTTGCGGAGAACGTGTCCAATGCCACTGGT
TAAAGCGGACTCAGTTAATAGGCTGTGGAACCGCAATCAATCAAAAATGA
TTTATGTACGTGGAATACTAGGTAGTTTATTGGAAGAATGGGAACAGAGG
GTGCATTTCCTTAGGTCGAGGGTCGCCCACGAAGACTGTAGTTCCAGTTT
GCAGAAGGCCAATAGCATTCTCCGTTCAAAGCCATTTATGGACTCAATCT
GTATGCAGTTGCACGGATTGATTTGCAGAGCGGTCGAGGATATTGCGTCG
GTGATCGAGAGCACCGTCCAGATAGCAAGCTTTCTAGACCAT
BO35338.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-04-29 20:18:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30385-RA | 1611 | CG30385-PA | 1..1608 | 17..1624 | 7980 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30385-RA | 1695 | CG30385-RA | 35..1642 | 17..1624 | 7980 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7181360..7182967 | 17..1624 | 7980 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-04-29 20:18:15 has no hits.
BO35338.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:54 Download gff for
BO35338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30385-RA | 35..1642 | 17..1626 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:54 Download gff for
BO35338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7181360..7182967 | 17..1626 | 99 | | Plus |
BO35338.pep Sequence
Translation from 16 to 1642
> BO35338.pep
MSSSQRNVLMEEDTSEGIINPDGLANDLIKGIFKNYPERGLHEESSFSVS
SGSLPKCKSKIDSRLDYWKNMLIQRRALQERLRVQLGRTPEDMILNQQGK
IVKRSIGGCLETVGLPSYAAAEMLGSKELKNEEADIMPELPPQIRSLEVV
GRKLQTHCSKMSNQVGRTEALGASDAVEVAQSTVTIQQPVSGLGVRINGI
NFWPHNPEFSPTIDRTFASQPFQRHLRPIIRIENIGSQELSLQWKKVNFF
SNNNTLMEADPDDFVFDVDPFVLLPGEFRDVTVLYQPRCVAIVKQRWLLL
TCPRIFFCRPSGFTLNLNGRCTPPKEYLDRLKMEKLQVLSYEAPVPLQQQ
TVSLCPYERELEEREVFNRRNRSFQCLTHEDFERLMAFYKRVRPPNSYVS
SWDYSVHSLIHLVCNSRDIRQRIKHSSELANLLDGLRRTCPMPLVKADSV
NRLWNRNQSKMIYVRGILGSLLEEWEQRVHFLRSRVAHEDCSSSLQKANS
ILRSKPFMDSICMQLHGLICRAVEDIASVIESTVQIASFLDH
BO35338.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-04-29 20:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30385-PA | 536 | CG30385-PA | 1..536 | 1..536 | 2793 | 100 | Plus |
| CG33140-PA | 720 | CG33140-PA | 58..715 | 24..533 | 491 | 25.8 | Plus |
| CG11060-PA | 706 | CG11060-PA | 328..704 | 194..533 | 358 | 28.4 | Plus |
| CG30384-PA | 708 | CG30384-PA | 212..705 | 106..533 | 353 | 25.2 | Plus |
