BO35346.complete Sequence
745 bp assembled on 2015-03-10
GenBank Submission: KX797636
> BO35346.complete
GAAGTTATCAGTCGACATGACGGCCACACAAAAACTCCGAACATCGACGA
TGGAGTGGTGCGATCGAAACTCGAGACCCAAGTCATCGATACCCAATCCC
GCCGTTCGTCCGGAACCTACTAGATGGCAAAAGCCAGGACCGATGAGCCG
GAATGAGTGGGCCAACTTCCACAAAACTTACCAAGTAGATACAATGGCCT
ATAACCAAAGATTGCAGGGTGGAAAGCAAAAGCGAGATAGCAAACCCATT
GTTGAGAAGCCTTCCTTGCCAGAAGTTAGTCCTCTAACGGAAAACCAATA
TCGTCTGAGTATGCCACGCTGGCAGCGCCAAAAGTATATCCCACCGCCAC
CGGAACAGTTTCCCTATCGACCACAAATCATCGGCCAAAGTGCTCCTCCA
CGTCCGGAACATGGTAGACCAGTTCAAAGGCCAGTGGTTCCGTGCTGCTT
TCAGCACGTGGATCTCGAGAACGAGTTTTGGTCTAACTTGCGGTTTCCTG
TGTCGCGGAAAGCACTCACAGCCCGTCCCAGTAAGAAGATCTATGAACTG
GCCCGGCCACGACAATATCCACAGAAATCCCACTGCCCGGTGCCCAGCAG
CAACGAGGGGGAGGTGCCCAGACTTCGGAAAATGACCCCGCGGGAGTGGC
GACATCATCTGCAGCGACTAGAGTTCCTAGCAAAACCAAATCCTCGGGTT
TTGGCCGATTTACTGTGCTGCTGTCACGCAAGCTTTCTAGACCAT
BO35346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31245-RA | 714 | CG31245-PA | 1..711 | 17..727 | 3525 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31245-RA | 965 | CG31245-RA | 178..888 | 17..727 | 3525 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19376272..19376761 | 727..238 | 2435 | 99.8 | Minus |
| 3R | 32079331 | 3R | 19376825..19377048 | 240..17 | 1105 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:05:47 has no hits.
BO35346.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:51 Download gff for
BO35346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31245-RA | 178..888 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:51 Download gff for
BO35346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19376270..19376758 | 241..729 | 99 | <- | Minus |
| 3R | 19376825..19377048 | 17..240 | 99 | | Minus |
BO35346.pep Sequence
Translation from 16 to 745
> BO35346.pep
MTATQKLRTSTMEWCDRNSRPKSSIPNPAVRPEPTRWQKPGPMSRNEWAN
FHKTYQVDTMAYNQRLQGGKQKRDSKPIVEKPSLPEVSPLTENQYRLSMP
RWQRQKYIPPPPEQFPYRPQIIGQSAPPRPEHGRPVQRPVVPCCFQHVDL
ENEFWSNLRFPVSRKALTARPSKKIYELARPRQYPQKSHCPVPSSNEGEV
PRLRKMTPREWRHHLQRLEFLAKPNPRVLADLLCCCHASFLDH
BO35346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31245-PA | 237 | CG31245-PA | 1..237 | 1..237 | 1319 | 100 | Plus |
| CG31404-PA | 274 | CG31404-PA | 51..268 | 14..227 | 295 | 36 | Plus |
| CG3581-PA | 253 | CG3581-PA | 21..245 | 10..227 | 279 | 33.5 | Plus |
