Clone BO35350 Report

Search the DGRC for BO35350

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG14011-RA
Protein status:BO35350.pep: Imported from assembly
Sequenced Size:1198

Clone Sequence Records

BO35350.complete Sequence

1198 bp assembled on 2015-03-10

GenBank Submission: KX797075

> BO35350.complete
GAAGTTATCAGTCGACATGGCATTTCTGGGCAAAGTCAACAGTCAGGGAA
CCCTTATCGACCATGAACTATTCTGCATGACCCAGCCCAGCCAGCAGGAT
TCAGATGGCCAAGCCAGAGAGATGGGGGCTCGTGTACTGCTACCGCGAAG
AAAGGGTTCCAGGACTTTCATCAAGACCTGTGACAAGGACAGCCTCGTGC
GCTCTATGGGTAGCCCCAGCACAGTGCGCTACGTGGGCAGCTCCGAGTCG
TCCAGTGAAGTCAACTCATTGGACGAGACGGAGACCTCCACTCTGCGCTG
CTGCTCGGATTTGTCCCTGGGCACCCTGAAGTCGACCAAGACAATTGAGG
GGCCCCGCGTCGGTGAACTGGGAGAGGATATCGAGCTGCAGACGGAGTCG
GAGACGGTCTGCCTGCATCTGGGCAGTCCCAGCAGTAGCACCAGCACGGA
CCGGAGTAGCTGCAGCAGCCGATCCTGCCCCTCTTCCCGCAGCGGCAACA
ATTCCAGCGACAAGGACTCGACGACCTCGATGTGCAGCTGGGAGGAGGCC
ATGTCCCGGGACGACAGCATGCTGGCCCCGCTCGAGTTGCCACTAAGCCA
CAGCCTGCCCTCGCTGCGCCTGGGATCGAGCGTAGGATCGCCGCCCCTTA
CCTACACCCGCCGCATCGAACCGCTCCATATCCGGCGGTCCGCCGGTGAG
GCCTACGAGAACTGGCTGTCCGGCAAGCAACGCCAGTGCCAGTACAAGTT
GCAGGCGCAGCAGGCCGAGAGAGAGGCGCAGCGGCAGCGAACGGAGCTGA
GGCAGCGGCTCGCCAAGGAGAAGTACGAGCAGTGGTGTCAGCAGAAGGCG
CAGCAGACCACCAGTACCGCCAAGCTCACCAAGCCCGACCGTTCTGCCCA
GCTGCCGCCGCAAAAGAATATGGCGTCTGTGCAACATCACCTGCAGGAGT
GGGAGCTGCACAAGCTTAGGCTGCTCGAACAGCGTCGCCTCGAGCAGCGG
AATGCCGAGCGGCGGCGCCAGGAGGAGAAGGCCGCCCGCCGCTCGCAGGC
GGAAGAGGCCTTCAGTCGGTGGATGAGCAACGTGGCCCAGAGGCCCAAGC
CCGTCCCCTCCAGCCAGGGAATGAAGTCGCTGCGCGGCACCGTTTCCGAC
ATCTTTATAAACCCCAAGCAGTGGGTGAATGCAAGCTTTCTAGACCAT

BO35350.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14011-RC 1167 CG14011-PC 1..1164 17..1180 5820 100 Plus
CG14011-RB 1167 CG14011-PB 1..1164 17..1180 5820 100 Plus
CG14011-RA 1167 CG14011-PA 1..1164 17..1180 5820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:06:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14011-RC 1474 CG14011-RC 163..1326 17..1180 5820 100 Plus
CG14011-RB 1477 CG14011-RB 166..1329 17..1180 5820 100 Plus
CG14011-RA 1482 CG14011-RA 171..1334 17..1180 5820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5579728..5580891 1180..17 5820 100 Minus
Blast to na_te.dros performed 2015-03-10 14:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1096..1144 423..471 119 71.4 Plus

BO35350.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:06 Download gff for BO35350.complete
Subject Subject Range Query Range Percent Splice Strand
CG14011-RC 163..1326 17..1182 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:06 Download gff for BO35350.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5579726..5580891 17..1182 99   Minus

BO35350.pep Sequence

Translation from 16 to 1198

> BO35350.pep
MAFLGKVNSQGTLIDHELFCMTQPSQQDSDGQAREMGARVLLPRRKGSRT
FIKTCDKDSLVRSMGSPSTVRYVGSSESSSEVNSLDETETSTLRCCSDLS
LGTLKSTKTIEGPRVGELGEDIELQTESETVCLHLGSPSSSTSTDRSSCS
SRSCPSSRSGNNSSDKDSTTSMCSWEEAMSRDDSMLAPLELPLSHSLPSL
RLGSSVGSPPLTYTRRIEPLHIRRSAGEAYENWLSGKQRQCQYKLQAQQA
EREAQRQRTELRQRLAKEKYEQWCQQKAQQTTSTAKLTKPDRSAQLPPQK
NMASVQHHLQEWELHKLRLLEQRRLEQRNAERRRQEEKAARRSQAEEAFS
RWMSNVAQRPKPVPSSQGMKSLRGTVSDIFINPKQWVNASFLDH

BO35350.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14011-PC 388 CG14011-PC 1..388 1..388 1997 100 Plus
CG14011-PB 388 CG14011-PB 1..388 1..388 1997 100 Plus
CG14011-PA 388 CG14011-PA 1..388 1..388 1997 100 Plus
CG18266-PA 486 CG18266-PA 221..475 139..388 333 31.2 Plus
CG7251-PB 321 CG7251-PB 21..313 150..387 290 30.2 Plus