Clone BO35351 Report

Search the DGRC for BO35351

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG8102-RB
Protein status:BO35351.pep: Imported from assembly
Sequenced Size:1420

Clone Sequence Records

BO35351.complete Sequence

1420 bp assembled on 2015-03-10

GenBank Submission: KX798560

> BO35351.complete
GAAGTTATCAGTCGACATGTTGCGGCAGAAGCTTAAAAACTATTTACCGT
CTGTTTGGGAACAGCAACTGCGTCTCGTCCAAACTGCCAAGAAAGCGGGA
GGTAGCAAAAAGCTGGGTCCCGATAGGCCTCCCATTATCGATCCGCCCAA
GGGATATGAGCCCAATTGCAAGACCAAATTTGGTCCGCTGGACGATTGTG
ATCGTGTGTTTCAGAATCTCTATGGACGCCACGATTGGCGCTTGCATGGA
GCATGCCAACGTGGGGATTGGCATCGCACCGCTGAGTTGCTGGAGCAGGG
TCCCGAATGGATCATGAAGCAGTGGGAATTTCTACGCCAGACCAAGTCCG
AGAAGGTGCCCAAAATGGTCATCGTGAACTGTGCAGAGGGAGAGCCCGGA
ACCTGCAAGGACCGTGATATCCTGCGACATGAACCCCACAAACTGATAGA
AGGTATCCTTCTGGTAGGTGTGGCCATGGGATGCGGTAGAGCCATTGTGT
ACATTCGAAATCGCTTCTACAACGAGGCCTGCAACCTGCACTTTGCCTTG
GCGGAGGCCTATCATCATGGTTTGTTGGGAAACAGTGTCTGTGGCACGGG
CATCAAGTTCGATGTGATGGTCCAGCGTGGAGATCGGTACTTATGTGGCG
AGGAAACCGCCATGATCAACTGTTTGATGGGTAAACTGGGAAGACCACGA
CGTCGTCCGCCCTTCCTTACGGAAAAGGGCTACTTCGAGCATCCCTGTTT
GGTAATCAATGCCGAGTCGATTGCAGTAGTGCCCACCATTCTGCGAAGAG
GTTCACAGTGGTGGGCTGGATTGGGTCGCAGTTACAACACGGGAACCAAA
CTTTACTGTCTCAGCGGTCAGGTGAATAATCCCTGCACTGTGGAGGAAGA
AATGTCCATACCCCTGAAGGACCTTATAGAACGACATGCTGGTGGAGTAA
AAGGTGGTTGGGACAATCTCGCAGCAGTATTTCCAGGTGGTTTGTCCACG
CCATTGTTGGATCCATCAACTGCCGGAAAGGTTCTCATGGATTTCGATAG
TTTGACGGATGCAGGCAGTGGTTTCGGGTGCGGAGCGGTTATTGTGATGA
CCAAGGACTGTGATCCTCTGGCAATAATGTTGCGATCAATTCAGTTTTTC
GAAAAGCACACTTGCAAACAGTGCTCCTATTGTCGCGATGGTGCCATATG
GCTGCCGGAGATATTCGCCCGCTTTGTTAAGGGTCAGACACATCCCCACG
AGATCGATTGGACGCTGGTCATTGCCGATAAAATGAGGAATAGTAAGCCC
ATTTGCGCACTCGCTTATAGCCAAGTCAGCGTGGCCGAAAGTTTGGTGCG
AATGTTTAGCCGGAAGATCGAGGAACGCCTTTTAAAATATGCCAAGGGAT
CTGCAAGCTTTCTAGACCAT

BO35351.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:05:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG8102-RB 1389 CG8102-PB 1..1386 17..1402 6735 99.1 Plus
CG8102-RA 1446 CG8102-PA 362..1443 321..1402 5215 98.8 Plus
CG8102-RA 1446 CG8102-PA 1..306 17..322 1530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8102-RB 1509 CG8102-RB 48..1433 17..1402 6735 99.1 Plus
CG8102-RA 1566 CG8102-RA 409..1490 321..1402 5215 98.8 Plus
CG8102-RA 1566 CG8102-RA 48..353 17..322 1530 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:05:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15296840..15297921 1402..321 5215 98.8 Minus
2R 25286936 2R 15297977..15298282 322..17 1530 100 Minus
Blast to na_te.dros performed on 2015-03-10 14:05:07 has no hits.

BO35351.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:28 Download gff for BO35351.complete
Subject Subject Range Query Range Percent Splice Strand
CG8102-RB 53..1432 22..1404 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:28 Download gff for BO35351.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15296838..15297919 323..1404 98 <- Minus
2R 15297977..15298277 22..322 100   Minus

BO35351.pep Sequence

Translation from 16 to 1420

> BO35351.pep
MLRQKLKNYLPSVWEQQLRLVQTAKKAGGSKKLGPDRPPIIDPPKGYEPN
CKTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIM
KQWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKLIEGILLV
GVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDV
MVQRGDRYLCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAE
SIAVVPTILRRGSQWWAGLGRSYNTGTKLYCLSGQVNNPCTVEEEMSIPL
KDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGKVLMDFDSLTDAG
SGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPEIF
ARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRK
IEERLLKYAKGSASFLDH

BO35351.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG8102-PB 462 CG8102-PB 1..462 1..462 2512 100 Plus
CG8102-PA 481 CG8102-PA 1..481 1..462 2482 96 Plus
CG9140-PB 474 CG9140-PB 35..470 43..460 1127 49.8 Plus
CG9140-PA 474 CG9140-PA 35..470 43..460 1127 49.8 Plus
CG11423-PA 702 CG11423-PA 221..677 23..459 1108 47.9 Plus