Clone BO35352 Report

Search the DGRC for BO35352

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG42556-RA
Protein status:BO35352.pep: Imported from assembly
Sequenced Size:805

Clone Sequence Records

BO35352.complete Sequence

805 bp assembled on 2015-03-10

GenBank Submission: KX798910

> BO35352.complete
GAAGTTATCAGTCGACATGCAGGCTTTGCGAACGGTGATTCAAGGCCTCT
CGACGCGACATGGCCAGATTATATCCCACATACGGAGATCCAGTGGGAGC
AGTAGCTTTCCCGAGTTGGCATTTTTCGACGACCTCGACGACATGGAGCC
GGAGGATGAGGAGGGAGTGATGAATCATCAGTATCCCATCCTTCACAGCC
GCCACTCTGATCTGTTCTACATGCCAAACTGCGTGGGTCCAGCTTATCAG
GGTCTTATTTCTTCGTTGGATCAGCCTTATACCACCGACTGCTATATGGC
CGATGAACAGACTTTGGTGAAGGAAAACGATAGCATTCACGATACCATTC
TCGAGTCTTTGGTAGCACCTACCGAAATGTGTGTGGTGGCTTGCCCCAAG
TTGCTGTTGACCTACATGCGTCGCCTGTTCCAGCATCCGTATGCCCGCTT
TGGCAGCTCGATGAACTTCAGCATGATTGGATTGCGATTCAAGGACAAAG
ATGCTAACAAAGCCCTAACCTCTTTCGTTCACTTCGCCAGCTACAATTCG
CGTGAGATCATGGATAATGGTTATTGGGCGGACTTTATTAATCCCTTGAC
TGGTCGCGCTTACTACCGCGCCGCCCACTGTATCCGGAAGCAGGGCCTGG
AGGCCCAGCTCCTTGGCCGTGGCTTAAACCTTACCTTTGCCAATGGCTGC
ACCATCATTGGGGAGGAGCAGAGTGACCAGTTAACCGGTTTCATATTCAC
AGACACACCCTGCAAGGTCCTCGAGTCGTGGTTTTCGGCAAGCTTTCTAG
ACCAT

BO35352.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:06:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG42556-RA 774 CG42556-PA 1..771 17..787 3840 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG42556-RA 1332 CG42556-RA 366..1136 17..787 3840 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16890273..16891043 17..787 3840 99.9 Plus
Blast to na_te.dros performed on 2015-03-10 14:06:13 has no hits.

BO35352.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:09 Download gff for BO35352.complete
Subject Subject Range Query Range Percent Splice Strand
CG42556-RA 366..1136 17..789 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:09 Download gff for BO35352.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16890273..16891043 17..789 99   Plus

BO35352.pep Sequence

Translation from 16 to 805

> BO35352.pep
MQALRTVIQGLSTRHGQIISHIRRSSGSSSFPELAFFDDLDDMEPEDEEG
VMNHQYPILHSRHSDLFYMPNCVGPAYQGLISSLDQPYTTDCYMADEQTL
VKENDSIHDTILESLVAPTEMCVVACPKLLLTYMRRLFQHPYARFGSSMN
FSMIGLRFKDKDANKALTSFVHFASYNSREIMDNGYWADFINPLTGRAYY
RAAHCIRKQGLEAQLLGRGLNLTFANGCTIIGEEQSDQLTGFIFTDTPCK
VLESWFSASFLDH

BO35352.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:05:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG42556-PA 257 CG42556-PA 1..257 1..257 1367 100 Plus