Clone BO35374 Report

Search the DGRC for BO35374

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG42790-RB
Protein status:BO35374.pep: Imported from assembly
Sequenced Size:505

Clone Sequence Records

BO35374.complete Sequence

505 bp assembled on 2015-03-10

GenBank Submission: KX794075

> BO35374.complete
GAAGTTATCAGTCGACATGCAGCAAGGCAGGAGACCAGGAACCCAGGAAG
CAAACTCCCTGGATGTTGCATGTTCCTGCCGCCAGCAAGGAAATGAAAAC
GCCCCCATGTGTGAGCCAAAAAGCCAACGACCTGGGCAGGGCAGGCACAA
ACTACAAAGCGGGGGAAAAAAAAATAAACACACCGGAGTCGGAGGAGTCC
TGCCGCAGAGCAACTATAAAAAGGACACCCTGCAACCGTGTGTACCGGAG
TCTCTATCGGTGTCAGCCAGCAGCTTACAAAGTCAGACGCATTTGTGTGT
GTATCTGTGTGTGCCGAACGAAGGACGCTCCCAGCTTTTAAGTATAATTT
TCCAGATACACAGGCCGAGCACTGGAGTCCAGGTGGCAACTGCTAGACAA
AAACGATGTGCACGCCCCCACAAAAAACACACACACACACAGAGACAAGA
ACGTACAGGAGCAGAAGGACCAGAAGGACCAGCCAGCGCAAGCTTTCTAG
ACCAT

BO35374.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG42790-RB 474 CG42790-PB 1..471 17..487 2355 100 Plus
CG42790-RC 321 CG42790-PC 1..280 17..296 1400 100 Plus
CG42790-RC 321 CG42790-PC 281..321 356..396 205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:06:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG42790-RB 1416 CG42790-RB 28..498 17..487 2355 100 Plus
CG42790-RC 496 CG42790-RC 28..307 17..296 1400 100 Plus
CG42790-RC 496 CG42790-RC 308..439 356..487 660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:06:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26784365..26784835 17..487 2355 100 Plus
Blast to na_te.dros performed on 2015-03-10 14:06:34 has no hits.

BO35374.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:20 Download gff for BO35374.complete
Subject Subject Range Query Range Percent Splice Strand
CG42790-RB 28..498 17..489 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:20 Download gff for BO35374.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26784365..26784835 17..489 99   Plus

BO35374.pep Sequence

Translation from 16 to 505

> BO35374.pep
MQQGRRPGTQEANSLDVACSCRQQGNENAPMCEPKSQRPGQGRHKLQSGG
KKNKHTGVGGVLPQSNYKKDTLQPCVPESLSVSASSLQSQTHLCVYLCVP
NEGRSQLLSIIFQIHRPSTGVQVATARQKRCARPHKKHTHTQRQERTGAE
GPEGPASASFLDH

BO35374.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG42790-PB 157 CG42790-PB 1..157 1..157 840 100 Plus
CG42790-PC 106 CG42790-PC 1..93 1..93 496 100 Plus