Clone BO35396 Report

Search the DGRC for BO35396

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:353
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG14839-RA
Protein status:BO35396.pep: Imported from assembly
Sequenced Size:880

Clone Sequence Records

BO35396.complete Sequence

880 bp assembled on 2015-03-19

GenBank Submission: KX799703

> BO35396.complete
GAAGTTATCAGTCGACATGCGGATAGACACTCAGATCATGTGGCTAATAA
TTGTGTTATCCTCGCTCCCGGCATCCGCTACTGGCAATCATTATCGAACC
CGCCGAAAGCCAATGCAGACGGAGGACTCAGACCTGATGAGGAGTTTCGC
TGGTGGGCTCGGTGGCGGTGGTCCTGGTGATGGAACCGTGTGCGACATGT
CAGGGGAGGATAGCAACTCGCCGGCAAAGAAGACGCGAAACCATACTAAT
GCCAAACAGCGATCCTCCGGAATCGCCGTCCAGGCGGCCAACGAGGCTAA
AAAGGCAAACGATGATATGAAAAACGCCGTTAAGGAGGCCGCTGATAAAA
TCAAAGGCGAATACGCAGACAAGGCAAACGCTGCGGCCAAAGCTGCCGAA
GCAGTGCTGTTCGGAAAGAGTCAGGTGCTGGAGCAATTGGAAGCGGAGGT
CAGGGAGGCCGAAATGGTGGTGCAGGAGGAAAACCAGGAGCTGATCACCG
CCGAGTCGAATGCACAGCTTGCCGCCAAGACGCACCAATTGGTCCAGCAG
GAGCTCAAGACACTGACCATAAGCCTCAAGTTGGCCAAGGACATCAAGGA
TGCCTCAGATCAAGTGTACACAGTGTGGCAACAATCGCTCGCCGACAAGA
CGGCACTATTAGAAGCTGCCCAGCGGCGGGTTAATGTCCTAATGCGGCAA
CTTAGCGAAGCTCGATTAGATTACGATAAGACCAAGAAGGCGGCACTAAG
TGCCGCCAAAGCAGCCCAAGAGGCCAAACAGCGTATAGATCAATCGGAGT
GTGAAGGCGGTTCTCGTGGCAGAAGGGGGCGACGAGCGTGGCTGGAGTAC
AAGGAACACCATGCAAGCTTTCTAGACCAT

BO35396.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-19 16:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14839-RA 849 CG14839-PA 1..846 17..862 4155 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-19 16:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14839-RA 981 CG14839-RA 75..920 17..862 4155 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-19 16:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14262461..14263306 17..862 4155 99.4 Plus
Blast to na_te.dros performed on 2015-03-19 16:46:47 has no hits.

BO35396.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-19 16:46:49 Download gff for BO35396.complete
Subject Subject Range Query Range Percent Splice Strand
CG14839-RA 75..920 17..864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-19 16:46:49 Download gff for BO35396.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14262461..14263306 17..864 99   Plus

BO35396.pep Sequence

Translation from 16 to 880

> BO35396.pep
MRIDTQIMWLIIVLSSLPASATGNHYRTRRKPMQTEDSDLMRSFAGGLGG
GGPGDGTVCDMSGEDSNSPAKKTRNHTNAKQRSSGIAVQAANEAKKANDD
MKNAVKEAADKIKGEYADKANAAAKAAEAVLFGKSQVLEQLEAEVREAEM
VVQEENQELITAESNAQLAAKTHQLVQQELKTLTISLKLAKDIKDASDQV
YTVWQQSLADKTALLEAAQRRVNVLMRQLSEARLDYDKTKKAALSAAKAA
QEAKQRIDQSECEGGSRGRRGRRAWLEYKEHHASFLDH

BO35396.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-19 16:46:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG14839-PA 282 CG14839-PA 1..282 1..282 1408 100 Plus
CG14840-PA 300 CG14840-PA 4..265 5..260 371 37.8 Plus
CG11694-PA 261 CG11694-PA 39..239 52..256 366 44.4 Plus
CG14354-PA 298 CG14354-PA 60..238 78..256 365 45.3 Plus
CG34459-PC 305 CG34459-PC 60..294 32..256 337 40.1 Plus