BO35411.complete Sequence
1588 bp assembled on 2015-03-10
GenBank Submission: KX798523
> BO35411.complete
GAAGTTATCAGTCGACATGTGGCTCCGTCCCTCTCCCTCGCACACAAACG
CGCTGCAGTGTCTCCTGCTCTCCTTGTTCCTCCTTTTGGGGCTGCTGCCA
GCGAACGTGTCTGCCAGATTTTGCGAGGGCTGCACTCAGGGCTGTTGCAC
CCAGGGCTGCTGTCCGCCGTACCAGGGCGGGCCACGCCCCCTTCCGCCCT
CCTCGGACTCGCATGTTCTCAATCTGTTCTTCGCCACCCACTGGTTTTTC
TGGTGCGTGGTTGTGGCCATCATCTTGGCCATCCTGTGTGCCTACTCACT
ATGGAAGAAGCGGCGGACACTATGCGGCTGGGGATTCAATGAGCACCACA
CCCAATCCGAGGGCGATTCCGCCGGCTCCTGCTATGCACCACCACAATAT
AGTCGCTGCAACTCGTTTCACCATCCGCCGCCGCCATATACGGAGGTGAC
CTCCAAGCCGGATCTGTATCCACTTGTCTTCACCTGCAACAGCGATTCGG
GCAATGGCAAGGGCAACGGCAGCTCCAGCTACCTTATGTCCCAGAGTGAT
CAGCACTTCCGGTATATGGCGAATAGCAGCAGCAGTCTCAGCGACATCTT
TGTGAATAACAGCTGTGTGGCAGGAATGCTACCCGAAAGCGGAGGAGCTG
GTGGTGCCTTCCATGGCGCGGAAAGTGGATCGGCAACACAGGCTGCCTCC
CTGAATAGCCTGGCAATGGGCGGCTTGGGAGGATCGGTAACGGGTGCCGC
AGGCACATCGGGAGGATCTGGCACACCGGTGATATACAGCAATGGCTGCA
TCCAACCGAACCCGCTGCATAGTCTGGAGAACTGCTGCCAGCCATCGGCT
CAGGTGTCCGGCGTGAGTAGTCTGGCCAACATTGGAACACCGGGCTCGCC
GCCTCAGGCCACCAGTCCGACGGGCGAGGTGCGTGAGATTCTCGACCAGA
TCCGCCAGCTGCAGGCGGGCGTTAGCTACGAGCAGCTACTGCTGAACGGA
ACTGGCGCCAAGCCCCGGCTGCAGCATACGCTATCGACGCCCTCGAACTC
CCAGCAGGTGTTGCAGCCCATCCTAACCACATCCGCATCCATTTCGGGCG
GCACCAGTGGGCGGAGTAAAAAGTTCTTCACCTCCGGCAGCAAAACGCAA
CCCAATAAGGCTCTGTACATACCCATGGCCGCCATCGGAGGTTCCGGATC
GGGCGCACAGCGTTGTGTGCTCAAGAGCCCGGTGAGCAGTGTCGTCAGCG
GTGCCAGCTTCTTTGTGAATCGTGGACGAGTTGCACGCAAGGGTTGGATC
ACCCGATCGGCACCCACAACGCCGGGCAGTGCCCTGCCGCCCAATCGCCT
CGGGGATGATAGTCCGCTGCTGCTTAACGAGCACGATGAGGATGCCATTG
ACGATGATGAAGATGAGGAACAGGAGGTGGTCGATCGCCAGCGGAATCAT
CAGGAGACCCAGCGGGGTCATGAGGATACCGACAGCGAAACAGAGGCGGA
GGCCAGGAATCATCGTCGCCAGCATCGCCATCATCGTGGTCATCGTGGCC
ATCGCCGCGGACAACTTGAAGCAAGCTTTCTAGACCAT
BO35411.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15760-RA | 1557 | CG15760-PA | 1..1554 | 17..1570 | 7725 | 99.8 | Plus |
| CG15760-RC | 2073 | CG15760-PC | 1028..2070 | 528..1570 | 5155 | 99.6 | Plus |
| CG15760-RB | 2073 | CG15760-PB | 1028..2070 | 528..1570 | 5155 | 99.6 | Plus |
| CG15760-RC | 2073 | CG15760-PC | 1..522 | 17..538 | 2595 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15760-RA | 2312 | CG15760-RA | 475..2028 | 17..1570 | 7725 | 99.8 | Plus |
| CG15760-RC | 2831 | CG15760-RC | 1505..2547 | 528..1570 | 5155 | 99.6 | Plus |
| CG15760-RB | 4588 | CG15760-RB | 1505..2547 | 528..1570 | 5155 | 99.6 | Plus |
| CG15760-RC | 2831 | CG15760-RC | 478..999 | 17..538 | 2595 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13673241..13674191 | 620..1570 | 4740 | 99.9 | Plus |
| X | 23542271 | X | 13672235..13672430 | 252..447 | 980 | 100 | Plus |
| X | 23542271 | X | 13671301..13671449 | 107..255 | 745 | 100 | Plus |
| X | 23542271 | X | 13670560..13670651 | 17..108 | 460 | 100 | Plus |
| X | 23542271 | X | 13672485..13672579 | 444..538 | 460 | 98.9 | Plus |
| X | 23542271 | X | 13673085..13673181 | 528..624 | 440 | 96.9 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:07:06 has no hits.
BO35411.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:40 Download gff for
BO35411.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15760-RA | 475..2028 | 17..1572 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:40 Download gff for
BO35411.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13670560..13670649 | 17..106 | 100 | -> | Plus |
| X | 13671301..13671446 | 107..252 | 100 | -> | Plus |
| X | 13672236..13672428 | 253..445 | 100 | -> | Plus |
| X | 13672487..13672579 | 446..538 | 98 | -> | Plus |
| X | 13673096..13673180 | 539..623 | 98 | -> | Plus |
| X | 13673245..13674191 | 624..1572 | 99 | | Plus |
BO35411.pep Sequence
Translation from 16 to 1588
> BO35411.pep
MWLRPSPSHTNALQCLLLSLFLLLGLLPANVSARFCEGCTQGCCTQGCCP
PYQGGPRPLPPSSDSHVLNLFFATHWFFWCVVVAIILAILCAYSLWKKRR
TLCGWGFNEHHTQSEGDSAGSCYAPPQYSRCNSFHHPPPPYTEVTSKPDL
YPLVFTCNSDSGNGKGNGSSSYLMSQSDQHFRYMANSSSSLSDIFVNNSC
VAGMLPESGGAGGAFHGAESGSATQAASLNSLAMGGLGGSVTGAAGTSGG
SGTPVIYSNGCIQPNPLHSLENCCQPSAQVSGVSSLANIGTPGSPPQATS
PTGEVREILDQIRQLQAGVSYEQLLLNGTGAKPRLQHTLSTPSNSQQVLQ
PILTTSASISGGTSGRSKKFFTSGSKTQPNKALYIPMAAIGGSGSGAQRC
VLKSPVSSVVSGASFFVNRGRVARKGWITRSAPTTPGSALPPNRLGDDSP
LLLNEHDEDAIDDDEDEEQEVVDRQRNHQETQRGHEDTDSETEAEARNHR
RQHRHHRGHRGHRRGQLEASFLDH
BO35411.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15760-PA | 518 | CG15760-PA | 1..518 | 1..518 | 2780 | 100 | Plus |
| CG15760-PC | 690 | CG15760-PC | 323..690 | 150..518 | 1802 | 95.4 | Plus |
| CG15760-PB | 690 | CG15760-PB | 323..690 | 150..518 | 1802 | 95.4 | Plus |
| CG15760-PC | 690 | CG15760-PC | 1..416 | 1..397 | 1013 | 53.2 | Plus |
| CG15760-PB | 690 | CG15760-PB | 1..416 | 1..397 | 1013 | 53.2 | Plus |
