Clone BO35456 Report

Search the DGRC for BO35456

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:354
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG8204-RA
Protein status:BO35456.pep: Imported from assembly
Sequenced Size:463

Clone Sequence Records

BO35456.complete Sequence

463 bp assembled on 2015-03-10

GenBank Submission: KX799938

> BO35456.complete
GAAGTTATCAGTCGACATGGAAAAATGCATTATTTGCGTAGATAACTTGA
GAAAATACAAGTGCAGCAAATGCTCGGCACCCTACTGCTCTGTGGCTTGT
TATAAGACACACAGGGATTCGCCCCAATGTGCGACAAGGGAGTCCGACTT
GAAAAAGACTGAAGTTGGCTACCAGGAGGAACCTACGCTTCATGTGCCCT
TCCCCACCGACGACACAGTTGCCGCGGAGAAGCTCCAGCAACTAGAAAAC
TGCCAGGAACTGCGTAATTTGCTCCACAATCCACACCTGCGTTCGCTGCT
CCAGCAGATTGATGTGGCCATCAATGCCCAGTCGGCCATGATGGCCGCCA
TGCAGGAGCCACTCTTCGTGGAGTTCGCTAATGCCTGCCTTCAAGTCGTC
GAACCGATGACGGATGCGGAGCGAACTGAATTTGAGTTGTACTCCGCAAG
CTTTCTAGACCAT

BO35456.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8204-RB 432 CG8204-PB 1..429 17..445 2115 99.5 Plus
CG8204-RA 432 CG8204-PA 1..429 17..445 2115 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8204-RB 506 CG8204-RB 30..458 17..445 2115 99.5 Plus
CG8204-RA 735 CG8204-RA 259..687 17..445 2115 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15573192..15573393 445..244 980 99 Minus
2R 25286936 2R 15573450..15573610 245..85 805 100 Minus
2R 25286936 2R 15573666..15573733 84..17 340 100 Minus
Blast to na_te.dros performed on 2015-03-10 14:07:09 has no hits.

BO35456.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:42 Download gff for BO35456.complete
Subject Subject Range Query Range Percent Splice Strand
CG8204-RB 30..458 17..447 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:42 Download gff for BO35456.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15573189..15573391 246..447 98 <- Minus
2R 15573450..15573610 85..245 100 <- Minus
2R 15573666..15573733 17..84 100   Minus

BO35456.pep Sequence

Translation from 16 to 463

> BO35456.pep
MEKCIICVDNLRKYKCSKCSAPYCSVACYKTHRDSPQCATRESDLKKTEV
GYQEEPTLHVPFPTDDTVAAEKLQQLENCQELRNLLHNPHLRSLLQQIDV
AINAQSAMMAAMQEPLFVEFANACLQVVEPMTDAERTEFELYSASFLDH

BO35456.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG8204-PB 143 CG8204-PB 1..143 1..143 759 100 Plus
CG8204-PA 143 CG8204-PA 1..143 1..143 759 100 Plus