Clone BO35468 Report

Search the DGRC for BO35468

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:354
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG31380-RA
Protein status:BO35468.pep: Imported from assembly
Sequenced Size:1249

Clone Sequence Records

BO35468.complete Sequence

1249 bp assembled on 2015-03-10

GenBank Submission: KX794767

> BO35468.complete
GAAGTTATCAGTCGACATGGCAGCTTGGCTCACAGCTGAATACCTGGAAG
CGGCACTGCGTCGGTATTACCAGAACAACGAACTTCGAGTGGAATCGATG
GTTATAAATCCCGCTTTAGGGAAAGGAGAAAACTATGGTGCTATCCTAAC
ACGCATACACCTTGTGTACAGCAGCATAGTCGAGGAACATCTGATTGCCA
AGACTGTTCTAGAGTATGAAGACGCGGAGACGAAAATGAAGAAAGCCCCA
TATGATATTTACAATCGGGAACTGGAGATTTACGAGCAAGTGTTACCAAA
ATTGCAGGAACTAGCCGGCGAGCAACTATGTCCTAAAATACTACACATCG
ATCGTCAAAGAGGAGCACTCATAATGGAAGATCTGAGCTACAAGGGATTT
GTGATGGCCCCGAGACTTCAGAGATTGGATGAGCAGCATGTGAGTTTGGT
TCTTAGGAAGTTGGCCAAAATGCAGGCAGCATCAGCGGTTTTGGAGAACA
ATCTTTTGGAAAATAACTTCTCTCTCACTGAATACGATAAAGGCTTCTTC
AATAGGTATACAGAAAGCTTTAGTGCCTACTTTCTGGGCTGCCTCAAGTC
CTGTGCCAATTACCTTAAAACTCAGGCGGGTTATGAACACCACGCAAAAC
TATTAGACGAACTGGCTCCCTATTATATGGGACTAGGACTCCGCTGTTTT
AAGCAAGAGCAAACGCACATTAATGTCCTTACCCACGGCGACTTGTGGAC
AAACAACATGATGTTCAAATACGAGGCGGGCGTGCCGAGCGATGTCCTTC
TGATTGACTTTCAGTACGCCTTCTGGGGTTCGCCCACCCTGGACATCCAT
CATCTGCTCAACACGTCGGCTGTGGAGCAAGTGCGGAGTGAGCTGCAAAT
GAAGATGAGAGGTGTCTATCACGATGTCTTCGTGGGGGAGCTGCAGAGAC
TTGGCTTCAAAGGTCAAAGGTTGCCCAGTCGAAAGCAGTTTCACCTGGAG
TCAGAGCAAAAACGATTTTACGCCGTTCATTGTGGCCTGCTGCTGCTACC
TGTGCTGCTAAACACCGATGAAACTGATGCGGATTTCGCCGCCCTTCTTT
CGGATCAGCCGCGTGGAATGGATATGAAAAGGCGGCTGTATCTCAACCCT
GGCATCCAGGACTCTATTAAGCAAATGGTGAAGCATTTCGAGCTGGAAGG
GCTCCTGGATCCGTGGCAATACGAAGGCCTCGCAAGCTTTCTAGACCAT

BO35468.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:06:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31380-RA 1218 CG31380-PA 1..1215 17..1231 6060 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG31380-RA 1335 CG31380-RA 3..1225 16..1238 6070 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:06:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25788447..25789453 1022..16 5035 100 Minus
3R 32079331 3R 25788107..25788327 1238..1018 1045 98.2 Minus
Blast to na_te.dros performed on 2015-03-10 14:06:56 has no hits.

BO35468.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:33 Download gff for BO35468.complete
Subject Subject Range Query Range Percent Splice Strand
CG31380-RA 4..1218 17..1233 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:33 Download gff for BO35468.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25788447..25789452 17..1022 100   Minus
3R 25788111..25788322 1023..1233 98 <- Minus

BO35468.pep Sequence

Translation from 16 to 1249

> BO35468.pep
MAAWLTAEYLEAALRRYYQNNELRVESMVINPALGKGENYGAILTRIHLV
YSSIVEEHLIAKTVLEYEDAETKMKKAPYDIYNRELEIYEQVLPKLQELA
GEQLCPKILHIDRQRGALIMEDLSYKGFVMAPRLQRLDEQHVSLVLRKLA
KMQAASAVLENNLLENNFSLTEYDKGFFNRYTESFSAYFLGCLKSCANYL
KTQAGYEHHAKLLDELAPYYMGLGLRCFKQEQTHINVLTHGDLWTNNMMF
KYEAGVPSDVLLIDFQYAFWGSPTLDIHHLLNTSAVEQVRSELQMKMRGV
YHDVFVGELQRLGFKGQRLPSRKQFHLESEQKRFYAVHCGLLLLPVLLNT
DETDADFAALLSDQPRGMDMKRRLYLNPGIQDSIKQMVKHFELEGLLDPW
QYEGLASFLDH

BO35468.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31380-PA 405 CG31380-PA 1..405 1..405 2115 100 Plus
CG10514-PA 413 CG10514-PA 7..408 4..398 949 46.6 Plus
CG11892-PA 439 CG11892-PA 36..436 4..398 825 43.4 Plus
CG11892-PB 439 CG11892-PB 36..436 4..398 825 43.4 Plus
CG10513-PB 422 CG10513-PB 18..419 4..398 647 37 Plus