Clone BO35484 Report

Search the DGRC for BO35484

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:354
Well:84
Vector:pDNR-Dual
Associated Gene/Transcriptsmp-30-RC
Protein status:BO35484.pep: Imported from assembly
Sequenced Size:952

Clone Sequence Records

BO35484.complete Sequence

952 bp assembled on 2015-03-10

GenBank Submission: KX794128

> BO35484.complete
GAAGTTATCAGTCGACATGACACAAATGTCATACAAGGTTGAAGCTGTTC
CCGATTCCTACGCCGCCCTGGGCGAGGGACCCCACTGGGATGTTGATCGC
CAGAGTCTGTACTACGTGGACCTCGAATCCGCCGGCATTAATCGTTATGA
TTTCAAGCAGAACAAAGTGTACAGGGCTAAAATCGAGGGCGAGATATTTG
CATCGTTCATTCTGCCGGTTGAGAACAAACCGCAGGAGTTTGCCGTAGGA
TGCGGTCTTCGTACGGTCATCGTCCAGTGGGATGGAGTCTCCGCAGTGGC
CAAGGTCACTCGCACCCTGTTCGAGGTGCAGCCGGACCTGAAGGAAAACC
GCCTTAATGATGCCAAAACCGATCCCAATGGCCGTTTTTACGGTGGCACC
ATGGCCGACAGTGGCGACATATTCACCCAATGGAAGGGTGAGCTCTACAG
CTGGCAGGCCGGTGGACAGCCCAACGCTATCCGTAGCAAGGTGGGCATAT
CCAATGGCCTGGCCTGGGATGTCAAGGCCAAGAAGTTCTACTTCATCGAC
ACCAACAACCACGAGGTATTGGCCTATGACTACAATCAGAGCACCGGCGC
CGTAAGCAACCCAAAGGTCATCTTCGATCTGAGGAAGATTCGGCCCGAAG
GACCATTGTTCCCTGATGGCATGACCGTAGACACCGATGGCAATATCTAC
GTGGCCACCTTCAATGGTGGCACCGTCTTCAAGGTCAATCCAAGCACCGG
TAAAATTCTGCTGGAGATCAAAATTCCAACCACCCAAATCACCTCGGTGG
CTTTTGGAGGTCCCAATTTGGATATTTTGTATGTGACAACCGCCAACAAG
TTCGACCAGCCAAAACCAGCTGGTACCACCTTCCAGGTCACTGGGCTCAA
TGCCAAGGGTTACGCCGGCGTTAATTTGAAGATCGCAAGCTTTCTAGACC
AT

BO35484.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RC 921 CG7390-PC 1..918 17..934 4590 100 Plus
smp-30-RD 912 CG7390-PD 1..909 26..934 4545 100 Plus
smp-30-RB 912 CG7390-PB 1..909 26..934 4545 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-RC 1102 CG7390-RC 118..1035 17..934 4590 100 Plus
smp-30-RD 1297 CG7390-RD 321..1230 25..934 4550 100 Plus
smp-30-RB 1219 CG7390-RB 53..961 26..934 4545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14746407..14747125 744..26 3595 100 Minus
3R 32079331 3R 14746159..14746350 934..743 960 100 Minus
X 23542271 X 12015999..12016718 22..741 480 71.1 Plus
Blast to na_te.dros performed on 2015-03-10 14:07:03 has no hits.

BO35484.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:38 Download gff for BO35484.complete
Subject Subject Range Query Range Percent Splice Strand
smp-30-RC 118..1035 17..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:38 Download gff for BO35484.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14746157..14746348 745..936 98 <- Minus
3R 14746407..14747128 23..744 99   Minus

BO35484.pep Sequence

Translation from 16 to 952

> BO35484.pep
MTQMSYKVEAVPDSYAALGEGPHWDVDRQSLYYVDLESAGINRYDFKQNK
VYRAKIEGEIFASFILPVENKPQEFAVGCGLRTVIVQWDGVSAVAKVTRT
LFEVQPDLKENRLNDAKTDPNGRFYGGTMADSGDIFTQWKGELYSWQAGG
QPNAIRSKVGISNGLAWDVKAKKFYFIDTNNHEVLAYDYNQSTGAVSNPK
VIFDLRKIRPEGPLFPDGMTVDTDGNIYVATFNGGTVFKVNPSTGKILLE
IKIPTTQITSVAFGGPNLDILYVTTANKFDQPKPAGTTFQVTGLNAKGYA
GVNLKIASFLDH

BO35484.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
smp-30-PC 306 CG7390-PC 1..306 1..306 1614 100 Plus
smp-30-PD 303 CG7390-PD 1..303 4..306 1599 100 Plus
smp-30-PB 303 CG7390-PB 1..303 4..306 1599 100 Plus
smp-30-PA 303 CG7390-PA 1..303 4..306 1599 100 Plus
regucalcin-PB 303 CG1803-PB 1..303 4..306 1173 71.9 Plus