Clone Sequence Records
BS01015.3prime Sequence
542 bp (541 high quality bases) assembled on 2005-11-30
> BS01015.3prime
ATGGTCTAGAAAGCTTCGCTAAGCGGAGGCCGCCACCTCACCGGACTTCT
CCTCCTTTGTGTCGGCGATGGCCACCTCCTCGAAGTTCTCGACCAGATCG
GGCACATCATCGTCACCGGCATCGGCGGCTGAAGAGCCGGCTGCTCCGCC
GGCGCCGCTCTTGCTGGCAATCTCCGTGGCCAGCTTCTTCAGCTGGTTGA
TGTCCTGGGGACCCAGTTGCGTCAGAATGCCGGGCACCATCTCGGTGATC
GTCTTGTTCTCGCCATGACCCGTGATGGCAAACGTGTTCGTCGGCAGCGA
GGCCTGGGCCTTCGGATTGTTGAAGTGGATGACGGTGCCATCGTTCTTGA
TGATGTTCACCTCCTCGATGCCGGGAATTGTGTTTACCGACAGCTTCTTG
AGCGACGACTGCAGCTTCTTGTCGTCGGTGGCGGGCGTGGAGTGGACGAT
CTTCTTCTTGCGGCGAGGGGTGCCCTTGCCGCCAATGCGCACCTGCGCCT
GCAACTTCTTCAGCTTTTCCGCGTTCATGTCGACTGATAACT
BS01015.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3644-PA | 510 | bic-RA | 1..510 | 528..19 | 2550 | 100 | Minus |
CG3644-PB | 510 | bic-RB | 1..510 | 528..19 | 2550 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bic-RB | 992 | CG3644-RB | 155..664 | 528..19 | 2550 | 100 | Minus |
bic-RA | 1474 | CG3644-RA | 83..592 | 528..19 | 2550 | 100 | Minus |
CG11835-RD | 3183 | CG11835-RD | 568..840 | 530..258 | 585 | 81.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:46:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12870403..12870912 | 528..19 | 2550 | 100 | Minus |
2L | 23513712 | 2L | 562911..563183 | 258..530 | 585 | 81 | Plus |
Blast to na_te.dros performed on 2015-02-06 15:46:17 has no hits.
BS01015.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:16 Download gff for
BS01015.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-PA | 1..510 | 19..528 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:04:31 Download gff for
BS01015.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3644-PB | 1..510 | 19..528 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:16:30 Download gff for
BS01015.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RA | 73..592 | 19..539 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:01:13 Download gff for
BS01015.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RA | 73..592 | 19..539 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:01:13 Download gff for
BS01015.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12870403..12870912 | 19..528 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:16:30 Download gff for
BS01015.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8757908..8758417 | 19..528 | 100 | | Minus |
BS01015.5prime Sequence
542 bp (541 high quality bases) assembled on 2005-11-30
> BS01015.5prime
GAAGTTATCAGTCGACATGAACGCGGAAAAGCTGAAGAAGTTGCAGGCGC
AGGTGCGCATTGGCGGCAAGGGCACCCCTCGCCGCAAGAAGAAGATCGTC
CACTCCACGCCCGCCACCGACGACAAGAAGCTGCAGTCGTCGCTCAAGAA
GCTGTCGGTAAACACAATTCCCGGCATCGAGGAGGTGAACATCATCAAGA
ACGATGGCACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTG
CCGACGAACACGTTTGCCATCACGGGTCATGGCGAGAACAAGACGATCAC
CGAGATGGTGCCCGGCATTCTGACGCAACTGGGTCCCCAGGACATCAACC
AGCTGAAGAAGCTGGCCACGGAGATTGCCAGCAAGAGCGGCGCCGGCGGA
GCAGCCGGCTCTTCAGCCGCCGATGCCGGTGACGATGATGTGCCCGATCT
GGTCGAGAACTTCGAGGAGGTGGCCATCGCCGACACAAAGGAGGAGAAGT
CCGGTGAGGTGGCGGCCTCCGCTTAGCGAAGCTTTCTAGACC
BS01015.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3644-PA | 510 | bic-RA | 1..510 | 17..526 | 2550 | 100 | Plus |
CG3644-PB | 510 | bic-RB | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:10:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bic-RB | 992 | CG3644-RB | 155..664 | 17..526 | 2550 | 100 | Plus |
bic-RA | 1474 | CG3644-RA | 83..592 | 17..526 | 2550 | 100 | Plus |
CG11835-RD | 3183 | CG11835-RD | 568..840 | 15..287 | 585 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12870403..12870912 | 17..526 | 2550 | 100 | Plus |
2L | 23513712 | 2L | 562911..563183 | 287..15 | 585 | 81 | Minus |
Blast to na_te.dros performed on 2015-02-12 07:10:00 has no hits.
BS01015.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:17 Download gff for
BS01015.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-PA | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:04:32 Download gff for
BS01015.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3644-PB | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 17:01:40 Download gff for
BS01015.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RA | 73..592 | 6..526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:03:28 Download gff for
BS01015.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RA | 73..592 | 6..526 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:03:28 Download gff for
BS01015.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12870403..12870912 | 17..526 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 17:01:40 Download gff for
BS01015.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8757908..8758417 | 17..526 | 100 | | Plus |
BS01015.complete Sequence
544 bp (544 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634495
> BS01015.complete
GAAGTTATCAGTCGACATGAACGCGGAAAAGCTGAAGAAGTTGCAGGCGC
AGGTGCGCATTGGCGGCAAGGGCACCCCTCGCCGCAAGAAGAAGATCGTC
CACTCCACGCCCGCCACCGACGACAAGAAGCTGCAGTCGTCGCTCAAGAA
GCTGTCGGTAAACACAATTCCCGGCATCGAGGAGGTGAACATCATCAAGA
ACGATGGCACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTG
CCGACGAACACGTTTGCCATCACGGGTCATGGCGAGAACAAGACGATCAC
CGAGATGGTGCCCGGCATTCTGACGCAACTGGGTCCCCAGGACATCAACC
AGCTGAAGAAGCTGGCCACGGAGATTGCCAGCAAGAGCGGCGCCGGCGGA
GCAGCCGGCTCTTCAGCCGCCGATGCCGGTGACGATGATGTGCCCGATCT
GGTCGAGAACTTCGAGGAGGTGGCCATCGCCGACACAAAGGAGGAGAAGT
CCGGTGAGGTGGCGGCCTCCGCTTAGCGAAGCTTTCTAGACCAT
BS01015.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:09:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bic-RB | 510 | CG3644-PB | 1..510 | 17..526 | 2550 | 100 | Plus |
bic-RA | 510 | CG3644-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
CG11835-RD | 2388 | CG11835-PD | 1..271 | 17..287 | 575 | 80.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:09:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bic-RB | 992 | CG3644-RB | 155..664 | 17..526 | 2550 | 100 | Plus |
bic-RA | 1474 | CG3644-RA | 83..592 | 17..526 | 2550 | 100 | Plus |
CG11835-RD | 3183 | CG11835-RD | 568..840 | 15..287 | 585 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:09:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12870403..12870912 | 17..526 | 2550 | 100 | Plus |
2L | 23513712 | 2L | 562911..563183 | 287..15 | 585 | 81 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:09:26 has no hits.
BS01015.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:38 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RB | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:59 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RB | 149..658 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:32 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RA | 83..593 | 17..528 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:38 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RB | 149..658 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:09 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bic-RA | 83..593 | 17..528 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:09 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12870403..12870913 | 17..528 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:32 Download gff for
BS01015.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8757908..8758418 | 17..528 | 99 | | Plus |
BS01015.pep Sequence
Translation from 16 to 525
> BS01015.pep
MNAEKLKKLQAQVRIGGKGTPRRKKKIVHSTPATDDKKLQSSLKKLSVNT
IPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGENKTITEMVPG
ILTQLGPQDINQLKKLATEIASKSGAGGAAGSSAADAGDDDVPDLVENFE
EVAIADTKEEKSGEVAASA*
BS01015.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bic-PB | 169 | CG3644-PB | 1..169 | 1..169 | 844 | 100 | Plus |
bic-PA | 169 | CG3644-PA | 1..169 | 1..169 | 844 | 100 | Plus |
CG11835-PD | 795 | CG11835-PD | 1..169 | 1..169 | 524 | 63.3 | Plus |
CG11835-PC | 795 | CG11835-PC | 1..169 | 1..169 | 524 | 63.3 | Plus |
CG11835-PB | 795 | CG11835-PB | 1..169 | 1..169 | 524 | 63.3 | Plus |