Clone BS01015 Report

Search the DGRC for BS01015

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:10
Well:15
Vector:pDNR-Dual
Associated Gene/Transcriptbic-RA
Protein status:BS01015.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01015.3prime Sequence

542 bp (541 high quality bases) assembled on 2005-11-30

> BS01015.3prime
ATGGTCTAGAAAGCTTCGCTAAGCGGAGGCCGCCACCTCACCGGACTTCT
CCTCCTTTGTGTCGGCGATGGCCACCTCCTCGAAGTTCTCGACCAGATCG
GGCACATCATCGTCACCGGCATCGGCGGCTGAAGAGCCGGCTGCTCCGCC
GGCGCCGCTCTTGCTGGCAATCTCCGTGGCCAGCTTCTTCAGCTGGTTGA
TGTCCTGGGGACCCAGTTGCGTCAGAATGCCGGGCACCATCTCGGTGATC
GTCTTGTTCTCGCCATGACCCGTGATGGCAAACGTGTTCGTCGGCAGCGA
GGCCTGGGCCTTCGGATTGTTGAAGTGGATGACGGTGCCATCGTTCTTGA
TGATGTTCACCTCCTCGATGCCGGGAATTGTGTTTACCGACAGCTTCTTG
AGCGACGACTGCAGCTTCTTGTCGTCGGTGGCGGGCGTGGAGTGGACGAT
CTTCTTCTTGCGGCGAGGGGTGCCCTTGCCGCCAATGCGCACCTGCGCCT
GCAACTTCTTCAGCTTTTCCGCGTTCATGTCGACTGATAACT

BS01015.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG3644-PA 510 bic-RA 1..510 528..19 2550 100 Minus
CG3644-PB 510 bic-RB 1..510 528..19 2550 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:46:20
Subject Length Description Subject Range Query Range Score Percent Strand
bic-RB 992 CG3644-RB 155..664 528..19 2550 100 Minus
bic-RA 1474 CG3644-RA 83..592 528..19 2550 100 Minus
CG11835-RD 3183 CG11835-RD 568..840 530..258 585 81.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12870403..12870912 528..19 2550 100 Minus
2L 23513712 2L 562911..563183 258..530 585 81 Plus
Blast to na_te.dros performed on 2015-02-06 15:46:17 has no hits.

BS01015.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:16 Download gff for BS01015.3prime
Subject Subject Range Query Range Percent Splice Strand
bic-PA 1..510 19..528 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:04:31 Download gff for BS01015.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3644-PB 1..510 19..528 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:16:30 Download gff for BS01015.3prime
Subject Subject Range Query Range Percent Splice Strand
bic-RA 73..592 19..539 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:01:13 Download gff for BS01015.3prime
Subject Subject Range Query Range Percent Splice Strand
bic-RA 73..592 19..539 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:01:13 Download gff for BS01015.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12870403..12870912 19..528 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:16:30 Download gff for BS01015.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8757908..8758417 19..528 100   Minus

BS01015.5prime Sequence

542 bp (541 high quality bases) assembled on 2005-11-30

> BS01015.5prime
GAAGTTATCAGTCGACATGAACGCGGAAAAGCTGAAGAAGTTGCAGGCGC
AGGTGCGCATTGGCGGCAAGGGCACCCCTCGCCGCAAGAAGAAGATCGTC
CACTCCACGCCCGCCACCGACGACAAGAAGCTGCAGTCGTCGCTCAAGAA
GCTGTCGGTAAACACAATTCCCGGCATCGAGGAGGTGAACATCATCAAGA
ACGATGGCACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTG
CCGACGAACACGTTTGCCATCACGGGTCATGGCGAGAACAAGACGATCAC
CGAGATGGTGCCCGGCATTCTGACGCAACTGGGTCCCCAGGACATCAACC
AGCTGAAGAAGCTGGCCACGGAGATTGCCAGCAAGAGCGGCGCCGGCGGA
GCAGCCGGCTCTTCAGCCGCCGATGCCGGTGACGATGATGTGCCCGATCT
GGTCGAGAACTTCGAGGAGGTGGCCATCGCCGACACAAAGGAGGAGAAGT
CCGGTGAGGTGGCGGCCTCCGCTTAGCGAAGCTTTCTAGACC

BS01015.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG3644-PA 510 bic-RA 1..510 17..526 2550 100 Plus
CG3644-PB 510 bic-RB 1..510 17..526 2550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:10:02
Subject Length Description Subject Range Query Range Score Percent Strand
bic-RB 992 CG3644-RB 155..664 17..526 2550 100 Plus
bic-RA 1474 CG3644-RA 83..592 17..526 2550 100 Plus
CG11835-RD 3183 CG11835-RD 568..840 15..287 585 81.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12870403..12870912 17..526 2550 100 Plus
2L 23513712 2L 562911..563183 287..15 585 81 Minus
Blast to na_te.dros performed on 2015-02-12 07:10:00 has no hits.

BS01015.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:17 Download gff for BS01015.5prime
Subject Subject Range Query Range Percent Splice Strand
bic-PA 1..510 17..526 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:04:32 Download gff for BS01015.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3644-PB 1..510 17..526 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 17:01:40 Download gff for BS01015.5prime
Subject Subject Range Query Range Percent Splice Strand
bic-RA 73..592 6..526 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:03:28 Download gff for BS01015.5prime
Subject Subject Range Query Range Percent Splice Strand
bic-RA 73..592 6..526 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:03:28 Download gff for BS01015.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12870403..12870912 17..526 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 17:01:40 Download gff for BS01015.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8757908..8758417 17..526 100   Plus

BS01015.complete Sequence

544 bp (544 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634495

> BS01015.complete
GAAGTTATCAGTCGACATGAACGCGGAAAAGCTGAAGAAGTTGCAGGCGC
AGGTGCGCATTGGCGGCAAGGGCACCCCTCGCCGCAAGAAGAAGATCGTC
CACTCCACGCCCGCCACCGACGACAAGAAGCTGCAGTCGTCGCTCAAGAA
GCTGTCGGTAAACACAATTCCCGGCATCGAGGAGGTGAACATCATCAAGA
ACGATGGCACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTG
CCGACGAACACGTTTGCCATCACGGGTCATGGCGAGAACAAGACGATCAC
CGAGATGGTGCCCGGCATTCTGACGCAACTGGGTCCCCAGGACATCAACC
AGCTGAAGAAGCTGGCCACGGAGATTGCCAGCAAGAGCGGCGCCGGCGGA
GCAGCCGGCTCTTCAGCCGCCGATGCCGGTGACGATGATGTGCCCGATCT
GGTCGAGAACTTCGAGGAGGTGGCCATCGCCGACACAAAGGAGGAGAAGT
CCGGTGAGGTGGCGGCCTCCGCTTAGCGAAGCTTTCTAGACCAT

BS01015.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
bic-RB 510 CG3644-PB 1..510 17..526 2550 100 Plus
bic-RA 510 CG3644-PA 1..510 17..526 2550 100 Plus
CG11835-RD 2388 CG11835-PD 1..271 17..287 575 80.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
bic-RB 992 CG3644-RB 155..664 17..526 2550 100 Plus
bic-RA 1474 CG3644-RA 83..592 17..526 2550 100 Plus
CG11835-RD 3183 CG11835-RD 568..840 15..287 585 81 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12870403..12870912 17..526 2550 100 Plus
2L 23513712 2L 562911..563183 287..15 585 81 Minus
Blast to na_te.dros performed on 2014-11-27 15:09:26 has no hits.

BS01015.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:38 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
bic-RB 1..510 17..526 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:59 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
bic-RB 149..658 17..526 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:32 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
bic-RA 83..593 17..528 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:38 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
bic-RB 149..658 17..526 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:01:09 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
bic-RA 83..593 17..528 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:01:09 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12870403..12870913 17..528 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:32 Download gff for BS01015.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8757908..8758418 17..528 99   Plus

BS01015.pep Sequence

Translation from 16 to 525

> BS01015.pep
MNAEKLKKLQAQVRIGGKGTPRRKKKIVHSTPATDDKKLQSSLKKLSVNT
IPGIEEVNIIKNDGTVIHFNNPKAQASLPTNTFAITGHGENKTITEMVPG
ILTQLGPQDINQLKKLATEIASKSGAGGAAGSSAADAGDDDVPDLVENFE
EVAIADTKEEKSGEVAASA*

BS01015.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
bic-PB 169 CG3644-PB 1..169 1..169 844 100 Plus
bic-PA 169 CG3644-PA 1..169 1..169 844 100 Plus
CG11835-PD 795 CG11835-PD 1..169 1..169 524 63.3 Plus
CG11835-PC 795 CG11835-PC 1..169 1..169 524 63.3 Plus
CG11835-PB 795 CG11835-PB 1..169 1..169 524 63.3 Plus