Clone BS01036 Report

Search the DGRC for BS01036

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:10
Well:36
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS01036.pep:
Sequenced Size:16

Clone Sequence Records

BS01036.3prime Sequence

794 bp (793 high quality bases) assembled on 2005-11-30

> BS01036.3prime
ATGGTCTAGAAAGCTTCGCTAGTTGGTCACAAACTCAAACTCCTCCTCCT
CACGTTCCCGCTTGACGGCCACTCCAACGCCAGATGATCCTCCTCCTCCT
CCTCCTCCGCTGGCACTTCCTGCTCCCGAACCGGATGCGCCAGCGATGCT
GCCCACGGCCGCCGCATCGCTGTCCACCTCCATCTTGAGATCTCCGCCGG
CGCCGGTGCTCTCGCTCTTAACCTCCTGACCACCGCCGCCCCCAGATCCG
CCGGAGCTGCCCACCGTTTTCGTTGTCGTAGTGGTGGTAAACTTGATGAC
GGGCTTGGGAATGGTCACCACCTGCTGCTTGGCCACCACGGAGTGTGGCC
TCTTCGGACCATTGGCGCTGGAGACGGGCTTAACGACGGTCTTCAGTGGA
CGGCCCTCCACCGCCGACTTGGTCATTTTCTTGGGCTGATTAGTGGCCCG
CAGTTTGTAGTTGACGCCGGTGAGACAGTAGCGGTCGGGCGGCAGTCGGA
GACCGCAGTGCGGCTTAATGGGTGGCAGGGGCATGCTGTTGCGCACGTCG
GCCACCTTGGCTAGAACGTGGCGCTCCAACGGCCCGGTGAAGCTCTTGTC
CAGCGTAACCTCGGTGGCCAGACGCACGTCGTCCAAGTCGATGGTCTTCT
TGCGCGCATGGTTGGCGTACACCTTGGCGTCGTCCAGAATGCAGGTTACA
TAGCGGAAGGTGAACTCCAGCAGTTGGTTGACCACGCGCGGCTCGTACTC
CTGGACATTCAGCTCCTTCAGGATGGACATGTCGACTGATAACT

BS01036.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG6474-PA 837 e(y)1-RA 75..837 781..19 3815 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-RA 1124 CG6474-RA 173..939 781..15 3835 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17842474..17843163 704..15 3450 100 Minus
X 23542271 X 17842333..17842410 781..704 390 100 Minus
Blast to na_te.dros performed 2015-02-10 19:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
Doc4-element 2791 Doc4-element DOC4 2791bp 1457..1487 72..102 110 83.9 Plus

BS01036.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:53 Download gff for BS01036.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6474-PA 70..837 19..786 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:20 Download gff for BS01036.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6474-PA 70..837 19..786 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:26:13 Download gff for BS01036.3prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 168..939 15..786 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:43:26 Download gff for BS01036.3prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 168..939 15..786 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:43:26 Download gff for BS01036.3prime
Subject Subject Range Query Range Percent Splice Strand
X 17842328..17842409 705..786 97 -> Minus
X 17842474..17843163 15..704 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:26:13 Download gff for BS01036.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17736361..17736442 705..786 97 -> Minus
arm_X 17736507..17737196 15..704 100   Minus

BS01036.5prime Sequence

794 bp (749 high quality bases) assembled on 2005-11-30

> BS01036.5prime
GAAGTTATCAGTCGACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGT
ACGAGCCGCGCGTGGTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTA
ACCTGCATTCTGGACGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAA
GACCATCGACTTGGACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACA
AGAGCTTCACCGGGCCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGAC
GTGCGCAACAGCATGCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCG
ACTGCCGCCCGACCGCTACTGTCTCACCGGCGTCAACTACAAACTGCGGG
CCACTAATCAGCCCAAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCA
CTGAAGACCGTCGTTAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCC
ACACTCCGTGGTGGCCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCA
TCAAGTTTACCACCACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGA
TCTGGGGGCGGCGGTGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGG
CGGAGATCTCAAGATGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCA
TCGCTGGCGCATCCGGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGA
GGAGGAGGATCATCTGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGA
GGAGGAGTTTGAGTTTGTGACCAACTAGCGAAGCTTTCTAGACC

BS01036.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6474-PA 837 e(y)1-RA 75..837 16..778 3815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-RA 1124 CG6474-RA 173..939 16..782 3835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:24:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17842474..17843163 93..782 3450 100 Plus
X 23542271 X 17842333..17842410 16..93 390 100 Plus
Blast to na_te.dros performed 2015-02-11 15:24:43
Subject Length Description Subject Range Query Range Score Percent Strand
Doc4-element 2791 Doc4-element DOC4 2791bp 1457..1487 725..695 110 83.9 Minus

BS01036.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:55 Download gff for BS01036.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6474-PA 70..837 11..778 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:22 Download gff for BS01036.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6474-PA 70..837 11..778 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:24:32 Download gff for BS01036.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 168..939 11..782 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:23:34 Download gff for BS01036.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 168..939 11..782 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:23:34 Download gff for BS01036.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17842328..17842409 11..92 97 -> Plus
X 17842474..17843163 93..782 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:24:32 Download gff for BS01036.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17736361..17736442 11..92 97 -> Plus
arm_X 17736507..17737196 93..782 100   Plus

BS01036.complete Sequence

796 bp (796 high quality bases) assembled on 2005-06-23

> BS01036.complete
GAAGTTATCAGTCGACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGT
ACGAGCCGCGCGTGGTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTA
ACCTGCATTCTGGACGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAA
GACCATCGACTTGGACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACA
AGAGCTTCACCGGGCCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGAC
GTGCGCAACAGCATGCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCG
ACTGCCGCCCGACCGCTACTGTCTCACCGGCGTCAACTACAAACTGCGGG
CCACTAATCAGCCCAAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCA
CTGAAGACCGTCGTTAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCC
ACACTCCGTGGTGGCCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCA
TCAAGTTTACCACCACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGA
TCTGGGGGCGGCGGTGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGG
CGGAGATCTCAAGATGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCA
TCGCTGGCGCATCCGGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGA
GGAGGAGGATCATCTGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGA
GGAGGAGTTTGAGTTTGTGACCAACTAGCGAAGCTTTCTAGACCAT

BS01036.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-RA 837 CG6474-PA 75..837 16..778 3815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-RA 1124 CG6474-RA 173..939 16..782 3835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17842474..17843163 93..782 3450 100 Plus
X 23542271 X 17842333..17842410 16..93 390 100 Plus
Blast to na_te.dros performed 2014-11-27 16:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Doc4-element 2791 Doc4-element DOC4 2791bp 1457..1487 725..695 110 83.9 Minus

BS01036.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:36 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 70..837 11..778 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:38 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 154..925 11..782 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:22 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 174..937 17..780 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:36 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 154..925 11..782 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:44 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 174..937 17..780 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:44 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
X 17842334..17842409 17..92 100 -> Plus
X 17842474..17843161 93..780 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:22 Download gff for BS01036.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17736367..17736442 17..92 100 -> Plus
arm_X 17736507..17737194 93..780 100   Plus

BS01036.pep Sequence

Translation from 16 to 777

> BS01036.pep
MSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLD
DVRLATEVTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDR
YCLTGVNYKLRATNQPKKMTKSAVEGRPLKTVVKPVSSANGPKRPHSVVA
KQQVVTIPKPVIKFTTTTTTKTVGSSGGSGGGGGQEVKSESTGAGGDLKM
EVDSDAAAVGSIAGASGSGAGSASGGGGGGGSSGVGVAVKREREEEEFEF
VTN*

BS01036.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-PA 278 CG6474-PA 26..278 1..253 1293 100 Plus