Clone Sequence Records
BS01036.3prime Sequence
794 bp (793 high quality bases) assembled on 2005-11-30
> BS01036.3prime
ATGGTCTAGAAAGCTTCGCTAGTTGGTCACAAACTCAAACTCCTCCTCCT
CACGTTCCCGCTTGACGGCCACTCCAACGCCAGATGATCCTCCTCCTCCT
CCTCCTCCGCTGGCACTTCCTGCTCCCGAACCGGATGCGCCAGCGATGCT
GCCCACGGCCGCCGCATCGCTGTCCACCTCCATCTTGAGATCTCCGCCGG
CGCCGGTGCTCTCGCTCTTAACCTCCTGACCACCGCCGCCCCCAGATCCG
CCGGAGCTGCCCACCGTTTTCGTTGTCGTAGTGGTGGTAAACTTGATGAC
GGGCTTGGGAATGGTCACCACCTGCTGCTTGGCCACCACGGAGTGTGGCC
TCTTCGGACCATTGGCGCTGGAGACGGGCTTAACGACGGTCTTCAGTGGA
CGGCCCTCCACCGCCGACTTGGTCATTTTCTTGGGCTGATTAGTGGCCCG
CAGTTTGTAGTTGACGCCGGTGAGACAGTAGCGGTCGGGCGGCAGTCGGA
GACCGCAGTGCGGCTTAATGGGTGGCAGGGGCATGCTGTTGCGCACGTCG
GCCACCTTGGCTAGAACGTGGCGCTCCAACGGCCCGGTGAAGCTCTTGTC
CAGCGTAACCTCGGTGGCCAGACGCACGTCGTCCAAGTCGATGGTCTTCT
TGCGCGCATGGTTGGCGTACACCTTGGCGTCGTCCAGAATGCAGGTTACA
TAGCGGAAGGTGAACTCCAGCAGTTGGTTGACCACGCGCGGCTCGTACTC
CTGGACATTCAGCTCCTTCAGGATGGACATGTCGACTGATAACT
BS01036.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6474-PA | 837 | e(y)1-RA | 75..837 | 781..19 | 3815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:35:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)1-RA | 1124 | CG6474-RA | 173..939 | 781..15 | 3835 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:35:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17842474..17843163 | 704..15 | 3450 | 100 | Minus |
X | 23542271 | X | 17842333..17842410 | 781..704 | 390 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 19:35:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 72..102 | 110 | 83.9 | Plus |
BS01036.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:53 Download gff for
BS01036.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6474-PA | 70..837 | 19..786 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:20 Download gff for
BS01036.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6474-PA | 70..837 | 19..786 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:26:13 Download gff for
BS01036.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 168..939 | 15..786 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:43:26 Download gff for
BS01036.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 168..939 | 15..786 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:43:26 Download gff for
BS01036.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17842328..17842409 | 705..786 | 97 | -> | Minus |
X | 17842474..17843163 | 15..704 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:26:13 Download gff for
BS01036.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17736361..17736442 | 705..786 | 97 | -> | Minus |
arm_X | 17736507..17737196 | 15..704 | 100 | | Minus |
BS01036.5prime Sequence
794 bp (749 high quality bases) assembled on 2005-11-30
> BS01036.5prime
GAAGTTATCAGTCGACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGT
ACGAGCCGCGCGTGGTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTA
ACCTGCATTCTGGACGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAA
GACCATCGACTTGGACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACA
AGAGCTTCACCGGGCCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGAC
GTGCGCAACAGCATGCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCG
ACTGCCGCCCGACCGCTACTGTCTCACCGGCGTCAACTACAAACTGCGGG
CCACTAATCAGCCCAAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCA
CTGAAGACCGTCGTTAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCC
ACACTCCGTGGTGGCCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCA
TCAAGTTTACCACCACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGA
TCTGGGGGCGGCGGTGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGG
CGGAGATCTCAAGATGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCA
TCGCTGGCGCATCCGGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGA
GGAGGAGGATCATCTGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGA
GGAGGAGTTTGAGTTTGTGACCAACTAGCGAAGCTTTCTAGACC
BS01036.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6474-PA | 837 | e(y)1-RA | 75..837 | 16..778 | 3815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:24:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)1-RA | 1124 | CG6474-RA | 173..939 | 16..782 | 3835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:24:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17842474..17843163 | 93..782 | 3450 | 100 | Plus |
X | 23542271 | X | 17842333..17842410 | 16..93 | 390 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 15:24:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 725..695 | 110 | 83.9 | Minus |
BS01036.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:58:55 Download gff for
BS01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6474-PA | 70..837 | 11..778 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:22 Download gff for
BS01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6474-PA | 70..837 | 11..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:24:32 Download gff for
BS01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 168..939 | 11..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:23:34 Download gff for
BS01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 168..939 | 11..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:23:34 Download gff for
BS01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17842328..17842409 | 11..92 | 97 | -> | Plus |
X | 17842474..17843163 | 93..782 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:24:32 Download gff for
BS01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17736361..17736442 | 11..92 | 97 | -> | Plus |
arm_X | 17736507..17737196 | 93..782 | 100 | | Plus |
BS01036.complete Sequence
796 bp (796 high quality bases) assembled on 2005-06-23
> BS01036.complete
GAAGTTATCAGTCGACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGT
ACGAGCCGCGCGTGGTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTA
ACCTGCATTCTGGACGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAA
GACCATCGACTTGGACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACA
AGAGCTTCACCGGGCCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGAC
GTGCGCAACAGCATGCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCG
ACTGCCGCCCGACCGCTACTGTCTCACCGGCGTCAACTACAAACTGCGGG
CCACTAATCAGCCCAAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCA
CTGAAGACCGTCGTTAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCC
ACACTCCGTGGTGGCCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCA
TCAAGTTTACCACCACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGA
TCTGGGGGCGGCGGTGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGG
CGGAGATCTCAAGATGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCA
TCGCTGGCGCATCCGGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGA
GGAGGAGGATCATCTGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGA
GGAGGAGTTTGAGTTTGTGACCAACTAGCGAAGCTTTCTAGACCAT
BS01036.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:54:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)1-RA | 837 | CG6474-PA | 75..837 | 16..778 | 3815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)1-RA | 1124 | CG6474-RA | 173..939 | 16..782 | 3835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:54:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17842474..17843163 | 93..782 | 3450 | 100 | Plus |
X | 23542271 | X | 17842333..17842410 | 16..93 | 390 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 16:54:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 725..695 | 110 | 83.9 | Minus |
BS01036.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:36 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 70..837 | 11..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:38 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 154..925 | 11..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:22 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 174..937 | 17..780 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:36 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 154..925 | 11..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:44 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
e(y)1-RA | 174..937 | 17..780 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:44 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17842334..17842409 | 17..92 | 100 | -> | Plus |
X | 17842474..17843161 | 93..780 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:22 Download gff for
BS01036.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17736367..17736442 | 17..92 | 100 | -> | Plus |
arm_X | 17736507..17737194 | 93..780 | 100 | | Plus |
BS01036.pep Sequence
Translation from 16 to 777
> BS01036.pep
MSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLD
DVRLATEVTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDR
YCLTGVNYKLRATNQPKKMTKSAVEGRPLKTVVKPVSSANGPKRPHSVVA
KQQVVTIPKPVIKFTTTTTTKTVGSSGGSGGGGGQEVKSESTGAGGDLKM
EVDSDAAAVGSIAGASGSGAGSASGGGGGGGSSGVGVAVKREREEEEFEF
VTN*
BS01036.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:37:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
e(y)1-PA | 278 | CG6474-PA | 26..278 | 1..253 | 1293 | 100 | Plus |