Clone Sequence Records
BS01040.3prime Sequence
757 bp (756 high quality bases) assembled on 2005-11-30
> BS01040.3prime
ATGGTCTAGAAAGCTTCGTCATGCGTAGTGGGGATAGCTGCTCAGGTGGG
GCGCTACGTGGGAGGGGGTCACGTGGCTCATCGAGTGCGGCTGGTAGAGA
TTCGTGGCCGGACTGCCCCAGTTGCCCCACGAGGCGGCCGACGGGAAGAT
CGAGGCCGAGGATGAGGTCATGCCATGATGCGGACTCATGAACGAGCTGA
GCTTGGCGCTGTGGTGATATGGTGTCATGAACAAGTCGCTCTGGTATTTG
TAGGTGGGATCGCTGGCCGCCGGCTGAGTAGCAGCTGCCAGGCCTTGGAA
ATCGAATTTGTACGCATACCGCTTGCCGTGCACCTTGGTCATTATATTTT
TGTCGTAGTAGTACCTCAAGGCGCGACTGAGCTTATCGTAGTTCATGTTG
GGCTTGGACTTCCTCTCGCCCCAGCGGCGGGCGACCTCGTCGGGATCGGT
TAGCTTAAACTCGCCGTTGGTGCCCTCCCAGGTGATGCAGCTGGCGTTAT
TGGAGTCCGAGAGCAGCTCGAGAAGGAACTGCCACAGCTGGATTTGGCCA
GAGCCTGAGCTGGCCAGTCTGCTGCTGGTGGGTCCGAACATTTGATATGG
ATCAGGTTGCCGTAGTTGTGAGTGCGGATCATGTTTGATGCCCAGGGCGT
TCGAGCTGTAACCTTGCGATTGTGTCGAACTGTGGGAGCCCCACGACGAT
TTGTACGAGGAATCTGCGAAGAGCATCGAGAAGTTGCTGAAGCTGCCCGT
GGAGCGT
BS01040.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7018-PB | 774 | Ets65A-RB | 36..774 | 757..19 | 3695 | 100 | Minus |
| CG7018-PA | 1473 | Ets65A-RA | 779..1473 | 713..19 | 3475 | 100 | Minus |
| CG2914-PA | 1428 | Ets21C-RA | 940..998 | 366..308 | 170 | 91.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:02:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-RB | 2177 | CG7018-RB | 689..1428 | 757..18 | 3700 | 100 | Minus |
| Ets65A-RE | 4190 | CG7018-RE | 1695..2390 | 713..18 | 3480 | 100 | Minus |
| Ets65A-RD | 4190 | CG7018-RD | 1695..2390 | 713..18 | 3480 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6121492..6121702 | 366..156 | 1055 | 100 | Minus |
| 3L | 28110227 | 3L | 6118956..6119150 | 557..363 | 975 | 100 | Minus |
| 3L | 28110227 | 3L | 6121975..6122113 | 156..18 | 695 | 100 | Minus |
| 3L | 28110227 | 3L | 6114292..6114353 | 664..603 | 310 | 100 | Minus |
| 3L | 28110227 | 3L | 6112368..6112423 | 716..661 | 280 | 100 | Minus |
| 2L | 23513712 | 2L | 547993..548162 | 380..549 | 280 | 77.6 | Plus |
| 3L | 28110227 | 3L | 6115954..6116003 | 603..554 | 250 | 100 | Minus |
| 2L | 23513712 | 2L | 547825..547902 | 289..366 | 240 | 87.2 | Plus |
| 3L | 28110227 | 3L | 6112155..6112198 | 757..714 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-01 09:02:12 has no hits.
BS01040.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:59:00 Download gff for
BS01040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7018-PB | 36..774 | 19..757 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:29 Download gff for
BS01040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7018-PB | 36..774 | 19..757 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:13:37 Download gff for
BS01040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 689..1428 | 18..757 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:53:30 Download gff for
BS01040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 689..1428 | 18..757 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:53:30 Download gff for
BS01040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6112155..6112198 | 714..757 | 100 | -> | Minus |
| 3L | 6112371..6112421 | 663..713 | 100 | -> | Minus |
| 3L | 6114294..6114353 | 603..662 | 100 | -> | Minus |
| 3L | 6115955..6116002 | 555..602 | 100 | -> | Minus |
| 3L | 6118959..6119148 | 365..554 | 100 | -> | Minus |
| 3L | 6121494..6121702 | 156..364 | 100 | -> | Minus |
| 3L | 6121976..6122113 | 18..155 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:13:37 Download gff for
BS01040.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6105255..6105298 | 714..757 | 100 | -> | Minus |
| arm_3L | 6105471..6105521 | 663..713 | 100 | -> | Minus |
| arm_3L | 6107394..6107453 | 603..662 | 100 | -> | Minus |
| arm_3L | 6109055..6109102 | 555..602 | 100 | -> | Minus |
| arm_3L | 6112059..6112248 | 365..554 | 100 | -> | Minus |
| arm_3L | 6114594..6114802 | 156..364 | 100 | -> | Minus |
| arm_3L | 6115076..6115213 | 18..155 | 100 | | Minus |
BS01040.5prime Sequence
806 bp (677 high quality bases) assembled on 2005-11-30
> BS01040.5prime
GAAGTTATCAGTCGACATGCTGGACATCAAGTCCTCCGCCGATTACTTGT
CACGCTCCACGGGCAGCTTCAGCAACTTCTCGATGCTCTTCGCAGATTCC
TCGTACAAATCGTCGTGGGGCTCCCACAGTTCGACACAATCGCAAGGTTA
CAGCTCGAACGCCCTGGGCATCAAACATGATCCGCACTCACAACTACGGC
AACCTGATCCATATCAAATGTTCGGACCCACCAGCAGCAGACTGGCCAGC
TCAGGCTCTGGCCAAATCCAGCTGTGGCAGTTCCTTCTCGAGCTGCTCTC
GGACTCCAATAACGCCAGCTGCATCACCTGGGAGGGCACCAACGGCGAGT
TTAAGCTAACCGATCCCGACGAGGTCGCCCGCCGCTGGGGCGAGAGGAAG
TCCAAGCCCAACATGAACTACGATAAGCTCAGTCGCGCCTTGAGGTACTA
CTACGACAAAAATATAATGACCAAGGTGCACGGCAAGCGGTATGCGTACA
AATTCGATTTCCAAGGCCTGGCAGCTGCTACTCAGCCGGCGGCCAGCGAT
CCCACCTACAAATACCAGAGCGACTTGTTCATGACACCATATCACCACAG
CGCCAAGCTCAGCTCGTTCATGAGTCCGCATCATGGCATGACCTCATCCT
CGGCCTCGATCTTCCCGTCGGCCGCCTCGTGGGGCAACTGGGGCAGTCCG
GCCACGAATCTCTACCAGCCGCACTCGATGAGCCACGTGACCCCCTCCCA
CGTAGCGCCTCACCTGAGCAGCTATCCCCACTACGCATGACGAAGCTTTC
TAGACC
BS01040.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7018-PB | 774 | Ets65A-RB | 1..774 | 17..790 | 3845 | 99.8 | Plus |
| CG7018-PA | 1473 | Ets65A-RA | 779..1473 | 96..790 | 3450 | 99.8 | Plus |
| CG2914-PA | 1428 | Ets21C-RA | 940..998 | 443..501 | 170 | 91.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-RB | 2177 | CG7018-RB | 654..1428 | 17..791 | 3860 | 99.9 | Plus |
| Ets65A-RE | 4190 | CG7018-RE | 1695..2390 | 96..791 | 3465 | 99.9 | Plus |
| Ets65A-RD | 4190 | CG7018-RD | 1695..2390 | 96..791 | 3465 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6121492..6121702 | 443..653 | 1055 | 100 | Plus |
| 3L | 28110227 | 3L | 6118956..6119150 | 252..446 | 975 | 100 | Plus |
| 3L | 28110227 | 3L | 6121975..6122113 | 653..791 | 680 | 99.3 | Plus |
| 3L | 28110227 | 3L | 6112120..6112198 | 17..95 | 395 | 100 | Plus |
| 3L | 28110227 | 3L | 6114292..6114353 | 145..206 | 310 | 100 | Plus |
| 3L | 28110227 | 3L | 6112368..6112423 | 93..148 | 280 | 100 | Plus |
| 2L | 23513712 | 2L | 547993..548162 | 429..260 | 280 | 77.6 | Minus |
| 3L | 28110227 | 3L | 6115954..6116003 | 206..255 | 250 | 100 | Plus |
| 2L | 23513712 | 2L | 547825..547902 | 520..443 | 240 | 87.2 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:08:11 has no hits.
BS01040.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:59:01 Download gff for
BS01040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7018-PB | 1..774 | 17..790 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:30 Download gff for
BS01040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7018-PB | 1..774 | 17..790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:41:19 Download gff for
BS01040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 654..1428 | 17..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:10:13 Download gff for
BS01040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 654..1428 | 17..791 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:10:13 Download gff for
BS01040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6121976..6122113 | 654..791 | 99 | | Plus |
| 3L | 6112120..6112198 | 17..95 | 100 | -> | Plus |
| 3L | 6112371..6112421 | 96..146 | 100 | -> | Plus |
| 3L | 6114294..6114353 | 147..206 | 100 | -> | Plus |
| 3L | 6115955..6116002 | 207..254 | 100 | -> | Plus |
| 3L | 6118959..6119148 | 255..444 | 100 | -> | Plus |
| 3L | 6121494..6121702 | 445..653 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:41:19 Download gff for
BS01040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6105220..6105298 | 17..95 | 100 | -> | Plus |
| arm_3L | 6105471..6105521 | 96..146 | 100 | -> | Plus |
| arm_3L | 6107394..6107453 | 147..206 | 100 | -> | Plus |
| arm_3L | 6109055..6109102 | 207..254 | 100 | -> | Plus |
| arm_3L | 6112059..6112248 | 255..444 | 100 | -> | Plus |
| arm_3L | 6114594..6114802 | 445..653 | 100 | -> | Plus |
| arm_3L | 6115076..6115213 | 654..791 | 99 | | Plus |
BS01040.complete Sequence
808 bp (808 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634505
> BS01040.complete
GAAGTTATCAGTCGACATGCTGGACATCAAGTCCTCCGCCGATTACTTGT
CACGCTCCACGGGCAGCTTCAGCAACTTCTCGATGCTCTTCGCAGATTCC
TCGTACAAATCGTCGTGGGGCTCCCACAGTTCGACACAATCGCAAGGTTA
CAGCTCGAACGCCCTGGGCATCAAACATGATCCGCACTCACAACTACGGC
AACCTGATCCATATCAAATGTTCGGACCCACCAGCAGCAGACTGGCCAGC
TCAGGCTCTGGCCAAATCCAGCTGTGGCAGTTCCTTCTCGAGCTGCTCTC
GGACTCCAATAACGCCAGCTGCATCACCTGGGAGGGCACCAACGGCGAGT
TTAAGCTAACCGATCCCGACGAGGTCGCCCGCCGCTGGGGCGAGAGGAAG
TCCAAGCCCAACATGAACTACGATAAGCTCAGTCGCGCCTTGAGGTACTA
CTACGACAAAAATATAATGACCAAGGTGCACGGCAAGCGGTATGCGTACA
AATTCGATTTCCAAGGCCTGGCAGCTGCTACTCAGCCGGCGGCCAGCGAT
CCCACCTACAAATACCAGAGCGACTTGTTCATGACACCATATCACCACAG
CGCCAAGCTCAGCTCGTTCATGAGTCCGCATCATGGCATGACCTCATCCT
CGGCCTCGATCTTCCCGTCGGCCGCCTCGTGGGGCAACTGGGGCAGTCCG
GCCACGAATCTCTACCAGCCGCACTCGATGAGCCACGTGACCCCCTCCCA
CGTAGCGCCCCACCTGAGCAGCTATCCCCACTACGCATGACGAAGCTTTC
TAGACCAT
BS01040.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:50:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-RB | 774 | CG7018-PB | 1..774 | 17..790 | 3870 | 100 | Plus |
| Ets65A-RE | 2187 | CG7018-PE | 779..1474 | 96..791 | 3480 | 100 | Plus |
| Ets65A-RD | 1974 | CG7018-PD | 779..1474 | 96..791 | 3480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-RB | 2177 | CG7018-RB | 654..1428 | 17..791 | 3875 | 100 | Plus |
| Ets65A-RE | 4190 | CG7018-RE | 1695..2390 | 96..791 | 3480 | 100 | Plus |
| Ets65A-RD | 4190 | CG7018-RD | 1695..2390 | 96..791 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:50:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6121492..6121702 | 443..653 | 1055 | 100 | Plus |
| 3L | 28110227 | 3L | 6118956..6119150 | 252..446 | 975 | 100 | Plus |
| 3L | 28110227 | 3L | 6121975..6122113 | 653..791 | 695 | 100 | Plus |
| 3L | 28110227 | 3L | 6112120..6112198 | 17..95 | 395 | 100 | Plus |
| 3L | 28110227 | 3L | 6114292..6114353 | 145..206 | 310 | 100 | Plus |
| 3L | 28110227 | 3L | 6112368..6112423 | 93..148 | 280 | 100 | Plus |
| 2L | 23513712 | 2L | 547993..548162 | 429..260 | 280 | 77.6 | Minus |
| 3L | 28110227 | 3L | 6115954..6116003 | 206..255 | 250 | 100 | Plus |
| 2L | 23513712 | 2L | 547825..547902 | 520..443 | 240 | 87.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:50:28 has no hits.
BS01040.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:30 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 1..774 | 17..790 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:47 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 906..1680 | 17..791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:38:26 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 654..1428 | 17..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:30 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 906..1680 | 17..791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:43:46 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 654..1428 | 17..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:43:46 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6112120..6112198 | 17..95 | 100 | -> | Plus |
| 3L | 6112371..6112421 | 96..146 | 100 | -> | Plus |
| 3L | 6114294..6114353 | 147..206 | 100 | -> | Plus |
| 3L | 6115955..6116002 | 207..254 | 100 | -> | Plus |
| 3L | 6118959..6119148 | 255..444 | 100 | -> | Plus |
| 3L | 6121494..6121702 | 445..653 | 100 | -> | Plus |
| 3L | 6121976..6122113 | 654..792 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:38:26 Download gff for
BS01040.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6107394..6107453 | 147..206 | 100 | -> | Plus |
| arm_3L | 6109055..6109102 | 207..254 | 100 | -> | Plus |
| arm_3L | 6115076..6115213 | 654..792 | 99 | | Plus |
| arm_3L | 6112059..6112248 | 255..444 | 100 | -> | Plus |
| arm_3L | 6114594..6114802 | 445..653 | 100 | -> | Plus |
| arm_3L | 6105220..6105298 | 17..95 | 100 | -> | Plus |
| arm_3L | 6105471..6105521 | 96..146 | 100 | -> | Plus |
BS01040.pep Sequence
Translation from 16 to 789
> BS01040.pep
MLDIKSSADYLSRSTGSFSNFSMLFADSSYKSSWGSHSSTQSQGYSSNAL
GIKHDPHSQLRQPDPYQMFGPTSSRLASSGSGQIQLWQFLLELLSDSNNA
SCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNI
MTKVHGKRYAYKFDFQGLAAATQPAASDPTYKYQSDLFMTPYHHSAKLSS
FMSPHHGMTSSSASIFPSAASWGNWGSPATNLYQPHSMSHVTPSHVAPHL
SSYPHYA*
BS01040.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:29:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-PB | 257 | CG7018-PB | 1..257 | 1..257 | 1382 | 100 | Plus |
| Ets65A-PA | 490 | CG7018-PA | 261..490 | 28..257 | 1250 | 100 | Plus |
| Ets65A-PC | 512 | CG7018-PC | 283..512 | 28..257 | 1250 | 100 | Plus |
| Ets65A-PD | 657 | CG7018-PD | 261..490 | 28..257 | 1250 | 100 | Plus |
| Ets65A-PE | 728 | CG7018-PE | 261..490 | 28..257 | 1250 | 100 | Plus |
