Clone Sequence Records
BS01050.3prime Sequence
887 bp (806 high quality bases) assembled on 2005-11-30
> BS01050.3prime
ATGGTCTAGAAAGCTTCGTTACTTCATGTCAGTGCAAGTGAACTTGAGCT
CGTGCTTGCAGTACTTGGCCAAGCACTTGGAGTGATCGTGCAACTTGTTG
CGCATGATGACGCAGCCGTTCCGGCTTATCGAGTCCATGTACTCGCTGAA
GGTCGGCACCTTCCGGTATGTGGTCGGGGCGGAGTTCCAGTGCGAACTGC
TGCCGGATTCGATGGTCTGCGAGGAGTCCGAGAAGCTGGTCTTGAATGGC
TTGTAGTTCTTTTGGCACTCGTCGCTAGACATCTCGTAGCCAGCGGACGC
CTCCCGCTCCAGTTCGTTCATCACGTTCGAGCGGAACTCGTTGCAGGGTC
CACGTTCGCTCATCAGCTTGTTGGCGTTCTTGGACTCGTCCTCCGTCTTT
AGGCTCTCATAAATACCCTCCGGGTACTCGTTCATGTTACAGTAATCGAT
CTGATAGGTGGTGTTCATACGGTTGGTCTCCAGCCTGCGGCTCAGCTCCT
CCTTGGGCATGACCTTCAGGCGTTCATACAGATCCGGGTAGACTGTACGT
AAGATCTTGAGAAAGCGGTTGGGTTGCAGCTTAAAGCAATCTGTTTCCGC
GGAGAAGGCCATCTTGTCCACCTGGTCCTGAGTCAGCTGGGTGGGTATGA
TACGCGGATCCACCAGCTTTCCCATTGGCGCTATGCCCGTCCACTCGACG
CCGCCACAGTCCTTAGACGCGTTCGGCGGCATCATGATCTTGGACTCGTC
GACGCATTCGCACTCCTTGACCTGCGGACCACTGTGAGCCTCGGCGCCCC
TGGGCCGCGTTTAGAACTCGTACCGTTTGGCACTGGGCGGGACATAGTCG
TGCTGATAGGTTGATAGCATCATGTCGACTGATAACT
BS01050.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-PA | 855 | CG8813-RA | 63..855 | 811..19 | 3965 | 100 | Minus |
| CG8813-PA | 855 | CG8813-RA | 1..59 | 873..815 | 295 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-RA | 998 | CG8813-RA | 95..949 | 873..19 | 4230 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:03:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2869746..2870600 | 873..19 | 4230 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:03:39 has no hits.
BS01050.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:59:22 Download gff for
BS01050.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-PA | 1..855 | 19..873 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:54 Download gff for
BS01050.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-PA | 1..855 | 19..873 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 23:12:21 Download gff for
BS01050.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 86..949 | 19..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:24:28 Download gff for
BS01050.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 86..949 | 19..886 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:24:28 Download gff for
BS01050.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2869737..2870600 | 19..886 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 23:12:21 Download gff for
BS01050.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2869737..2870600 | 19..886 | 99 | | Minus |
BS01050.5prime Sequence
829 bp (726 high quality bases) assembled on 2005-11-30
> BS01050.5prime
GAAGTTATCAGTCGACATGATGCTATCAACCTATCAGCACGACTATGTCC
CGCCCAGTGCCAAACGGTACGAGTTTCTAACGCGGCCCAGGGGCGCCGAG
GCTCACAGTGGTCCGCAGGTCAAGGAGTGCGAATGCGTCGACGAGTCCAA
GATCATGATGCCGCCGAACGCGTCTAAGGACTGTGGCGGCGTCGAGTGGA
CGGGCATAGCGCCAATGGGAAAGCTGGTGGATCCGCGTATCATACCCACC
CAGCTGACTCAGGACCAGGTGGACAAGATGGCCTTCTCCGCGGAAACAGA
TTGCTTTAAGCTGCAACCCAACCGCTTTCTCAAGATCTTACGTACAGTCT
ACCCGGATCTGTATGAACGCCTGAAGGTCATGCCCAAGGAGGAGCTGAGC
CGCAGGCTGGAGACCAACCGTATGAACACCACCTATCAGATCGATTACTG
TAACATGAACGAGTACCCGGAGGGTATTTATGAGAGCCTAAAGACGGAGG
ACGAGTCCAAGAACGCCAACAAGCTGATGAGCGAACGTGGACCCTGCAAC
GAGTTCCGCTCGAACGTGATGAACGAACTGGAGCGGGAGGCGTCCGCTGG
CTACGAGATGTCTAGCGACGAGTGCCAAAAGAACTACAAGCCATTCAAGA
CCAGCTTCTCGGACTCCTCGCAGACCATCGAATCCGGCAGCAGTTCGCAC
TGGAACTCCGCCCCGACCACATACCGGAAGGTGCCGACCTTCAGCGAGTA
CATGGACTCGATAAGCCGGAACGGCTGCGTCATCATGCGCAAACAGTTGC
ACGATCACTCCNAGTGCTTTGGCCAGTAC
BS01050.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-PA | 855 | CG8813-RA | 1..803 | 17..819 | 3946 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:09:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-RA | 998 | CG8813-RA | 95..902 | 17..825 | 3979 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:09:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2869746..2870558 | 17..829 | 3979 | 99.3 | Plus |
Blast to na_te.dros performed on 2015-02-04 04:09:33 has no hits.
BS01050.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:59:23 Download gff for
BS01050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-PA | 1..813 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:05:55 Download gff for
BS01050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-PA | 1..813 | 17..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:08:02 Download gff for
BS01050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 86..907 | 4..829 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:49:41 Download gff for
BS01050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 86..907 | 4..829 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:49:41 Download gff for
BS01050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2869737..2870558 | 4..829 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:08:02 Download gff for
BS01050.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2869737..2870558 | 4..829 | 98 | | Plus |
BS01050.complete Sequence
889 bp (889 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634510
> BS01050.complete
GAAGTTATCAGTCGACATGATGCTATCAACCTATCAGCACGACTATGTCC
CGCCCAGTGCCAAACGGTACGAGTTTCTAACGCGGCCCAGGGGCGCCGAG
GCTCACAGTGGTCCGCAGGTCAAGGAGTGCGAATGCGTCGACGAGTCCAA
GATCATGATGCCGCCGAACGCGTCTAAGGACTGTGGCGGCGTCGAGTGGA
CGGGCATAGCGCCAATGGGAAAGCTGGTGGATCCGCGTATCATACCCACC
CAGCTGACTCAGGACCAGGTGGACAAGATGGCCTTCTCCGCGGAAACAGA
TTGCTTTAAGCTGCAACCCAACCGCTTTCTCAAGATCTTACGTACAGTCT
ACCCGGATCTGTATGAACGCCTGAAGGTCATGCCCAAGGAGGAGCTGAGC
CGCAGGCTGGAGACCAACCGTATGAACACCACCTATCAGATCGATTACTG
TAACATGAACGAGTACCCGGAGGGTATTTATGAGAGCCTAAAGACGGAGG
ACGAGTCCAAGAACGCCAACAAGCTGATGAGCGAACGTGGACCCTGCAAC
GAGTTCCGCTCGAACGTGATGAACGAACTGGAGCGGGAGGCGTCCGCTGG
CTACGAGATGTCTAGCGACGAGTGCCAAAAGAACTACAAGCCATTCAAGA
CCAGCTTCTCGGACTCCTCGCAGACCATCGAATCCGGCAGCAGTTCGCAC
TGGAACTCCGCCCCGACCACATACCGGAAGGTGCCGACCTTCAGCGAGTA
CATGGACTCGATAAGCCGGAACGGCTGCGTCATCATGCGCAACAAGTTGC
ACGATCACTCCAAGTGCTTGGCCAAGTACTGCAAGCACGAGCTCAAGTTC
ACTTGCACTGACATGAAGTAACGAAGCTTTCTAGACCAT
BS01050.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-RA | 855 | CG8813-PA | 1..855 | 17..871 | 4275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-RA | 998 | CG8813-RA | 95..949 | 17..871 | 4275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2869746..2870600 | 17..871 | 4275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:13:22 has no hits.
BS01050.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:36 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 1..855 | 17..871 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:56 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 86..949 | 4..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:37:03 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 95..952 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:36 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 86..949 | 4..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:06 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8813-RA | 95..952 | 17..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:16:06 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2869746..2870603 | 17..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:37:03 Download gff for
BS01050.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2869746..2870603 | 17..873 | 99 | | Plus |
BS01050.pep Sequence
Translation from 16 to 870
> BS01050.pep
MMLSTYQHDYVPPSAKRYEFLTRPRGAEAHSGPQVKECECVDESKIMMPP
NASKDCGGVEWTGIAPMGKLVDPRIIPTQLTQDQVDKMAFSAETDCFKLQ
PNRFLKILRTVYPDLYERLKVMPKEELSRRLETNRMNTTYQIDYCNMNEY
PEGIYESLKTEDESKNANKLMSERGPCNEFRSNVMNELEREASAGYEMSS
DECQKNYKPFKTSFSDSSQTIESGSSSHWNSAPTTYRKVPTFSEYMDSIS
RNGCVIMRNKLHDHSKCLAKYCKHELKFTCTDMK*
BS01050.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8813-PA | 284 | CG8813-PA | 1..284 | 1..284 | 1529 | 100 | Plus |
