Clone BS01102 Report

Search the DGRC for BS01102

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:11
Well:2
Vector:pDNR-Dual
Associated Gene/Transcripttx-RA
Protein status:BS01102.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01102.3prime Sequence

945 bp (806 high quality bases) assembled on 2005-11-30

> BS01102.3prime
ATGGTCTAGAAAGCTTCGTCACGTGAGAAACATATCCGGAAAATCGCTGT
GCAGCAGGTCGAATGGATACCCATCCAGAGCGGAGAACGAACTAATACAG
GCCGACGGCTGCTGATCGCTGGCAAAGTCGAAGGAATCCTTGGAACTCTG
GTCCAGTAATCGCAGACTGAGCTCCACATCCGACTTCTCCAGACCCGACA
TGGGCAGATCACCTCGGCAACCGGGCAACAGGGATTCCCCGCTGCCAGTG
AGTAGACTTCCATAGCCGGGACTTAGACAGGAGAGGGAATCCCCATCGGA
GGTATCCAGAAGCAGAGAGTCCAGGGCGCTGATTCCGTTCAATCCCACCA
GACTGTCCAGCTCCAGTCCCGGACTGCTACTGCTGCTGTGGCTGTTCGAT
GACGAGGAGAGCGATGCGTAGGCGGAGGAGGCAGGCGATCCAATCGAAGA
GGTGGCGTAGCACGACTCACCGGAACTTATCGGTGGTATCTGGGGCACTA
TCTTGGCCTGCTTTTGGCTCTGTCTTTTGCTCGCGGCGGAACTCTTCTTA
CCACTGCCCTTTGTCTTGGCTGGCTTCTTGGCAACTGGAACGGGTAGCTC
CACCTCGGCTTCCTCGTTCGCTTCCAAGTCCACTCTCGCCTCCCGATTGG
CACTCTCCTCCAGACACTCCCCTATAAATTCGCTTTCATAGCTGGGATCT
CGAATCGAGTCGGTCAGCATGGTGATGTACTTCATGGCCAGTCTCAGGGT
GGTGATTTTGGTCAGCTTCTCGTTGGTATTGGCCGCATCCTCGCCCTTGA
TCGCTTCGGGGAACACATGCCTCAGTGTCTCAAAGGGCGTGTTGATCTCA
CGCATTCTGGTTCGCTCCCTGGCATTCGCTGTTTTCCGACGGTATTTACT
CAGTGGCGGTGCTTTCGTCTTGGACTTGNTGGGTGCATTTTTCCT

BS01102.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG5441-PA 1155 dei-RA 364..1155 810..19 3960 100 Minus
CG5441-PA 1155 dei-RA 229..357 945..817 601 98.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
tx-RB 2411 CG5441-RB 1188..2116 945..17 4574 99.6 Minus
tx-RA 1652 CG5441-RA 429..1357 945..17 4574 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26447768..26448696 945..17 4544 99.2 Minus
Blast to na_te.dros performed on 2015-01-30 16:34:55 has no hits.

BS01102.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:00:47 Download gff for BS01102.3prime
Subject Subject Range Query Range Percent Splice Strand
dei-PA 229..1155 19..945 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:07:43 Download gff for BS01102.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5441-PA 229..1155 19..945 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:27:03 Download gff for BS01102.3prime
Subject Subject Range Query Range Percent Splice Strand
tx-RA 770..1707 8..945 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:52:55 Download gff for BS01102.3prime
Subject Subject Range Query Range Percent Splice Strand
tx-RA 429..1366 8..945 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:52:55 Download gff for BS01102.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 26447768..26448705 8..945 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:27:03 Download gff for BS01102.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22273490..22274427 8..945 99   Minus

BS01102.5prime Sequence

904 bp (764 high quality bases) assembled on 2005-11-30

> BS01102.5prime
GAAGTTATCAGTCGACATGAAGTCCAATACGTACGAACTGCACAACTACG
CCGATCTGAATGACATGGCCAGAGCGACGGACTCCAAGGATTCGCGCAAA
AGGAAGACGGCCAGTGCTCGGGGCGAGAAGTATTCCCTGCGACAGAAGCG
ACAAAAGAGGGGCTCCAACGAGGATGGGGAGTCAGCCAACCTGGCTGACT
TTCAACTAGAATTAGATCCCATAGCGGAGCCGGCTAGTAAATCGAGGAAA
AATGCACCCACCAAGTCCAAGACGAAAGCACCGCCACTGAGTAAATACCG
TCGGAAAACAGCGAATGCCAGGGAGCGAACCAGAATGCGTGAGATCAACA
CGGCCTTTGAGACACTGAGGCATTGTGTTCCCGAAGCGATCAAGGGCGAG
GATGCGGCCAATACCAACGAGAAGCTGACCAAAATCACCACCCTGAGACT
GGCCATGAAGTACATCACCATGCTGACCGACTCGATTCGAGATCCCAGCT
ATGAAAGCGAATTTATAGGGGAGTGTCTGGAGGAGAGTGCCAATCGGGAG
GCGAGAGTGGACTTGGAAGCGAACGAGGAAGCCGAGGTGGAGCTACCCGT
TCCAGTTGCCAAGAAGCCAGCCAAGACAAAGGGCAGTGGTAAGAAGAGTT
CCGCCGCGAGCAAAAGACAGAGCCAAAAGCAGGCCAAGATAGTGCCCCAG
ATACCACCGATAAGTTCCGGTGAGTCGTGCTACGCCACCTCTTCGATTGG
ATCGCCTGCCTCCTCCCGCTACGCATCGCTCTCCTCGTCATCGAACAGCC
ACAGCAGCAGTAGCAGTCCGGGACTGGAGCTGGACAGTCTGGTGGGATTG
AACGGAATCAGCGCCCTGNACTCTCTGCTTCTGGATACCTCCGATGGGGA
TTCC

BS01102.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG5441-PA 1155 dei-RA 1..888 17..904 4371 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
tx-RB 2411 CG5441-RB 960..1847 17..904 4399 99.7 Plus
tx-RA 1652 CG5441-RA 201..1088 17..904 4399 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26447540..26448427 17..904 4399 99.7 Plus
Blast to na_te.dros performed on 2015-02-12 05:41:46 has no hits.

BS01102.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:00:49 Download gff for BS01102.5prime
Subject Subject Range Query Range Percent Splice Strand
dei-PA 1..888 17..904 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:07:45 Download gff for BS01102.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5441-PA 1..888 17..904 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:35:47 Download gff for BS01102.5prime
Subject Subject Range Query Range Percent Splice Strand
tx-RA 542..1429 17..904 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:39:54 Download gff for BS01102.5prime
Subject Subject Range Query Range Percent Splice Strand
tx-RA 201..1088 17..904 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:39:54 Download gff for BS01102.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26447536..26448427 12..904 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:35:47 Download gff for BS01102.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22273258..22274149 12..904 99   Plus

BS01102.complete Sequence

1189 bp (1189 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634527

> BS01102.complete
GAAGTTATCAGTCGACATGAAGTCCAATACGTACGAACTGCACAACTACG
CCGATCTGAATGACATGGCCAGAGCGACGGACTCCAAGGATTCGCGCAAA
AGGAAGACGGCCAGTGCTCGGGGCGAGAAGTATTCCCTGCGACAGAAGCG
ACAAAAGAGGGGCTCCAACGAGGATGGGGAGTCAGCCAACCTGGCTGACT
TTCAACTAGAATTAGATCCCATAGCGGAGCCGGCTAGTAAATCGAGGAAA
AATGCACCCACCAAGTCCAAGACGAAAGCACCGCCACTGAGTAAATACCG
TCGGAAAACAGCGAATGCCAGGGAGCGAACCAGAATGCGTGAGATCAACA
CGGCCTTTGAGACACTGAGGCATTGTGTTCCCGAAGCGATCAAGGGCGAG
GATGCGGCCAATACCAACGAGAAGCTGACCAAAATCACCACCCTGAGACT
GGCCATGAAGTACATCACCATGCTGACCGACTCGATTCGAGATCCCAGCT
ATGAAAGCGAATTTATAGGGGAGTGTCTGGAGGAGAGTGCCAATCGGGAG
GCGAGAGTGGACTTGGAAGCGAACGAGGAAGCCGAGGTGGAGCTACCCGT
TCCAGTTGCCAAGAAGCCAGCCAAGACAAAGGGCAGTGGTAAGAAGAGTT
CCGCCGCGAGCAAAAGACAGAGCCAAAAGCAGGCCAAGATAGTGCCCCAG
ATACCACCGATAAGTTCCGGTGAGTCGTGCTACGCCACCTCTTCGATTGG
ATCGCCTGCCTCCTCCGCCTACGCATCGCTCTCCTCGTCATCGAACAGCC
ACAGCAGCAGTAGCAGTCCGGGACTGGAGCTGGACAGTCTGGTGGGATTG
AACGGAATCAGCGCCCTGGACTCTCTGCTTCTGGATACCTCCGATGGGGA
TTCCCTCTCCTGTCTAAGTCCCGGCTATGGAAGTCTACTCACTGGCAGCG
GGGAATCCCTGTTGCCCGGTTGCCGAGGTGATCTGCCCATGTCGGGTCTG
GAGAAGTCGGATGTGGAGCTCAGTCTGCGATTACTGGACCAGAGTTCCAA
GGATTCCTTCGACTTTGCCAGCGATCAGCAGCCGTCGGCCTGTATTAGTT
CGTTCTCCGCTCTGGATGGGTATCCATTCGACCTGCTGCACAGCGATTTT
CCGGATATGTTTCTCACGTGACGAAGCTTTCTAGACCAT

BS01102.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
tx-RB 1155 CG5441-PB 1..1155 17..1171 5775 100 Plus
tx-RA 1155 CG5441-PA 1..1155 17..1171 5775 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
tx-RB 2411 CG5441-RB 960..2116 17..1173 5785 100 Plus
tx-RA 1652 CG5441-RA 201..1357 17..1173 5785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26447540..26448696 17..1173 5785 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:47:52 has no hits.

BS01102.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:02 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
dei-RA 1..1155 17..1171 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:11 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
dei-RA 411..1576 17..1182 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:34:22 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
tx-RA 542..1698 17..1173 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:02 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
dei-RA 411..1576 17..1182 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:54 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
tx-RA 201..1357 17..1173 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:54 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26447540..26448696 17..1173 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:34:22 Download gff for BS01102.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22273262..22274418 17..1173 100   Plus

BS01102.pep Sequence

Translation from 16 to 1170

> BS01102.pep
MKSNTYELHNYADLNDMARATDSKDSRKRKTASARGEKYSLRQKRQKRGS
NEDGESANLADFQLELDPIAEPASKSRKNAPTKSKTKAPPLSKYRRKTAN
ARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYI
TMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKK
PAKTKGSGKKSSAASKRQSQKQAKIVPQIPPISSGESCYATSSIGSPASS
AYASLSSSSNSHSSSSSPGLELDSLVGLNGISALDSLLLDTSDGDSLSCL
SPGYGSLLTGSGESLLPGCRGDLPMSGLEKSDVELSLRLLDQSSKDSFDF
ASDQQPSACISSFSALDGYPFDLLHSDFPDMFLT*

BS01102.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
tx-PB 384 CG5441-PB 1..384 1..384 1931 100 Plus
tx-PA 384 CG5441-PA 1..384 1..384 1931 100 Plus
cato-PA 189 CG7760-PA 56..165 63..163 152 37.6 Plus