Clone Sequence Records
BS01106.3prime Sequence
869 bp (851 high quality bases) assembled on 2005-11-30
> BS01106.3prime
ATGGTCTAGAAAGCTTCGTCAGTCCAGCCACCTGGTTTGCGTGCAAGTCG
ACTGAAAGTTGTCGGGGAAGAGTTCGTCCATTATTTCATCGCAGGTCTGC
GTGTGCTGCGTGTTGTACAGACCATCTGGCCAGTGAGTTTGGGTTTGGAT
GTGGGACAGCCCCAGTTCCTCAAACAAATCGTCGCAAGTTTGGGTGTACA
TGTGGGCAGAGGTTTGCAAGTCAAACATAGGTTCAGTTTCTGAATACGCG
TGGAAATGGCTTCCGACCGCAACAGGCTCCTGTTCCTCTGGGAAATCATC
GGTCATCGTTCCTATGTCGCCTCTGGTGTCGGGCGTTTGGGTTTCTATAT
CGCGTAACAAGGGCGCCAGCACTTCGTTCCTGATTTCATTCAGATCGTCC
TCCTCCGTTTGTGTTTCCATATCTAGTTTCTGGGATGACATCTCTAGCGC
ATAGGACACATCCATAATGGGCAGGAAACAAAGAATATGTTCCTCTGCAG
CCGGTAAATTGGTATCCAGTTCAAGAGTGGAGGGCATATTGGCCTCCGGA
TTGGGTATTTCAGCATATAGTTCAGTAACCCCCGCCAAGTTGGAAGGCAG
GTTGTTAATATATTCCTCTGACGGATGTAAATCACTGCCTGTTTTCAAAC
TGTGGGCGGTTAAGGAATCTGCAGAAACGGGAATTGGCTGTGGATTCAGC
CTTTTCCATGTGGCCAGCGAGGGTATGGGAACCTTGTCGGATTCGTGATG
CACCAAATGGTTCTTGCGCCGCATGTGGGTCCTGAGGCCAGCCTTGCTGT
TGTAGGTCAGTTCACACACTGGACACTTGTGTTTTGAGCACTGATGCTTC
TCCAGATGGTGCTGCAGCA
BS01106.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14962-PA | 1167 | CG14962-RA | 317..1167 | 869..19 | 4205 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:31:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 1029..1879 | 869..19 | 4225 | 99.8 | Minus |
| Asciz-RA | 1303 | CG14962-RA | 330..1180 | 869..19 | 4225 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:30:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3163909..3164759 | 19..869 | 4225 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-01-30 16:31:03 has no hits.
BS01106.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:00:54 Download gff for
BS01106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 318..1167 | 19..868 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:07:51 Download gff for
BS01106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 318..1167 | 19..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:26:27 Download gff for
BS01106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 331..1183 | 14..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:52:23 Download gff for
BS01106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 331..1183 | 14..868 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:52:23 Download gff for
BS01106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3163906..3164758 | 14..868 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:26:27 Download gff for
BS01106.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3163906..3164758 | 14..868 | 99 | | Plus |
BS01106.5prime Sequence
862 bp (769 high quality bases) assembled on 2005-11-30
> BS01106.5prime
GAAGTTATCAGTCGACATGCACAGCGAAAAACACACGCCGGATATTCGGG
AATTAATGCCCGTTAGGGAGCACAGGTGCGAGAGATGTCCGAGTCTTGTC
TTTGGCAACCTCAGTCACTATCAGCTGCACCTGCGACGGCGCCACCAGGA
GGTTATCCCACCCTCTGTGATCGGGCCAATTGTCGCATTCCATTGCCCCG
TGGAAAAGTGCATCTACCATGTGGCTACCAAGGGAGCCCGCAGCTTCACC
AGCTTGCGCTTGCTGCGACAGCACTACCAGAAGAGCCACCTGGACAAGAA
CTACAAGTGCCTGGCGTGCGGCGGGAAATTCCTGCTGCAGCACCATCTGG
AGAAGCATCAGTGCTCAAAACACAAGTGTCCAGTGTGTGAACTGACCTAC
AACAGCAAGGCTGGCCTCAGGACCCACATGCGGCGCAAGAACCATTTGGT
GCATCACGAATCCGACAAGGTTCCCATACCCTCGCTGGCCACATGGAAAA
GGCTGAATCCACAGCCAATTCCCGTTTCTGCAGATTCCTTAACCGCCCAC
AGTTTGAAAACAGGCAGTGATTTACATCCGTCAGAGGAATATATTAACAA
CCTGCCTTCCAACTTGGCGGGGGTTACTGAACTATATGCTGAAATACCCA
ATCCGGAGGCCAATATGCCCTCCACTCTTGAACTGGATACCAATTTACCG
GCTGCAGAGGAACATATTCTTTGTTTCCTGCCCATTATGGATGTGTCCTA
TGCGCTAGAGATGTCATCCCAGAAACTAGATATGGAAACACAAACGGAGG
AGGACGATCTGAATGAAATCAGGAACGAAGTGCTGGCGCCCTTTGTACGC
GATATAGAAACC
BS01106.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14962-PA | 1167 | CG14962-RA | 1..846 | 17..862 | 4180 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 708..1558 | 12..862 | 4210 | 99.6 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 9..859 | 12..862 | 4210 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:31:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3164230..3165080 | 862..12 | 4210 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:31:41 has no hits.
BS01106.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:00:55 Download gff for
BS01106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 1..846 | 17..862 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:07:53 Download gff for
BS01106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 1..846 | 17..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:49:43 Download gff for
BS01106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 1..859 | 2..862 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:13:03 Download gff for
BS01106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 1..859 | 2..862 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:13:03 Download gff for
BS01106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3164230..3165089 | 1..862 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:49:43 Download gff for
BS01106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3164230..3165089 | 1..862 | 99 | | Minus |
BS01106.complete Sequence
1201 bp (1201 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634529
> BS01106.complete
GAAGTTATCAGTCGACATGCACAGCGAAAAACACACGCCGGATATTCGGG
AATTAATGCCCGTTAGGGAGCACAGGTGCGAGAGATGTCCGAGTCTTGTC
TTTGGCAACCTCAGTCACTATCAGCTGCACCTGCGACGGCGCCACCAGGA
GGTTATCCCACCCTCTGTGATCGGGCCAATTGTCGCATTCCATTGCCCCG
TGGAAAAGTGCATCTACCATGTGGCTACCAAGGGAGCCCGCAGCTTCACC
AGCTTGCGCTTGCTGCGACAGCACTACCAGAAGAGCCACCTGGACAAGAA
CTACAAGTGCCTGGCGTGCGGCGGGAAATTCCTGCTGCAGCACCATCTGG
AGAAGCATCAGTGCTCAAAACACAAGTGTCCAGTGTGTGAACTGACCTAC
AACAGCAAGGCTGGCCTCAGGACCCACATGCGGCGCAAGAACCATTTGGT
GCATCACGAATCCGACAAGGTTCCCATACCCTCGCTGGCCACATGGAAAA
GGCTGAATCCACAGCCAATTCCCGTTTCTGCAGATTCCTTAACCGCCCAC
AGTTTGAAAACAGGCAGTGATTTACATCCGTCAGAGGAATATATTAACAA
CCTGCCTTCCAACTTGGCGGGGGTTACTGAACTATATGCTGAAATACCCA
ATCCGGAGGCCAATATGCCCTCCACTCTTGAACTGGATACCAATTTACCG
GCTGCAGAGGAACATATTCTTTGTTTCCTGCCCATTATGGATGTGTCCTA
TGCGCTAGAGATGTCATCCCAGAAACTAGATATGGAAACACAAACGGAGG
AGGACGATCTGAATGAAATCAGGAACGAAGTGCTGGCGCCCTTGTTACGC
GATATAGAAACCCAAACGCCCGACACCAGAGGCGACATAGGAACGATGAC
CGATGATTTCCCAGAGGAACAGGAGCCTGTTGCGGTCGGAAGCCATTTCC
ACGCGTATTCAGAAACTGAACCTATGTTTGACTTGCAAACCTCTGCCCAC
ATGTACACCCAAACTTGCGACGATTTGTTTGAGGAACTGGGGCTGTCCCA
CATCCAAACCCAAACTCACTGGCCAGATGGTCTGTACAACACGCAGCACA
CGCAGACCTGCGATGAAATAATGGACGAACTCTTCCCCGACAACTTTCAG
TCGACTTGCACGCAAACCAGGTGGCTGGACTGACGAAGCTTTCTAGACCA
T
BS01106.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 1167 | CG14962-PB | 1..1167 | 17..1183 | 5805 | 99.8 | Plus |
| Asciz-RA | 1167 | CG14962-PA | 1..1167 | 17..1183 | 5805 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:39:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 708..1879 | 12..1183 | 5815 | 99.7 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 9..1180 | 12..1183 | 5815 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:39:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3163909..3165080 | 1183..12 | 5815 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:39:31 has no hits.
BS01106.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:13 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 1..1167 | 17..1183 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:25 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 699..1882 | 1..1188 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:56:48 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 14..1180 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:13 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 699..1882 | 1..1188 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:16 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 14..1180 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:16 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3163906..3165075 | 17..1185 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:56:48 Download gff for
BS01106.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3163906..3165075 | 17..1185 | 99 | | Minus |
BS01106.pep Sequence
Translation from 16 to 1182
> BS01106.pep
MHSEKHTPDIRELMPVREHRCERCPSLVFGNLSHYQLHLRRRHQEVIPPS
VIGPIVAFHCPVEKCIYHVATKGARSFTSLRLLRQHYQKSHLDKNYKCLA
CGGKFLLQHHLEKHQCSKHKCPVCELTYNSKAGLRTHMRRKNHLVHHESD
KVPIPSLATWKRLNPQPIPVSADSLTAHSLKTGSDLHPSEEYINNLPSNL
AGVTELYAEIPNPEANMPSTLELDTNLPAAEEHILCFLPIMDVSYALEMS
SQKLDMETQTEEDDLNEIRNEVLAPLLRDIETQTPDTRGDIGTMTDDFPE
EQEPVAVGSHFHAYSETEPMFDLQTSAHMYTQTCDDLFEELGLSHIQTQT
HWPDGLYNTQHTQTCDEIMDELFPDNFQSTCTQTRWLD*
BS01106.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-PB | 388 | CG14962-PB | 1..388 | 1..388 | 2111 | 100 | Plus |
| Asciz-PA | 388 | CG14962-PA | 1..388 | 1..388 | 2111 | 100 | Plus |
