Clone BS01114 Report

Search the DGRC for BS01114

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:11
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG9609-RA
Protein status:BS01114.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01114.3prime Sequence

935 bp (850 high quality bases) assembled on 2005-11-30

> BS01114.3prime
ATGGTCTAGAAAGCTTCGCTACTCCTGCTCCTTTTCCTCTTCATCCTGCA
GGGTCTGTGCCAGCAGCTCCTCGACGGGGTCATCCTTCAGCGACTGGGTG
ATCTTTTCGAGGACCAAAGGCTGTCGCTCGCGCACCGCCTCATCATCTTC
CTTGTCCAATTGCAGGCAGGCCAGTTTGGATAGCCTCGAATGTTTGCTGC
GTCCAGCATCGCGTCGTCGCTTGCGGGATGTGGACTTAGTTTTGCCCCCT
TCTCCAGTCTTACTCTTGTCCTTCTTCTTGGCTTTCAATTCCTTTTTCGT
CGCACCATCTTTGTGATCCCTGAGCAGATGTCTCGCCAGATTCTGCGCAC
TGCTGAAACAGCGGCCGCAGTCCAAGGCCTGGCACTCGAAACGCCTGCCC
GAGTGGGCGGTGAGCATGTGCTGGCGTAGATTCCTGAGGTACGAGTAACT
CTTGCCGCATCCCTCCTCGTTGCAGGTGAAGGAGGTGGCGCACTCATCCG
TCTGCGCCGCCTCCTTGTGCTTCACCTCGAGGTGACGCTTCAGTTCGCTC
GGCTTGTCGAAGGCACTATCGCAGCGGTCGCACTTATGGCGATTCTTGCC
GTGCAACGAGTCGCGACAATGCTTCGTATACAACGTCCATTTGTCGAACT
GCAGCGGGCAGCCGGGACACTCGTACAGCTTGCAGCTGGGCTCGTGACTC
TGGCACTGCCACTGCTGGTAGAAGCCGCGCGAGCACTTCGAGCAGCTGTA
CGGATACTCCAGCGTGTGCTCCCTGATCTCGTGGCGCTTCAGCTTGAGCT
TTTGCGAGAATTTGGCACTGCACTGGCTGCACGGATAGACCTTTGGGCTC
TCGTGGGTTTCGCGCATGTGGCGGGTCATGTTGCTAACCGAGATGAACAT
CTTGCTGCACTCCTCCAGCGCGCACTTCACCGTCT

BS01114.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-PA 1212 CG9609-RA 296..1212 935..19 4585 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:29:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-RA 1834 CG9609-RA 554..1470 935..19 4585 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16785479..16786395 19..935 4585 100 Plus
Blast to na_te.dros performed on 2015-02-11 11:29:28 has no hits.

BS01114.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:01:09 Download gff for BS01114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-PA 296..1212 19..935 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:08:12 Download gff for BS01114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-PA 296..1212 19..935 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:14:27 Download gff for BS01114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 554..1470 19..935 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:51:28 Download gff for BS01114.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 554..1470 19..935 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:51:28 Download gff for BS01114.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16785479..16786395 19..935 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:14:27 Download gff for BS01114.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16679512..16680428 19..935 100   Plus

BS01114.5prime Sequence

790 bp (742 high quality bases) assembled on 2005-11-30

> BS01114.5prime
GAAGTTATCAGTCGACATGCCGCCTGGAACGCAAATTGCCAGCGACAGCG
ATATGGAGACCGCTCTGGAGGAGTTCAAGCAGCGCCAGGGACGCCGCAAC
AGCATCGGCTCGGCCAAGTACGCGTGCAGCATGCCCAAATGCGAGGCCAC
ATTCAAGCGGCTGGACCAATTGGATCGCCATGAGTATCATCACACAGGGA
TTAAGAAGCACGCCTGCTCGTACGAGGGTTGCGACAAGACGTACTCGATT
GTGACGCACTTAAAGAGGCATCTGCGCAGCACCCACGAGCGTCCGGAGTC
GGCGGCCAAGAAGACGGTGAAGTGCGCGCTGGAGGAGTGCAGCAAGATGT
TCATCTCGGTTAGCAACATGACCCGCCACATGCGCGAAACCCACGAGAGC
CCAAAGGTCTATCCGTGCAGCCAGTGCAGTGCCAAATTCTCGCAAAAGCT
CAAGCTGAAGCGCCACGAGATCAGGGAGCACACGCTGGAGTATCCGTACA
GCTGCTCGAAGTGCTCGCGCGGCTTCTACCAGCAGTGGCAGTGCCAGAGT
CACGAGCCCAGCTGCAAGCTGTACGAGTGTCCCGGCTGCCCGCTGCAGTT
CGACAAATGGACGTTGTATACGAAGCATTGTCGCGACTCGTTGCACGGCA
AGAATCGCCATAAGTGCGACCGCTGCGATAGTGCCTTCGACAAGCCGAGC
GAACTGAAGCGTCACCTCGAGGTGAAGCACAAGGAGGCGGCGCAGACGGA
TGAGTGCGCCACCTCCTTCACCCTGCACGAGGAGGGATGC

BS01114.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-PA 1212 CG9609-RA 1..756 17..772 3780 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-RA 1834 CG9609-RA 259..1032 17..790 3825 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16785917..16786504 790..203 2880 99.3 Minus
X 23542271 X 16786565..16786750 202..17 930 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:24:12 has no hits.

BS01114.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:01:10 Download gff for BS01114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-PA 1..774 17..790 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:08:13 Download gff for BS01114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-PA 1..774 17..790 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:24:14 Download gff for BS01114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 259..1032 17..790 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:22:20 Download gff for BS01114.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 259..1032 17..790 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:22:20 Download gff for BS01114.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16786565..16786750 17..202 100   Minus
X 16785917..16786504 203..790 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:24:14 Download gff for BS01114.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16679950..16680537 203..790 99 <- Minus
arm_X 16680598..16680783 17..202 100   Minus

BS01114.complete Sequence

1246 bp (1246 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634533

> BS01114.complete
GAAGTTATCAGTCGACATGCCGCCTGGAACGCAAATTGCCAGCGACAGCG
ATATGGAGACCGCTCTGGAGGAGTTCAAGCAGCGCCAGGGACGCCGCAAC
AGCATCGGCTCGGCCAAGTACGCGTGCAGCATGCCCAAATGCGAGGCCAC
ATTCAAGCGGCTGGACCAATTGGATCGCCATGAGTATCATCACACAGGGA
TTAAGAAGCACGCCTGCTCGTACGAGGGTTGCGACAAGACGTACTCGATT
GTGACGCACTTAAAGAGGCATCTGCGCAGCACCCACGAGCGTCCGGAGTC
GGCGGCCAAGAAGACGGTGAAGTGCGCGCTGGAGGAGTGCAGCAAGATGT
TCATCTCGGTTAGCAACATGACCCGCCACATGCGCGAAACCCACGAGAGC
CCAAAGGTCTATCCGTGCAGCCAGTGCAGTGCCAAATTCTCGCAAAAGCT
CAAGCTGAAGCGCCACGAGATCAGGGAGCACACGCTGGAGTATCCGTACA
GCTGCTCGAAGTGCTCGCGCGGCTTCTACCAGCAGTGGCAGTGCCAGAGT
CACGAGCCCAGCTGCAAGCTGTACGAGTGTCCCGGCTGCCCGCTGCAGTT
CGACAAATGGACGTTGTATACGAAGCATTGTCGCGACTCGTTGCACGGCA
AGAATCGCCATAAGTGCGACCGCTGCGATAGTGCCTTCGACAAGCCGAGC
GAACTGAAGCGTCACCTCGAGGTGAAGCACAAGGAGGCGGCGCAGACGGA
TGAGTGCGCCACCTCCTTCACCTGCAACGAGGAGGGATGCGGCAAGAGTT
ACTCGTACCTCAGGAATCTACGCCAGCACATGCTCACCGCCCACTCGGGC
AGGCGTTTCGAGTGCCAGGCCTTGGACTGCGGCCGCTGTTTCAGCAGTGC
GCAGAATCTGGCGAGACATCTGCTCAGGGATCACAAAGATGGTGCGACGA
AAAAGGAATTGAAAGCCAAGAAGAAGGACAAGAGTAAGACTGGAGAAGGG
GGCAAAACTAAGTCCACATCCCGCAAGCGACGACGCGATGCTGGACGCAG
CAAACATTCGAGGCTATCCAAACTGGCCTGCCTGCAATTGGACAAGGAAG
ATGATGAGGCGGTGCGCGAGCGACAGCCTTTGGTCCTCGAAAAGATCACC
CAGTCGCTGAAGGATGACCCCGTCGAGGAGCTGCTGGCACAGACCCTGCA
GGATGAAGAGGAAAAGGAGCAGGAGTAGCGAAGCTTTCTAGACCAT

BS01114.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-RA 1212 CG9609-PA 1..1212 17..1228 6060 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-RA 1834 CG9609-RA 259..1470 17..1228 6060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:26:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16785479..16786504 1228..203 5130 100 Minus
X 23542271 X 16786565..16786750 202..17 930 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:26:18 has no hits.

BS01114.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:36:03 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 1..1212 17..1228 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:21:13 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 229..1440 17..1228 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:00:56 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 259..1472 17..1230 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:36:03 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 229..1440 17..1228 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:05 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
CG9609-RA 259..1472 17..1230 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:05 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
X 16786565..16786750 17..202 100   Minus
X 16785477..16786504 203..1230 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:00:56 Download gff for BS01114.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16679510..16680537 203..1230 99 <- Minus
arm_X 16680598..16680783 17..202 100   Minus

BS01114.pep Sequence

Translation from 16 to 1227

> BS01114.pep
MPPGTQIASDSDMETALEEFKQRQGRRNSIGSAKYACSMPKCEATFKRLD
QLDRHEYHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTHERPESAAKKT
VKCALEECSKMFISVSNMTRHMRETHESPKVYPCSQCSAKFSQKLKLKRH
EIREHTLEYPYSCSKCSRGFYQQWQCQSHEPSCKLYECPGCPLQFDKWTL
YTKHCRDSLHGKNRHKCDRCDSAFDKPSELKRHLEVKHKEAAQTDECATS
FTCNEEGCGKSYSYLRNLRQHMLTAHSGRRFECQALDCGRCFSSAQNLAR
HLLRDHKDGATKKELKAKKKDKSKTGEGGKTKSTSRKRRRDAGRSKHSRL
SKLACLQLDKEDDEAVRERQPLVLEKITQSLKDDPVEELLAQTLQDEEEK
EQE*

BS01114.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG9609-PA 403 CG9609-PA 1..403 1..403 2185 100 Plus
CG32772-PE 520 CG32772-PE 132..403 38..327 279 27.4 Plus
CG32772-PC 520 CG32772-PC 132..403 38..327 279 27.4 Plus
crol-PG 878 CG14938-PG 293..583 22..309 277 29.2 Plus
CG5245-PA 501 CG5245-PA 49..322 4..306 273 26.5 Plus
CG5245-PA 501 CG5245-PA 198..463 42..302 224 27.4 Plus
CG5245-PA 501 CG5245-PA 331..491 34..234 181 26.9 Plus
CG5245-PA 501 CG5245-PA 356..490 31..179 166 31.5 Plus
CG5245-PA 501 CG5245-PA 367..490 18..150 156 35.5 Plus