Clone Sequence Records
BS01132.3prime Sequence
908 bp (759 high quality bases) assembled on 2005-11-30
> BS01132.3prime
ATGGTCTAGAAAGCTTCGTTAGGTGTACAACTCCTCTCCATCGGGAATGG
CTTCCTCGTACTCGAAGTCCTCAAAATTTGCGTCCTCATCCTGAAGTACC
TCGTGGTCCTCATATTGTTCCTCGTCAATGTTATCTAACATTACGTCCAG
TTCAGCCTGGTTGTCCTCCATTTCTGCCTGCCCCTCTTCCATATATCCCG
GAAACTCCGCCGGATCGACTTCAGACTGGAATTCCTCTTTTGGACCATTA
ACCAGCAAGTTGACCCGCTTGCGGTGATACTTTGTGGAGTAGTGCCGATG
CAAAAACTGCGCCTCCTTGAACTCCTTGTTGCATGTGAGGCAGATATGGA
CATCCGGTTGGTCACTCTTGTGCCCCTCCTCGTGCTTCAGCCGTCCCTTC
TCGCTGTTGAATCGTTTGCCGCATATTTTGCACGGGTGCACCAGCTCGTT
GGCATGCATTTGACGTTCATGACGACAGCGGCTGGGACTATTGGCGAATC
CCATACCGCAGAACTTGCAGACGTACGGTTTCTCGCCCTTGTGATGGACT
CGAATGTGCAATCGGAGCAGTGGCATGGTGTAGAACTTGCGACCGCACTC
GTCGCATGAAAACTTCTCCTCGAAGTGCCGCAGCTTGTGATCCTTCATGT
TGCTGTGATCGTTGAACGACCAACCGCACTGGTCGCACACGTATCGCTTT
ATCGAGCGATCGACCTTGGGTTTTGGTCGCCGCTTTCTGGGCTTTCGGAC
GTGCTCCCGCGGAGGTGGCGGTGGACTATCTGCCTTCTCGACCACAGGCA
CACGAAGCCGCTTGACCCTGACTCGTGGGGACTGTCTGTTTCGGAAATTT
TGGTCCTCGATCCGGAATTTTTTGGNCGGAGGATATCTTAAAATCGGCTT
TTCGTCCT
BS01132.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-PA | 1293 | CG7357-RA | 404..1293 | 908..19 | 4331 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:49:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-RA | 1645 | CG7357-RA | 509..1399 | 908..18 | 4384 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:49:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17808216..17808660 | 464..908 | 2169 | 99.1 | Plus |
3R | 32079331 | 3R | 17807653..17807978 | 18..343 | 1615 | 99.7 | Plus |
3R | 32079331 | 3R | 17808036..17808156 | 344..464 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 18:49:14 has no hits.
BS01132.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:01:44 Download gff for
BS01132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-PA | 404..1293 | 19..908 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:08:54 Download gff for
BS01132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-PA | 404..1293 | 19..908 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:51:34 Download gff for
BS01132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 509..1406 | 13..908 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 21:05:18 Download gff for
BS01132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 509..1406 | 13..908 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 21:05:18 Download gff for
BS01132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17807646..17807978 | 13..343 | 98 | <- | Plus |
3R | 17808036..17808155 | 344..463 | 100 | <- | Plus |
3R | 17808216..17808660 | 464..908 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:51:34 Download gff for
BS01132.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13633758..13633877 | 344..463 | 100 | <- | Plus |
arm_3R | 13633368..13633700 | 13..343 | 98 | <- | Plus |
arm_3R | 13633938..13634382 | 464..908 | 99 | | Plus |
BS01132.5prime Sequence
825 bp (807 high quality bases) assembled on 2005-11-30
> BS01132.5prime
GAAGTTATCAGTCGATATGAGCACCGAGTGTCGGATCTGCGGCGAGCGCA
TCTTCACGCCGCACCCAAAGAACATCTTCGAGAAGCGCAATCATCGCATT
CGGATGGCCATCGAGCAAATCACGGGCTTAGAGATCGTTTTAGAGAATAT
GCTGCCCCAGCACATATGCGCTTGTTGTCTCCTGGACCTGACCCAAGCCG
TAGCCTTCAGGCAGCGATGCCTGGAGACGCACGCAAATCTCCACCAGAGG
ATCTCCTCGAAGGCGGGTGTCGCCTCAAAAGGCTCCCCGGAGGTTTCGCC
AGTGCTTAGTGATCCGCTGCTGAAACGGGAGGTGCTGGATGATACAGTAG
ACACCGAGGACGATAAGGAGCTACTGGACGATGATAAGGATTTAATGGAT
GATGATAAGGATTTCTTGGAGGACGAAAAGCCGATTTTAAGATATCCTCC
GGCCAAAAAAATCCGGATCGAGGACCAAAATTTCCCGAACAGACAGTCCC
CACGAGTCAGGGTCAAGCGGCTTCGTGTGCCTGTGGTCGAGAAGGCAGAT
AGTCCACCGCCACCTCCGCGGGAGCACGTCCGAAAGCCCAGAAAGCGGCG
ACCAAAACCCAAGGTCGATCGCTCGATAAAGCGATACGTGTGCGACCAGT
GCGGTTGGTCGTTCAACGATCACAGCAACATGAAGGATCACAAGCTGCGG
CACTTCGAGGAGAAGTTTTCATGCGACGAGTGCGGTCGCAAGTTCTACAC
CATGCCACTGCTCCGATTGCACATTCGAGTCCATCACAAGGGCGAGAAAC
CGTACGTCTGGCAGTTCTGCGGTAT
BS01132.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:45:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-PA | 1293 | CG7357-RA | 1..809 | 17..825 | 3995 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-RA | 1645 | CG7357-RA | 106..914 | 17..825 | 4015 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 01:48:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17808255..17808948 | 825..132 | 3440 | 99.7 | Minus |
3R | 32079331 | 3R | 17809001..17809117 | 133..17 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 01:48:09 has no hits.
BS01132.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:01:45 Download gff for
BS01132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-PA | 1..809 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:08:55 Download gff for
BS01132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-PA | 1..809 | 17..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:07:16 Download gff for
BS01132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 104..914 | 14..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:51:33 Download gff for
BS01132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 104..914 | 14..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:51:33 Download gff for
BS01132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17808255..17808946 | 134..825 | 99 | <- | Minus |
3R | 17809001..17809119 | 14..133 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:07:16 Download gff for
BS01132.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13633977..13634668 | 134..825 | 99 | <- | Minus |
arm_3R | 13634723..13634841 | 14..133 | 99 | | Minus |
BS01132.complete Sequence
1327 bp assembled on 2009-02-12
> BS01132.complete
GAAGTTATCAGTCGATATGAGCACCGAGTGTCGGATCTGCGGCGAGCGCA
TCTTCACGCCGCACCCAAAGAACATCTTCGAGAAGCGCAATCATCGCATT
CGGATGGCCATCGAGCAAATCACGGGCTTAGAGATCGTTTTAGAGAATAT
GCTGCCCCAGCACATATGCGCTTGTTGTCTCCTGGACCTGACCCAAGCCG
TAGCCTTCAGGCAGCGATGCCTGGAGACGCACGCAAATCTCCACCAGAGG
ATCTCCTCGAAGGCGGGTGTCGCCTCAAAAGGCTCCCCGGAGGTTTCGCC
AGTGCTTAGTGATCCGCTGCTGAAACGGGAGGTGCTGGATGATACAGTAG
ACACCGAGGACGATAAGGAGCTACTGGACGATGATAAGGATTTAATGGAT
GATGATAAGGATTTCTTGGAGGACGAAAAGCCGATTTTAAGATATCCTCC
GGCCAAAAAAATCCGGATCGAGGACCAAAATTTCCCGAACAGACAGTCCC
CACGAGTCAGGGTCAAGCGGCTTCGTGTGCCTGTGGTCGAGAAGGCAGAT
AGTCCACCGCCACCTCCGCGGGAGCACGTCCGAAAGCCCAGAAAGCGGCG
ACCAAAACCCAAGGTCGATCGCTCGATAAAGCGATACGTGTGCGACCAGT
GCGGTTGGTCGTTCAACGATCACAGCAACATGAAGGATCACAAGCTGCGG
CACTTCGAGGAGAAGTTTTCATGCGACGAGTGCGGTCGCAAGTTCTACAC
CATGCCACTGCTCCGATTGCACATTCGAGTCCATCACAAGGGCGAGAAAC
CGTACGTCTGCAAGTTCTGCGGTATGGGATTCGCCAATAGTCCCAGCCGC
TGTCGTCATGAACGTCAAATGCATGCCAACGAGCTGGTGCACCCGTGCAA
AATATGCGGCAAACGATTCAACAGCGAGAAGGGACGGCTGAAGCACGAGG
AGGGGCACAAGAGTGACCAACCGGATGTCCATATCTGCCTCACATGCAAC
AAGGAGTTCAAGGAGGCGCAGTTTTTGCATCGGCACTACTCCACAAAGTA
TCACCGCAAGCGGGTCAACTTGCTGGTTAATGGTCCAAAAGAGGAATTCC
AGTCTGAAGTCGATCCGGCGGAGTTTCCGGGATATATGGAAGAGGGGCAG
GCAGAAATGGAGGACAACCAGGCTGAACTGGACGTAATGTTAGATAACAT
TGACGAGGAACAATATGAGGACCACGAGGTACTTCAGGATGAGGACGCAA
ATTTTGAGGACTTCGAGTACGAGGAAGCCATTCCCGATGGAGAGGAGTTG
TACACCTAACGAAGCTTTCTAGACCAT
BS01132.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-RA | 1293 | CG7357-PA | 1..1293 | 17..1309 | 6450 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-RA | 1645 | CG7357-RA | 106..1399 | 17..1310 | 6455 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:44:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17808216..17808948 | 864..132 | 3665 | 100 | Minus |
3R | 32079331 | 3R | 17807653..17807978 | 1310..985 | 1615 | 99.7 | Minus |
3R | 32079331 | 3R | 17808036..17808156 | 984..864 | 605 | 100 | Minus |
3R | 32079331 | 3R | 17809001..17809117 | 133..17 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:44:26 has no hits.
BS01132.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:17 Download gff for
BS01132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 108..1401 | 17..1311 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:35 Download gff for
BS01132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 106..1399 | 17..1311 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:50 Download gff for
BS01132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7357-RA | 106..1399 | 17..1311 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:50 Download gff for
BS01132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17808036..17808155 | 865..984 | 100 | <- | Minus |
3R | 17807652..17807978 | 985..1311 | 99 | <- | Minus |
3R | 17808216..17808946 | 134..864 | 100 | <- | Minus |
3R | 17809001..17809117 | 17..133 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:35 Download gff for
BS01132.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13633374..13633700 | 985..1311 | 99 | <- | Minus |
arm_3R | 13633758..13633877 | 865..984 | 100 | <- | Minus |
arm_3R | 13633938..13634668 | 134..864 | 100 | <- | Minus |
arm_3R | 13634723..13634839 | 17..133 | 100 | | Minus |
BS01132.pep Sequence
Translation from 16 to 1308
> BS01132.pep
MSTECRICGERIFTPHPKNIFEKRNHRIRMAIEQITGLEIVLENMLPQHI
CACCLLDLTQAVAFRQRCLETHANLHQRISSKAGVASKGSPEVSPVLSDP
LLKREVLDDTVDTEDDKELLDDDKDLMDDDKDFLEDEKPILRYPPAKKIR
IEDQNFPNRQSPRVRVKRLRVPVVEKADSPPPPPREHVRKPRKRRPKPKV
DRSIKRYVCDQCGWSFNDHSNMKDHKLRHFEEKFSCDECGRKFYTMPLLR
LHIRVHHKGEKPYVCKFCGMGFANSPSRCRHERQMHANELVHPCKICGKR
FNSEKGRLKHEEGHKSDQPDVHICLTCNKEFKEAQFLHRHYSTKYHRKRV
NLLVNGPKEEFQSEVDPAEFPGYMEEGQAEMEDNQAELDVMLDNIDEEQY
EDHEVLQDEDANFEDFEYEEAIPDGEELYT*
BS01132.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7357-PA | 430 | CG7357-PA | 1..430 | 1..430 | 2344 | 100 | Plus |
CG18764-PA | 409 | CG18764-PA | 1..402 | 1..353 | 362 | 27.1 | Plus |
CG31441-PA | 341 | CG31441-PA | 8..334 | 5..349 | 347 | 29.9 | Plus |
CG1792-PA | 372 | CG1792-PA | 6..333 | 5..346 | 340 | 30.5 | Plus |
CG17801-PB | 381 | CG17801-PB | 8..376 | 3..354 | 331 | 26.4 | Plus |