Clone BS01148 Report

Search the DGRC for BS01148

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:11
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG14710-RB
Protein status:BS01148.pep: gold
Sequenced Size:16

Clone Sequence Records

BS01148.3prime Sequence

894 bp (779 high quality bases) assembled on 2005-11-30

> BS01148.3prime
ATGGTCTAGAAAGCTTCGTTAGCTCTCTAACATTTCCGGAGAGCTGGGAA
TGGTTTGCTCCATTTTGTTGCGGTGGGTTAGCGTTTGCAGGTGAGCTTTC
AGCTGGTGCAGCAGAGTGAATGACTTGCAACAGATACCACAGTTGTAATT
CTTTTGGGCGGAGTGCGAAAGGATGTGATTTTTGAGGATGGCTGTGTGCG
TAAAAGTTTTCCCGCACTCCTGGCAGGCATAAGGACGCGTGTTGGTGTGG
ACCCGTTCATGGCGGACCCGTTCGCTGCGATCGTAGAAGTGGCGGTCGCA
GTACATACACTTGTATGGACGGTCGCCCGTATGACGACGGATGTGTGCTC
GCAATTCGCCCATTTGTCGAAAAGATTTATTGCATATTTCGCATTGGTGG
GGCTTGTACTCTGAATGGGTCATCATGTGGGCCGTGAAAACAGATTTCTT
GTAAAAGACGTTTCCGCACAGGATGCACATGAACTTCTCCTCTTCCTTGC
ACTTTGGCTGGTTCCCCCTTTCCTTGGCGTTGATATCCTTGCGTTTGAAT
TTCAGTTCGGCGTCCGGTTTGCGAGGCCTTCCCGGCTTTTGTTTGTCCAT
TTTGAAGCTGGGATGTGGCGAAGGAGCGCTTGACATGAGAAGTTCCTCGT
CCCCGTACTCAACCTCATAAAACGTGTTTGCATTGGATAATTCCTCGACA
AGCTCACCCTTATCATCAATGAGTTCTTCCATTTGTTGATCATCAACGTA
GGAGTCCATGTGGGAAATCAGAATCTGCTCAGGACTTTCCGTATTANGCT
CTTCGTCCTCCTCAATCGATTCGTTTATGATAAATCCGTTAAAATCGAGA
ACTTCCTGGGACTGATCCTCCTGCTGTTCATCCCCCTCCTCTAT

BS01148.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-PA 1344 CG14710-RA 469..1344 894..19 4361 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-RB 1458 CG14710-RB 493..1368 894..19 4369 99.9 Minus
CG6808-RB 1447 CG6808-RB 1275..1398 19..142 620 100 Plus
CG6808-RA 3138 CG6808-RA 2966..3089 19..142 620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:29:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11620640..11621145 894..389 2519 99.8 Minus
3R 32079331 3R 11621208..11621453 388..143 1230 100 Minus
3R 32079331 3R 11621515..11621638 142..19 620 100 Minus
Blast to na_te.dros performed on 2015-01-30 16:29:49 has no hits.

BS01148.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:08 Download gff for BS01148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-PA 469..1344 19..894 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:28 Download gff for BS01148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-PA 469..1344 19..894 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:26:13 Download gff for BS01148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 493..1368 19..894 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:52:12 Download gff for BS01148.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 493..1368 19..894 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:52:12 Download gff for BS01148.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11620640..11621145 389..894 99 -> Minus
3R 11621208..11621453 143..388 100 -> Minus
3R 11621515..11621638 19..142 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:26:13 Download gff for BS01148.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7446362..7446867 389..894 99 -> Minus
arm_3R 7446930..7447175 143..388 100 -> Minus
arm_3R 7447237..7447360 19..142 100   Minus

BS01148.5prime Sequence

797 bp (796 high quality bases) assembled on 2005-11-30

> BS01148.5prime
GAAGTTATCAGTCGACATGCGGTCACACAGCGCAGGTCTAAAATTGTTTA
AAACTCATTTAATTGAAATTAGCCTTAATTTCCAGCCCCCTTGCAAAAAA
ACGCTAGCCAGGATGGCCAGCTTGCCAGTGATTCTGCAATGCAGGATCTG
CTTGGGCGATTTCGAAGAGAGCCAAATGATCTGCCTGTTTGGGGATAAAG
GCGAAAGTGACCTCAGGAAAAAGTTGGAGCTGTGCTGTAGGATTAGGGTT
CGCCAATCCCCGCAGCTGCCCGAGAAGGCCTGCAACAGCTGTTGCGAATT
CGTCCAAATGTGGTTCAACTTTCGCCAGATGTGCCTGAACTCGCAGGTCT
ACTGGGAAACAAGTTCCTCGGAGAGACCAGAGGCTCTTGCCCAGGCAAGC
GATGCCGAGTATATGTTGTATCTGTACGAGAACCTACATCTGAAACTAGG
CACAGAGAATCAGGAGAAGGAAGAGATCACCGCAATAGAGGAGGGGGATG
AACAGCAGGAGGATCAGTCCCAGGAAGTTCTCGATTTTAACGGATTTATC
ATAAACGAATCGATTGAGGAGGACGAAGAGCCTAATACGGAAAGTCCTGA
GCAGATTCTGATTTCCCACATGGACTCCTACGTTGATGATCAACAAATGG
AAGAACTCATTGATGATAAGGGTGAGCTTGTCGAGGAATTATCCAATGCA
AACACGTTTTATGAGGTTGAGTACGGGGACGAGGAACTTCTCATGTCAAG
CGCTCCTTCGCCACATCCCAGCTTCAAAATGGACAAACAAAAGCCGG

BS01148.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-PA 1344 CG14710-RA 1..781 17..797 3905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-RB 1458 CG14710-RB 25..805 17..797 3905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11620402..11620952 247..797 2755 100 Plus
3R 32079331 3R 11620114..11620346 17..249 1165 100 Plus
Blast to na_te.dros performed on 2015-02-04 04:10:45 has no hits.

BS01148.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:09 Download gff for BS01148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-PA 1..781 17..797 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:29 Download gff for BS01148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-PA 1..781 17..797 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:08:15 Download gff for BS01148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 16..805 8..797 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:49:50 Download gff for BS01148.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 16..805 8..797 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:49:50 Download gff for BS01148.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11620105..11620344 8..247 98 -> Plus
3R 11620403..11620952 248..797 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:08:15 Download gff for BS01148.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7445827..7446066 8..247 98 -> Plus
arm_3R 7446125..7446674 248..797 100   Plus

BS01148.complete Sequence

1378 bp (1378 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ638762

> BS01148.complete
GAAGTTATCAGTCGACATGCGGTCACACAGCGCAGGTCTAAAATTGTTTA
AAACTCATTTAATTGAAATTAGCCTTAATTTCCAGCCCCCTTGCAAAAAA
ACGCTAGCCAGGATGGCCAGCTTGCCAGTGATTCTGCAATGCAGGATCTG
CTTGGGCGATTTCGAAGAGAGCCAAATGATCTGCCTGTTTGGGGATAAAG
GCGAAAGTGACCTCAGGAAAAAGTTGGAGCTGTGCTGTAGGATTAGGGTT
CGCCAATCCCCGCAGCTGCCCGAGAAGGCCTGCAACAGCTGTTGCGAATT
CGTCCAAATGTGGTTCAACTTTCGCCAGATGTGCCTGAACTCGCAGGTCT
ACTGGGAAACAAGTTCCTCGGAGAGACCAGAGGCTCTTGCCCAGGCAAGC
GATGCCGAGTATATGTTGTATCTGTACGAGAACCTACATCTGAAACTAGG
CACAGAGAATCAGGAGAAGGAAGAGATCACCGCAATAGAGGAGGGGGATG
AACAGCAGGAGGATCAGTCCCAGGAAGTTCTCGATTTTAACGGATTTATC
ATAAACGAATCGATTGAGGAGGACGAAGAGCCTAATACGGAAAGTCCTGA
GCAGATTCTGATTTCCCACATGGACTCCTACGTTGATGATCAACAAATGG
AAGAACTCATTGATGATAAGGGTGAGCTTGTCGAGGAATTATCCAATGCA
AACACGTTTTATGAGGTTGAGTACGGGGACGAGGAACTTCTCATGTCAAG
CGCTCCTTCGCCACATCCCAGCTTCAAAATGGACAAACAAAAGCCGGGAA
GGCCTCGCAAACCGGACGCCGAACTGAAATTCAAACGCAAGGATATCAAC
GCCAAGGAAAGGGGGAACCAGCCAAAGTGCAAGGAAGAGGAGAAGTTCAT
GTGCATCCTGTGCGGAAACGTCTTTTACAAGAAATCTGTTTTCACGGCCC
ACATGATGACCCATTCAGAGTACAAGCCCCACCAATGCGAAATATGCAAT
AAATCTTTTCGACAAATGGGCGAATTGCGAGCACACATCCGTCGTCATAC
GGGCGACCGTCCATACAAGTGTATGTACTGCGACCGCCACTTCTACGATC
GCAGCGAACGGGTCCGCCATGAACGGGTCCACACCAACACGCGTCCTTAT
GCCTGCCAGGAGTGCGGGAAAACTTTTACGCACACAGCCATCCTCAAAAA
TCACATCCTTTCGCACTCCGCCCAAAAGAATTACAACTGTGGTATCTGTT
GCAAGTCATTCACTCTGCTGCACCAGCTGAAAGCTCACCTGCAAACGCTA
ACCCACCGCAACAAAATGGAGCAAACCATTCCCAGCTCTCCGGAAATGTT
AGAGAGCTAACGAAGCTTTCTAGACCAT

BS01148.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-RB 1248 CG14710-PB 1..1248 113..1360 6240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-RB 1458 CG14710-RB 25..1368 17..1360 6720 100 Plus
CG6808-RB 1447 CG6808-RB 1275..1398 1360..1237 620 100 Minus
CG6808-RA 3138 CG6808-RA 2966..3089 1360..1237 620 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11620402..11621145 247..990 3720 100 Plus
3R 32079331 3R 11621208..11621453 991..1236 1230 100 Plus
3R 32079331 3R 11620114..11620346 17..249 1165 100 Plus
3R 32079331 3R 11621515..11621638 1237..1360 620 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:58:38 has no hits.

BS01148.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:49 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 1..1248 113..1360 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:56 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 14..1366 8..1360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:42:50 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 25..1368 17..1362 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:50 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 14..1366 8..1360 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:01 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
CG14710-RB 25..1368 17..1362 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:01 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11620114..11620344 17..247 100 -> Plus
3R 11620403..11621145 248..990 100 -> Plus
3R 11621208..11621453 991..1236 100 -> Plus
3R 11621515..11621638 1237..1362 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:42:50 Download gff for BS01148.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7445836..7446066 17..247 100 -> Plus
arm_3R 7446125..7446867 248..990 100 -> Plus
arm_3R 7446930..7447175 991..1236 100 -> Plus
arm_3R 7447237..7447360 1237..1362 98   Plus

BS01148.pep Sequence

Translation from 16 to 1359

> BS01148.pep
MRSHSAGLKLFKTHLIEISLNFQPPCKKTLARMASLPVILQCRICLGDFE
ESQMICLFGDKGESDLRKKLELCCRIRVRQSPQLPEKACNSCCEFVQMWF
NFRQMCLNSQVYWETSSSERPEALAQASDAEYMLYLYENLHLKLGTENQE
KEEITAIEEGDEQQEDQSQEVLDFNGFIINESIEEDEEPNTESPEQILIS
HMDSYVDDQQMEELIDDKGELVEELSNANTFYEVEYGDEELLMSSAPSPH
PSFKMDKQKPGRPRKPDAELKFKRKDINAKERGNQPKCKEEEKFMCILCG
NVFYKKSVFTAHMMTHSEYKPHQCEICNKSFRQMGELRAHIRRHTGDRPY
KCMYCDRHFYDRSERVRHERVHTNTRPYACQECGKTFTHTAILKNHILSH
SAQKNYNCGICCKSFTLLHQLKAHLQTLTHRNKMEQTIPSSPEMLES*

BS01148.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14710-PB 415 CG14710-PB 1..415 33..447 2245 100 Plus
trem-PA 439 CG4413-PA 12..419 42..437 479 28.2 Plus
CG14711-PA 377 CG14711-PA 1..363 36..431 471 29.3 Plus
CG4854-PA 319 CG4854-PA 10..308 40..424 418 27.5 Plus
CG4424-PA 345 CG4424-PA 188..325 295..432 414 49.3 Plus
CG4854-PA 319 CG4854-PA 180..285 324..429 193 31.1 Plus