Clone BS01150 Report

Search the DGRC for BS01150

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:11
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG3313-RA
Protein status:BS01150.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01150.3prime Sequence

890 bp (720 high quality bases) assembled on 2005-11-30

> BS01150.3prime
ATGGTCTAGAAAGCTTCGCTATTGCCAAACGCCCGCATAGTTGCCCACCA
AAGTCGCCGGCAGTGGTCCTCCTGCAGCGAAGAGGCGCATCCTAGTGCTG
TCATAGCAGTGGGTGTAGATGGCGGGCACATACTTCACCTGCTGGAAGCC
ATCCATCTCATCCTCCGGATACACAATTCCTTTGCTGCACTTGAGTGCGA
CTGTGCGCGAGGCATTCACACTGCTCTCCAAATACTTTCCGGCTCGAATG
TCGTAGAATAGGAGCATGCCCAGACCCGTGCCAACGGTGAGCAGGTTACC
TTCGAACGAAGTCGCCCGTATACCGCAGCCACTGTATCGAGATGTGATCT
TCTTAATGGTTTGAAGGGTTCGGGCGTCCAAAAGGATGGTATAGGAACGG
CATCCAACGGCATAAAGGCCGTCGCTGTGGTAGGCGATGCTCACGTTGTC
CTGGCAGTTTGGCAGCTTTCGTGAGAGTGTCTGCTTGAAGGTCTCCGCAT
TGAAGATGTGAATGTATCCGTTCAGCGAGAGGGCGGCGATCTCCTTAAAC
TCCTTGTTGAAGCAAAGAGATCGAATCCTCTGGGCAGTGCGAACTTCCTT
GACACTAAGGGGGTGGATGGTTGCGAATGTGGGACACGCTTCCTCGCCGC
CATCTGGAAACTCCATGTGATCCTCGTTGATGCGCCACAGAGCCATGCGC
GAGTCCTTCGATCCGGACACAAGAAACTGGTCATCCAGCCAGCACATGCC
CATTATAAGGTCGCGGTGCCCACCCTCGCCCACACAGACGGGATCCAGCG
TAGGCAGTCGGTAAACAGCAAATATCGAGGAGTTGCGCGCACCGGTGGGC
TAGAAGGATCGGCTGGGCGACAGCTCGATGGCATGCAGGC

BS01150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-PA 1380 CG3313-RA 578..1380 821..19 4015 100 Minus
CG3313-PA 1380 CG3313-RA 509..546 890..853 190 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:44:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-RB 1897 CG3313-RB 722..1593 890..19 4270 99.5 Minus
CG3313-RA 1783 CG3313-RA 608..1479 890..19 4270 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:44:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12015464..12015869 172..577 2030 100 Plus
3R 32079331 3R 12015928..12016241 577..890 1435 97.1 Plus
3R 32079331 3R 12015247..12015400 19..172 770 100 Plus
Blast to na_te.dros performed on 2015-02-06 15:44:16 has no hits.

BS01150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:12 Download gff for BS01150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-PA 509..1380 19..890 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:33 Download gff for BS01150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-PA 509..1380 19..890 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:16:05 Download gff for BS01150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 569..1440 19..890 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:00:10 Download gff for BS01150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 608..1479 19..890 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:00:10 Download gff for BS01150.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 12015247..12015399 19..171 100 <- Plus
3R 12015464..12015868 172..576 100 <- Plus
3R 12015928..12016241 577..890 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:16:05 Download gff for BS01150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7840969..7841121 19..171 100 <- Plus
arm_3R 7841186..7841590 172..576 100 <- Plus
arm_3R 7841650..7841963 577..890 98   Plus

BS01150.5prime Sequence

811 bp (770 high quality bases) assembled on 2005-11-30

> BS01150.5prime
GAAGTTATCAGTCGACATGTTCAACGGGATGGTGAGAACCATCCGCGACA
GCGTCGTGGGCACCTATCCGTCCTGCCACGTATCCTCGCGGCTGGAGGAG
CGCAGGGCCAAGCAGCGGGCGATGCGACAGGAGCGTAGACGAAAACCGGA
CAAACCAGACGACTTTGTTACTTACGAGGATTCCGGCAGCGACGAGGAGA
CGCCCCAACAGCAGGAGGAGGTCCTGAACACATCCTACAACCTGTGCGAC
TACCTGCGCAGCCGGGAGAGTGGACTCCGAGATCGTCGCAGTGTCAATGT
GGAGTACACCAGCCGCTATGTGCTAACCCACGACATGCTGCGCGAGACGC
AGATTAGTCTGGGCTACATCAACAAGGTCTTCTGCTCCAAGTGGCTGAGC
AGTCGACAAGTGGTTTTCGGGACCAAGTGCAATAAACTGCTCGTCTACGA
TGTGAACATGCGCCGGGTGGACGCCATCCCAACGCTCTCAAATAGCCGGG
CAAACCATCCTGAGGTCCAGGGTGGCCTGCATGCCATCGAGCTGTCGCCC
AGCCGATCCTTCCTAGCCACCGGTGCGCGCAACTCCTCCGATATTGCTGT
TTACCGACTGCCTACGCTGGATCCCGTCTGTGTGGGCGAGGGTGGGCACC
GCGACCTTATAATGGGCATGTGCTGGCTGGATGACCAGTTTCTTGTGTCC
GGATCGAAGGACTCGCGCATGGCTCTGTGGCGCATCAACGAGGATCACAT
GGAGTTTCCAGATGGCGGCGAGGAAGCGTGTCCCACATTTCGCACCATCC
ACCCCCTTAGT

BS01150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-PA 1380 CG3313-RA 1..773 17..789 3865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-RB 1897 CG3313-RB 214..1008 17..811 3930 99.7 Plus
CG3313-RA 1783 CG3313-RA 100..894 17..811 3930 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12015955..12016482 811..284 2580 99.2 Minus
3R 32079331 3R 12016552..12016818 283..17 1335 100 Minus
Blast to na_te.dros performed on 2015-02-13 08:03:58 has no hits.

BS01150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:13 Download gff for BS01150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-PA 1..795 17..811 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:34 Download gff for BS01150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-PA 1..795 17..811 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:35:20 Download gff for BS01150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 61..855 17..811 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:05:34 Download gff for BS01150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 100..894 17..811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:05:34 Download gff for BS01150.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12015955..12016482 284..811 99 <- Minus
3R 12016552..12016818 17..283 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:35:20 Download gff for BS01150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7841677..7842204 284..811 99 <- Minus
arm_3R 7842274..7842540 17..283 100   Minus

BS01150.complete Sequence

1414 bp (1414 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634544

> BS01150.complete
GAAGTTATCAGTCGACATGTTCAACGGGATGGTGAGAACCATCCGCGACA
GCGTCGTGGGCACCTATCCGTCCTGCCACGTATCCTCGCGGCTGGAGGAG
CGCAGGGCCAAGCAGCGGGCGATGCGACAGGAGCGTAGACGAAAACCGGA
CAAACCAGACGACTTTGTTACTTACGAGGATTCCGGCAGCGACGAGGAGA
CGCCCCAACAGCAGGAGGAGGTCCTGAACACATCCTACAACCTGTGCGAC
TACCTGCGCAGCCGGGAGAGTGGACTCCGAGATCGTCGCAGTGTCAATGT
GGAGTACACCAGCCGCTATGTGCTAACCCACGACATGCTGCGCGAGACGC
AGATTAGTCTGGGCTACATCAACAAGGTCTTCTGCTCCAAGTGGCTGAGC
AGTCGACAAGTGGTTTTCGGGACCAAGTGCAATAAACTGCTCGTCTACGA
TGTGAACATGCGCCGGGTGGACGCCATCCCAACGCTCTCAAATAGCCGGG
CAAACCATCCTGAGGTCCAGGGTGGCCTGCATGCCATCGAGCTGTCGCCC
AGCCGATCCTTCCTAGCCACCGGTGCGCGCAACTCCTCCGATATTGCTGT
TTACCGACTGCCTACGCTGGATCCCGTCTGTGTGGGCGAGGGTGGGCACC
GCGACCTTATAATGGGCATGTGCTGGCTGGATGACCAGTTTCTTGTGTCC
GGATCGAAGGACTCGCGCATGGCTCTGTGGCGCATCAACGAGGATCACAT
GGAGTTTCCAGATGGCGGCGAGGAAGCGTGTCCCACATTCGCAACCATCC
ACCCCCTTAGTGTCAAGGAAGTTCGCACTGCCCAGAGGATTCGATCTCTT
TGCTTCAACAAGGAGTTTAAGGAGATCGCCGCCCTCTCGCTGAACGGATA
CATTCACATCTTCAATGCGGAGACCTTCAAGCAGACACTCTCACGAAAGC
TGCCAAACTGCCAGGACAACGTGAGCATCGCCTACCACAGCGACGGCCTT
TATGCCGTTGGATGCCGTTCCTATACCATCCTTTTGGACGCCCGAACCCT
TCAAACCATTAAGAAGATCACATCTCGATACAGTGGCTGCGGTATACGGG
CGACTTCGTTCGAAGGTAACCTGCTCACCGTTGGCACGGGTCTGGGCATG
CTCCTATTCTACGACATTCGAGCCGGAAAGTATTTGGAGAGCAGTGTGAA
TGCCTCGCGCACAGTCGCACTCAAGTGCAGCAAAGGAATTGTGTATCCGG
AGGATGAGATGGATGGCTTCCAGCAGGTGAAGTATGTGCCCGCCATCTAC
ACCCACTGCTATGACAGCACTAGGATGCGCCTCTTCGCTGCAGGAGGACC
ACTGCCGGCGACTTTGGTGGGCAACTATGCGGGCGTTTGGCAATAGCGAA
GCTTTCTAGACCAT

BS01150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-RB 1380 CG3313-PB 1..1380 17..1396 6900 100 Plus
CG3313-RA 1380 CG3313-PA 1..1380 17..1396 6900 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-RB 1897 CG3313-RB 214..1593 17..1396 6900 100 Plus
CG3313-RA 1783 CG3313-RA 100..1479 17..1396 6900 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:04:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12015928..12016482 838..284 2775 100 Minus
3R 32079331 3R 12015464..12015869 1243..838 2030 100 Minus
3R 32079331 3R 12016552..12016818 283..17 1335 100 Minus
3R 32079331 3R 12015247..12015400 1396..1243 770 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:04:40 has no hits.

BS01150.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:57 Download gff for BS01150.complete
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 214..1593 17..1396 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:09 Download gff for BS01150.complete
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 66..1440 22..1398 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:51 Download gff for BS01150.complete
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 214..1593 17..1396 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:09:51 Download gff for BS01150.complete
Subject Subject Range Query Range Percent Splice Strand
CG3313-RA 105..1479 22..1398 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:09:51 Download gff for BS01150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12015245..12015399 1244..1398 98 <- Minus
3R 12015464..12015868 839..1243 100 <- Minus
3R 12015928..12016482 284..838 100 <- Minus
3R 12016552..12016813 22..283 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:09 Download gff for BS01150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7840967..7841121 1244..1398 98 <- Minus
arm_3R 7841186..7841590 839..1243 100 <- Minus
arm_3R 7841650..7842204 284..838 100 <- Minus
arm_3R 7842274..7842535 22..283 100   Minus

BS01150.pep Sequence

Translation from 16 to 1395

> BS01150.pep
MFNGMVRTIRDSVVGTYPSCHVSSRLEERRAKQRAMRQERRRKPDKPDDF
VTYEDSGSDEETPQQQEEVLNTSYNLCDYLRSRESGLRDRRSVNVEYTSR
YVLTHDMLRETQISLGYINKVFCSKWLSSRQVVFGTKCNKLLVYDVNMRR
VDAIPTLSNSRANHPEVQGGLHAIELSPSRSFLATGARNSSDIAVYRLPT
LDPVCVGEGGHRDLIMGMCWLDDQFLVSGSKDSRMALWRINEDHMEFPDG
GEEACPTFATIHPLSVKEVRTAQRIRSLCFNKEFKEIAALSLNGYIHIFN
AETFKQTLSRKLPNCQDNVSIAYHSDGLYAVGCRSYTILLDARTLQTIKK
ITSRYSGCGIRATSFEGNLLTVGTGLGMLLFYDIRAGKYLESSVNASRTV
ALKCSKGIVYPEDEMDGFQQVKYVPAIYTHCYDSTRMRLFAAGGPLPATL
VGNYAGVWQ*

BS01150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3313-PB 459 CG3313-PB 1..459 1..459 2409 100 Plus
CG3313-PA 459 CG3313-PA 1..459 1..459 2409 100 Plus