Clone Sequence Records
BS01155.3prime Sequence
656 bp (655 high quality bases) assembled on 2005-11-30
> BS01155.3prime
ATGGTCTAGAAAGCTTCGCTATCCGTTGAGCTCGTCGTTCCGGTGCTTGC
GCATATGTCCAGCGAGACCGGCGGCCTGGGCATAGGCATTCCCGCACAGC
TTGCACACGAACTGCTTGGTGTCCGCGTGCAGGAACTTGTGGTGGTAGAG
GCCTTTCTGTCGGGAGAAGGTCGCACCGCAAACGCTGCACACATGCGGTC
GCTCCGTGGAATGCATGGCCATGTGCTCTCGCAGGCCGGAATGGGAGGGG
AATCTTTTGTCGCACACTTGACACCCGAACGGCCGTTCGCCCGTGTGGCT
CCTGATGTGGACGCGCAGCGTCTCCTTGTTCCGGCAGCTGTAGCCGCAGC
TCTCGCAGACGAAGTTCTTTTGCTCCGTGTGCACCTTGCCGTGATTGCGC
ATATGACGGATGGTGAAGAAGCGCTTGCCGCAGCCGGGATGCGGGCAGGG
CACGTTCCGTTCGCTGGTGTGCTTGAGCTGGTGGCGTTTCAGTTCGTGTC
GCGTCTTGTAGCGCCGCCCGCAAACCACACAGGCAGCGCCGCCATGCGCC
TGCACCATGTGCTCGTCCAGCAGGCGCAGGCGCGGCAATTGGGCCTCGCA
TTCCAGGCAGGTGAAGATGGCGGAGCCTCCTTCCTCGCCGTTGTCATGAT
CCCGCT
BS01155.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-PA | 1398 | CG2129-RA | 761..1398 | 656..19 | 3190 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-RA | 2017 | CG2129-RA | 871..1508 | 656..19 | 3190 | 100 | Minus |
| CG10959-RB | 1830 | CG10959-RB | 1242..1347 | 170..65 | 200 | 80.4 | Minus |
| CG10959-RA | 1836 | CG10959-RA | 1248..1353 | 170..65 | 200 | 80.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8146709..8147346 | 656..19 | 3190 | 100 | Minus |
| X | 23542271 | X | 8150098..8150203 | 170..65 | 200 | 79.2 | Minus |
Blast to na_te.dros performed on 2015-02-01 09:00:02 has no hits.
BS01155.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:22 Download gff for
BS01155.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-PA | 761..1398 | 19..656 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:46 Download gff for
BS01155.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-PA | 761..1398 | 19..656 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:13:11 Download gff for
BS01155.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 871..1510 | 16..656 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:53:08 Download gff for
BS01155.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 871..1510 | 16..656 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:53:08 Download gff for
BS01155.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8146709..8147348 | 16..656 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:13:11 Download gff for
BS01155.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8040742..8041381 | 16..656 | 99 | | Minus |
BS01155.5prime Sequence
787 bp (786 high quality bases) assembled on 2005-11-30
> BS01155.5prime
GAAGTTATCAGTCGACATGCTCAAGTCCCTCAAGCCGGACACGTACGCCG
GAATGGCGAACGCCAAGTGCGGCGAGATCTACTTCCAGAGCCTGCACAGC
TTCCGCATCGACTGTGCGTTCTGCGAGATGAAGAGCTTTGTGTTCGGAGA
CTTCCTGCTCCACGTCCAGAACATTCACTTCGAGAACGGCCTGCTGAAGA
CGGAGGCAACGGACGCCGGTGCGAATCTCAAGCAGGAGCGGGATCGTGAG
CGGGAGCCTAACTCGCCGGTGCCCATTGTGGCGCAGGTGAATCCATTTGC
CTGGTACGAGATTGGTGGCGATCACAACGAGGACAGCGACGATGAGCGCG
TTGTCCTGGAAAAGCAGGATGAGGACGAAGATGAGCGGCCAGGCAGAAGC
ATAATCAAGTGGCAGGACCATCAGTCGCTGACCAGCGAATCTCTACGTCA
AGTCCGAGCCCTCAAGGTGGACTACAAGGAGGAAGACTCCGAGCAGGAGG
AGTGCGGCATGGAGCTGGATCTGGACAGCGAAGGCAGGCACTCTGCCAAG
ATTCCGCACTCGTGTCCGCACTGCACAAAAGTTTACCAGAGCCGCAAGGT
CCTCGAACGCCACATAATGCGCCAGCACAAAGACACTCTCTCGCCGGATG
TGGACAGCGAGGACGCGGACTACGAGCCGCCCAAGGATGCGCCCGTCAAG
TCCGCTGCCCAGGAGTACAAGTGCGAGCACTGCGGCAAGATCTACCATGG
CAAATACAGTCTGCGTCAGCATTTAAAGCGGGATCAT
BS01155.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-PA | 1398 | CG2129-RA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-RA | 2017 | CG2129-RA | 110..881 | 16..787 | 3860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8145948..8146719 | 16..787 | 3860 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 20:55:30 has no hits.
BS01155.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:23 Download gff for
BS01155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-PA | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:48 Download gff for
BS01155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-PA | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:53:25 Download gff for
BS01155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 110..881 | 16..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:31:12 Download gff for
BS01155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 110..881 | 16..787 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:31:12 Download gff for
BS01155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8145948..8146719 | 16..787 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:53:25 Download gff for
BS01155.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8039981..8040752 | 16..787 | 100 | | Plus |
BS01155.complete Sequence
1432 bp (1432 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634547
> BS01155.complete
GAAGTTATCAGTCGACATGCTCAAGTCCCTCAAGCCGGACACGTACGCCG
GAATGGCGAACGCCAAGTGCGGCGAGATCTACTTCCAGAGCCTGCACAGC
TTCCGCATCGACTGTGCGTTCTGCGAGATGAAGAGCTTTGTGTTCGGAGA
CTTCCTGCTCCACGTCCAGAACATTCACTTCGAGAACGGCCTGCTGAAGA
CGGAGGCAACGGACGCCGGTGCGAATCTCAAGCAGGAGCGGGATCGTGAG
CGGGAGCCTAACTCGCCGGTGCCCATTGTGGCGCAGGTGAATCCATTTGC
CTGGTACGAGATTGGTGGCGATCACAACGAGGACAGCGACGATGAGCGCG
TTGTCCTGGAAAAGCAGGATGAGGACGAAGATGAGCGGCCAGGCAGAAGC
ATAATCAAGTGGCAGGACCATCAGTCGCTGACCAGCGAATCTCTACGTCA
AGTCCGAGCCCTCAAGGTGGACTACAAGGAGGAAGACTCCGAGCAGGAGG
AGTGCGGCATGGAGCTGGATCTGGACAGCGAAGGCAGGCACTCTGCCAAG
ATTCCGCACTCGTGTCCGCACTGCACAAAAGTTTACCAGAGCCGCAAGGT
CCTCGAACGCCACATAATGCGCCAGCACAAAGACACTCTCTCGCCGGATG
TGGACAGCGAGGACGCGGACTACGAGCCGCCCAAGGATGCGCCCGTCAAG
TCCGCTGCCCAGGAGTACAAGTGCGAGCACTGCGGCAAGATCTACCATGG
CAAATACAGTCTGCGTCAGCATTTAAAGCGGGATCATGACAACGGCGAGG
AAGGAGGCTCCGCCATCTTCACCTGCCTGGAATGCGAGGCCCAATTGCCG
CGCCTGCGCCTGCTGGACGAGCACATGGTGCAGGCGCATGGCGGCGCTGC
CTGTGTGGTTTGCGGGCGGCGCTACAAGACGCGACACGAACTGAAACGCC
ACCAGCTCAAGCACACCAGCGAACGGAACGTGCCCTGCCCGCATCCCGGC
TGCGGCAAGCGCTTCTTCACCATCCGTCATATGCGCAATCACGGCAAGGT
GCACACGGAGCAAAAGAACTTCGTCTGCGAGAGCTGCGGCTACAGCTGCC
GGAACAAGGAGACGCTGCGCGTCCACATCAGGAGCCACACGGGCGAACGG
CCGTTCGGGTGTCAAGTGTGCGACAAAAGATTCCCCTCCCATTCCGGCCT
GCGAGAGCACATGGCCATGCATTCCACGGAGCGACCGCATGTGTGCAGCG
TTTGCGGTGCGACCTTCTCCCGACAGAAAGGCCTCTACCACCACAAGTTC
CTGCACGCGGACACCAAGCAGTTCGTGTGCAAGCTGTGCGGGAATGCCTA
TGCCCAGGCCGCCGGTCTCGCTGGACATATGCGCAAGCACCGGAACGACG
AGCTCAACGGATAGCGAAGCTTTCTAGACCAT
BS01155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-RA | 1398 | CG2129-PA | 1..1398 | 17..1414 | 6990 | 100 | Plus |
| CG10959-RB | 1326 | CG10959-PB | 1127..1232 | 1263..1368 | 200 | 79.2 | Plus |
| CG10959-RA | 1332 | CG10959-PA | 1133..1238 | 1263..1368 | 200 | 79.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-RA | 2017 | CG2129-RA | 110..1508 | 16..1414 | 6995 | 100 | Plus |
| CG10959-RB | 1830 | CG10959-RB | 1242..1347 | 1263..1368 | 200 | 79.2 | Plus |
| CG10959-RA | 1836 | CG10959-RA | 1248..1353 | 1263..1368 | 200 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8145948..8147346 | 16..1414 | 6995 | 100 | Plus |
| X | 23542271 | X | 8150098..8150203 | 1263..1368 | 200 | 79.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:58:43 has no hits.
BS01155.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:43 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 1..1398 | 17..1414 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:46 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 12..1412 | 16..1417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:29 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 111..1509 | 17..1416 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:43 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 12..1412 | 16..1417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:09 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2129-RA | 111..1509 | 17..1416 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:09 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8145949..8147347 | 17..1416 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:29 Download gff for
BS01155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8039982..8041380 | 17..1416 | 99 | | Plus |
BS01155.pep Sequence
Translation from 16 to 1413
> BS01155.pep
MLKSLKPDTYAGMANAKCGEIYFQSLHSFRIDCAFCEMKSFVFGDFLLHV
QNIHFENGLLKTEATDAGANLKQERDREREPNSPVPIVAQVNPFAWYEIG
GDHNEDSDDERVVLEKQDEDEDERPGRSIIKWQDHQSLTSESLRQVRALK
VDYKEEDSEQEECGMELDLDSEGRHSAKIPHSCPHCTKVYQSRKVLERHI
MRQHKDTLSPDVDSEDADYEPPKDAPVKSAAQEYKCEHCGKIYHGKYSLR
QHLKRDHDNGEEGGSAIFTCLECEAQLPRLRLLDEHMVQAHGGAACVVCG
RRYKTRHELKRHQLKHTSERNVPCPHPGCGKRFFTIRHMRNHGKVHTEQK
NFVCESCGYSCRNKETLRVHIRSHTGERPFGCQVCDKRFPSHSGLREHMA
MHSTERPHVCSVCGATFSRQKGLYHHKFLHADTKQFVCKLCGNAYAQAAG
LAGHMRKHRNDELNG*
BS01155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:11:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2129-PA | 465 | CG2129-PA | 1..465 | 1..465 | 2561 | 100 | Plus |
| CG10959-PB | 441 | CG10959-PB | 23..419 | 17..459 | 671 | 33.9 | Plus |
| CG10959-PA | 443 | CG10959-PA | 23..421 | 17..459 | 668 | 34.2 | Plus |
| CG18262-PA | 469 | CG18262-PA | 8..418 | 7..465 | 484 | 26.2 | Plus |
| dwg-PA | 592 | CG2711-PA | 162..526 | 106..461 | 389 | 27.9 | Plus |
| CG10959-PB | 441 | CG10959-PB | 201..366 | 296..462 | 212 | 30.4 | Plus |
| CG10959-PA | 443 | CG10959-PA | 203..368 | 296..462 | 212 | 30.4 | Plus |
