Clone Sequence Records
BS01157.3prime Sequence
880 bp (765 high quality bases) assembled on 2005-11-30
> BS01157.3prime
ATGGTCTAGAAAGCTTCGCTAATCCTGTTTGGCCTTGGCCATCTCGCGAG
TTATCGCTCTCAGTTCTTCCAATGTTGGCACTGGAACACGTGAAGATTCG
GTTTCATCCTCCTTGGACGCCAGTTCCGGATGTTTTTTCCATTTGTGGGA
GCGACAGTTGGTGTTGCTGGCGAACGCCTTTCCGCAGTACTTGCATACGT
AGGGTCTGAGGCCGGTGTGTCCAAGGAGATGGATCTTCAAGGCCGTGGAG
TTCTTACAGCCGCTGCCACAAACCTCGCACTTGAAGCGCCGCTCATCCGT
GTGCACATACTTGTGCTTGTTAAGAATCGCCCGTGTCTGCAGCTTTTTGC
CGCAGACATTGCACTCAAACTTGGGCTCACCATGTGTCTGACTGTGCACT
CTCAGCCTAGCTTTGTTCTTAAAACCAGCATTGCAGACGGGGCATATACA
GGGCTTCTCTTCCGTGTGAACCAGCTGGTGCTCCACCAGCGATGTGAAGG
TCTTCAAACCCTTTCCGCAGTGATCGCAAACGTATTTCTTCGGACCGCCG
TGCATGTCGTGCTTGTGCCTGCGCAGAGCCATGAAGGACATAAAGGTTTC
GTTGCAGATTTTGCAGGGATAATCGACGAAATTCGAACTCTGGGAGCCAT
GGGGTGACATGCTCAATTCGGATGTCTTGTCATCTTGTTTGGATTTAGCA
TTGTCGTCTGGTTCGCGGGAAGTTACGTTATCGCTGTCGTCCACGTTTTT
CTGTTTGCCTGAGCCCTTGGGTCTGCCTCTTTTTCGCTTCAAAGGCGGCG
GGGATACGGCCTCGTCTTCGTCTAGAATGGCCTCCTCATCATCCGACTCG
GTTGCAGTGTACACTTTTGGAATTCGCTTA
BS01157.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4148-PA | 1413 | wek-RA | 565..1413 | 867..19 | 4245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:44:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wek-RB | 2033 | CG4148-RB | 670..1531 | 880..19 | 4265 | 99.8 | Minus |
| wek-RA | 1691 | CG4148-RA | 670..1531 | 880..19 | 4265 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15767138..15767620 | 398..880 | 2370 | 99.4 | Plus |
| 2L | 23513712 | 2L | 15766733..15767079 | 53..399 | 1735 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 15:44:25 has no hits.
BS01157.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:25 Download gff for
BS01157.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-PA | 553..1413 | 19..879 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:51 Download gff for
BS01157.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4148-PA | 553..1413 | 19..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:16:07 Download gff for
BS01157.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 671..1539 | 11..879 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:00:16 Download gff for
BS01157.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 671..1539 | 11..879 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:00:16 Download gff for
BS01157.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15766733..15767079 | 53..399 | 100 | <- | Plus |
| 2L | 15767140..15767619 | 400..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:16:07 Download gff for
BS01157.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15766733..15767079 | 53..399 | 100 | <- | Plus |
| arm_2L | 15767140..15767619 | 400..879 | 99 | | Plus |
BS01157.5prime Sequence
887 bp (685 high quality bases) assembled on 2005-11-30
> BS01157.5prime
GAAGTTATCAGTCGACATGGGAGTTCCCACAAGCGATTGGATATACTGGT
GTCGCCTGTGCGCCCGCGACGACGTTGTATACAAAGTGCGCGAGCGGGAC
GACGATCTGGTTAGGATTATCAGCAAATGCTTTGATGTGGAGATGACCCT
CGAGGAACCGGAACTGGGCAGCATGTTGTGCGAGGAGTGCTACTCGGTGA
TTGGCCAGCTGATCACCTTCTCGGATAGCGTTTCCAAAGTACAAGCCATT
TTTGAGCTTCTGCGACACTCGGAGCCGCAGGATAGCCAGGACTTGGACGC
CCTGCGTCTGGAATACGGCCTTCCGCCGGCCTGCAAGCAGGACCTCGAGT
TCCTGGACATAGACGATACGGAGGATAGGTGTTCCTTGGTAGAGGAGCTA
ACGATATCAGACCATTCCACATCTCCGTCACCCGATTTTGAAGCACAGAC
CGTGCGAACACGAGCTAATCTCAAACAGTGTAATTCCGATCCCAAAGTGC
TAGCCTCACCTACTGCATCAATTCCTGAAGTTGAAACAAAACGAAGTCGC
CGACAGCAGTTTGCGGCTAAGCGAAATTCCAAAGTGTACACTGCAACCGA
GTCGGATGATGAGGAGGCCATTCTAGACGAAGACGAGGCCGTATCCCCGC
CGCCTTTGAAGCGAANAAGAGGCAGACCCAAGGGCTCAGGCAAACAGAAA
AACGTGGACGACAGCGATAACGTAACTTCCCGCGAACCAGACGACAATGC
TAAATCTAAACAAGATGACAAGACATCCGAATTGAGCATGTCACCCCATG
GCTCCCAGAGTTCGAATTTCGTCGATTATCCCTGCAAAATCTGCAACGAA
ACCTTTATGTCCTTCATGGCTCTGCGCAAGCACAAGC
BS01157.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4148-PA | 1413 | wek-RA | 1..871 | 17..887 | 4286 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wek-RB | 2033 | CG4148-RB | 118..989 | 16..887 | 4319 | 99.7 | Plus |
| wek-RA | 1691 | CG4148-RA | 118..989 | 16..887 | 4319 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:44:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15767301..15768047 | 887..141 | 3694 | 99.6 | Minus |
| 2L | 23513712 | 2L | 15768106..15768232 | 142..16 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:44:18 has no hits.
BS01157.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:02:26 Download gff for
BS01157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-PA | 1..871 | 17..887 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:09:53 Download gff for
BS01157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4148-PA | 1..871 | 17..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:36:14 Download gff for
BS01157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 112..989 | 7..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:46:15 Download gff for
BS01157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 112..989 | 7..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:46:15 Download gff for
BS01157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15767301..15768045 | 143..887 | 99 | <- | Minus |
| 2L | 15768106..15768238 | 7..142 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:36:14 Download gff for
BS01157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15767301..15768045 | 143..887 | 99 | <- | Minus |
| arm_2L | 15768106..15768238 | 7..142 | 97 | | Minus |
BS01157.complete Sequence
1447 bp (1447 high quality bases) assembled on 2005-10-17
GenBank Submission: FJ634548
> BS01157.complete
GAAGTTATCAGTCGACATGGGAGTTCCCACAAGCGATTGGATATACTGGT
GTCGCCTGTGCGCCCGCGACGACGTTGTATACAAAGTGCGCGAGCGGGAC
GACGATCTGGTTAGGATTATCAGCAAATGCTTTGATGTGGAGATGACCCT
CGAGGAACCGGAACTGGGCAGCATGTTGTGCGAGGAGTGCTACTCGGTGA
TTGGCCAGCTGATCACCTTCTCGGATAGCGTTTCCAAAGTACAAGCCATT
TTTGAGCTTCTGCGACACTCGGAGCCGCAGGATAGCCAGGACTTGGACGC
CCTGCGTCTGGAATACGGCCTTCCGCCGGCCTGCAAGCAGGACCTCGAGT
TCCTGGACATAGACGATACGGAGGATAGGTGTTCCTTGGTAGAGGAGCTA
ACGATATCAGACCATTCCACATCTCCGTCACCCGATTTTGAAGCACAGAC
CGTGCGAACACGAGCTAATCTCAAACAGTGTAATTCCGATCCCAAAGTGC
TAGCCTCACCTACTGCATCAATTCCTGAAGTTGAAACAAAACGAAGTCGC
CGACAGCAGTTTGCGGCTAAGCGAAATTCCAAAGTGTACACTGCAACCGA
GTCGGATGATGAGGAGGCCATTCTAGACGAAGACGAGGCCGTATCCCCGC
CGCCTTTGAAGCGAAAAAGAGGCAGACCCAAGGGCTCAGGCAAACAGAAA
AACGTGGACGACAGCGATAACGTAACTTCCCGCGAACCAGACGACAATGC
TAAATCCAAACAAGATGACAAGACATCCGAATTGAGCATGTCACCCCATG
GCTCCCAGAGTTCGAATTTCGTCGATTATCCCTGCAAAATCTGCAACGAA
ACCTTTATGTCCTTCATGGCTCTGCGCAGGCACAAGCACGACATGCACGG
CGGTCCGAAGAAATACGTTTGCGATCACTGCGGAAAGGGTTTGAAGACCT
TCACATCGCTGGTGGAGCACCAGCTGGTTCACACGGAAGAGAAGCCCTGT
ATATGCCCCGTCTGCAATGCTGGTTTTAAGAACAAAGCTAGGCTGAGAGT
GCACAGTCAGACACATGGTGAGCCCAAGTTTGAGTGCAATGTCTGCGGCA
AAAAGCTGCAGACACGGGCGATTCTTAACAAGCACAAGTATGTGCACACG
GATGAGCGGCGCTTCAAGTGCGAGGTTTGTGGCAGCGGCTGTAAGAACTC
CACGGCCTTGAAGATCCATCTCCTTGGACACACCGGCCTCAGACCCTACG
TATGCAAGTACTGCGGAAAGGCGTTCGCCAGCAACACCAACTGTCGCTCC
CACAAATGGAAAAAACATCCGGAACTGGCGTCCAAGGAGGATGAAACCGA
ATCTTCACGTGTTCCAGTGCCAACATTGGAAGAACTGAGAGCGATAACTC
GCGAGATGGCCAAGGCCAAACAGGATTAGCGAAGCTTTCTAGACCAT
BS01157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wek-RB | 1413 | CG4148-PB | 1..1413 | 17..1429 | 7065 | 100 | Plus |
| wek-RA | 1413 | CG4148-PA | 1..1413 | 17..1429 | 7065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:08:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wek-RB | 2033 | CG4148-RB | 118..1531 | 16..1429 | 7070 | 100 | Plus |
| wek-RA | 1691 | CG4148-RA | 118..1531 | 16..1429 | 7070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15767138..15768047 | 1050..141 | 4550 | 100 | Minus |
| 2L | 23513712 | 2L | 15766733..15767079 | 1395..1049 | 1735 | 100 | Minus |
| 2L | 23513712 | 2L | 15768106..15768232 | 142..16 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:08:43 has no hits.
BS01157.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:30:24 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 1..1413 | 17..1429 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:14:12 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 80..1507 | 7..1437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:46:20 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 119..1531 | 17..1431 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:30:24 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 80..1507 | 7..1437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:11 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wek-RA | 119..1531 | 17..1431 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:11 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15766632..15766668 | 1396..1431 | 94 | <- | Minus |
| 2L | 15766733..15767079 | 1049..1395 | 100 | <- | Minus |
| 2L | 15767140..15768045 | 143..1048 | 100 | <- | Minus |
| 2L | 15768106..15768231 | 17..142 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:46:20 Download gff for
BS01157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15766632..15766668 | 1396..1431 | 94 | <- | Minus |
| arm_2L | 15766733..15767079 | 1049..1395 | 100 | <- | Minus |
| arm_2L | 15767140..15768045 | 143..1048 | 100 | <- | Minus |
| arm_2L | 15768106..15768231 | 17..142 | 100 | | Minus |
BS01157.pep Sequence
Translation from 16 to 1428
> BS01157.pep
MGVPTSDWIYWCRLCARDDVVYKVRERDDDLVRIISKCFDVEMTLEEPEL
GSMLCEECYSVIGQLITFSDSVSKVQAIFELLRHSEPQDSQDLDALRLEY
GLPPACKQDLEFLDIDDTEDRCSLVEELTISDHSTSPSPDFEAQTVRTRA
NLKQCNSDPKVLASPTASIPEVETKRSRRQQFAAKRNSKVYTATESDDEE
AILDEDEAVSPPPLKRKRGRPKGSGKQKNVDDSDNVTSREPDDNAKSKQD
DKTSELSMSPHGSQSSNFVDYPCKICNETFMSFMALRRHKHDMHGGPKKY
VCDHCGKGLKTFTSLVEHQLVHTEEKPCICPVCNAGFKNKARLRVHSQTH
GEPKFECNVCGKKLQTRAILNKHKYVHTDERRFKCEVCGSGCKNSTALKI
HLLGHTGLRPYVCKYCGKAFASNTNCRSHKWKKHPELASKEDETESSRVP
VPTLEELRAITREMAKAKQD*
BS01157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:24:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wek-PB | 470 | CG4148-PB | 1..470 | 1..470 | 2521 | 100 | Plus |
| wek-PA | 470 | CG4148-PA | 1..470 | 1..470 | 2521 | 100 | Plus |
| CG17568-PA | 513 | CG17568-PA | 5..508 | 6..466 | 823 | 38.5 | Plus |
| CG10366-PA | 578 | CG10366-PA | 21..500 | 4..462 | 539 | 28.7 | Plus |
| CG6254-PA | 634 | CG6254-PA | 392..580 | 270..457 | 524 | 51.3 | Plus |
| CG10366-PA | 578 | CG10366-PA | 349..514 | 257..417 | 178 | 27.6 | Plus |
