Clone Sequence Records
BS01185.3prime Sequence
904 bp (731 high quality bases) assembled on 2005-11-30
> BS01185.3prime
ATGGTCTAGAAAGCTTCGTTAATTATATTCGGCTTTGATGATTTTCTGAT
TTTTTCCGAACGGATTTTCGTAGACCCTTTCGATCTCATAATGGCTCATT
TTATTGCGATGGACGGTCAGGAGAGCTCCACTTTTGAATTTCTGTTCGCA
GACACCGCATTTGTAGCACATAGCCGGGACATCCGGTTTGGGGAGATTTT
CCAGTCTCTGTTGCAATTGGTTTTCGGGAATGCGTTGCAGGCGCATACGC
TCTATATCCTCCGAACGGCGCTGGTTGACCCTAGCATTTACATAAGGATC
AGCAGCAAAATTTGCCTCTACTTCATTGCCCGGAATCACAGCAATCAGAT
GTCCCTTTCGGTTACGATGGATATTCAGGTGCGAACCGCACACAAAGCTC
TCGCCGCACACTCCACACTGATATGGTCGCTCGCCCGTGTGGCGCCGCAT
ATGGATCTTAAGGTCGTTGGACTGCACAAAGCTCTTGCTGCACATTTTGC
AGGAGTACGGCCTTTGACCCGTGTGCAATCGCATGTGTCGCGCCAGCTTG
TTCTGCGAAATAAACTTCTTGGAGCAGATCTTGCACTCACTGGGACGCTC
GCCGGTGTGCTGACGCATGTGAAGACTAAGATCTTGGCTGCGCGGAAAGG
CCTTCTCGCATTGATCGCACTTGTACGGATTATCGCCCGTATGTCGCCGA
ATGTGGATGGTAAGGCTAGATACGGGAAAGCTCAGGCCACAGTGCGGACA
GTCTCGCCGCTTAGCTATGCGTTTTCGGGCGGAATTGTCCGTCGTTTCTT
CGGGTTCCAATGCGATTGCGTCGGGATGGAATGCCTGCATGTGTCGCCGG
AGTGTGTCCTGACGCTTGAATGTCCCGCGACAGTGCTCACAGGGTAGCAG
ACCG
BS01185.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-PA | 1617 | CG3281-RA | 761..1617 | 875..19 | 4285 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:35:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-RA | 1870 | CG3281-RA | 825..1710 | 904..19 | 4370 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11961043..11961928 | 19..904 | 4370 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-01-30 16:35:07 has no hits.
BS01185.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:03:06 Download gff for
BS01185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-PA | 732..1617 | 19..904 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:10:46 Download gff for
BS01185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-PA | 732..1617 | 19..904 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:27:06 Download gff for
BS01185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 825..1712 | 15..904 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:52:58 Download gff for
BS01185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 825..1712 | 15..904 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:52:58 Download gff for
BS01185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11961041..11961928 | 15..904 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:27:06 Download gff for
BS01185.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7786763..7787650 | 15..904 | 99 | | Plus |
BS01185.5prime Sequence
781 bp (779 high quality bases) assembled on 2005-11-30
> BS01185.5prime
GAAGTTATCAGTCGACATGGACACACCGGAGATCCACGTAAATATAAGCT
CGCAGACTTGCCGCGTCTGCCTGGAGACGCACGAGACCAATCTGTATGTC
CACGATGAAATCAAATACAACGACCTTAAGTTGGAGCTCTGGCAGTTGTT
GGAGGCAGTTTCCAAATTGAAGTGGACATGGACGGACCCAAATCTGCCTA
TGCATCTGTGTCAAAATTGCGCCCGCCGGCTGATCGGCGCCTATGAGTTC
ATCGTCGAAGTGGAAAACGCCCATGAAACTTTACAGAATCTCTTCGAGCA
ACAGGAAGTTGCTGCCAAGCCGGATGAAGTTCATGTGGATGTCGTGGAGC
TTATAGACCAAGACGATGTGGTCAGTATGGCACAATACCTGTCCACGTCT
TTTGCCGAACAGCACGTGGAAATGGAGGAGAAGTATGGAGACCAAGACTG
TTCAGCTTTTACTTCAGATGTGGGCGAAGAGCCACTCTATGCGAGCGAGG
ATCGTGATGATGAGCCTGAAGACTCCTTTCAGCTGAAGCCTCGGCCAGAT
GAAATAGAAAACAGAGAATTGTCGCGACCTTCCCAGCTGGGCAGTCGTTT
GAACCATTCGGCGAACTTCATCTACAAGTGCGCCGTCTGTCCGCGTGTCT
TTGCCAAAAGTGAATCTCTGACTCGTCATTTTTCCCAAGCCCACAAACTG
ACAGCGGACGTGGCCGCCATGAAGCTGGCCAACGAGAGCTGCGGCACCGG
TCTGCTAACCTGTGAGCACTGTCCGCGGACA
BS01185.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-PA | 1617 | CG3281-RA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:55:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-RA | 1870 | CG3281-RA | 93..858 | 16..781 | 3830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:55:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11961895..11962505 | 781..171 | 3055 | 100 | Minus |
| 3R | 32079331 | 3R | 11962557..11962713 | 172..16 | 785 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:55:28 has no hits.
BS01185.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:03:07 Download gff for
BS01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-PA | 1..764 | 17..780 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:10:47 Download gff for
BS01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-PA | 1..764 | 17..780 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:33:25 Download gff for
BS01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 93..857 | 16..780 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:03:26 Download gff for
BS01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 93..857 | 16..780 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:03:26 Download gff for
BS01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11961896..11962503 | 173..780 | 100 | <- | Minus |
| 3R | 11962557..11962713 | 16..172 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:33:25 Download gff for
BS01185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7787618..7788225 | 173..780 | 100 | <- | Minus |
| arm_3R | 7788279..7788435 | 16..172 | 100 | | Minus |
BS01185.complete Sequence
1651 bp (1651 high quality bases) assembled on 2005-06-23
> BS01185.complete
GAAGTTATCAGTCGACATGGACACACCGGAGATCCACGTAAATATAAGCT
CGCAGACTTGCCGCGTCTGCCTGGAGACGCACGAGACCAATCTGTATGTC
CACGATGAAATCAAATACAACGACCTTAAGTTGGAGCTCTGGCAGTTGTT
GGAGGCAGTTTCCAAATTGAAGTGGACATGGACGGACCCAAATCTGCCTA
TGCATCTGTGTCAAAATTGCGCCCGCCGGCTGATCGGCGCCTATGAGTTC
ATCGTCGAAGTGGAAAACGCCCATGAAACTTTACAGAATCTCTTCGAGCA
ACAGGAAGTTGCTGCCAAGCCGGATGAAGTTCATGTGGATGTCGTGGAGC
TTATAGACCAAGACGATGTGGTCAGTATGGCACAATACCTGTCCACGTCT
TTTGCCGAACAGCACGTGGAAATGGAGGAGAAGTATGGAGACCAAGACTG
TTCAGCTTTTACTTCAGATGTGGGCGAAGAGCCACTCTATGCGAGCGAGG
ATCGTGATGATGAGCCTGAAGACTCCTTTCAGCTGAAGCCTCGGCCAGAT
GAAATAGAAAACAGAGAATTGTCGCGACCTTCCCAGCTGGGCAGTCGTTT
GAACCATTCGGCGAACTTCATCTACAAGTGCGCCGTCTGTCCGCGTGTCT
TTGCCAAAAGTGAATCTCTGACTCGTCATTTTTCCCAAGCCCACAAACTG
ACAGCGGACGTGGCCGCCATGAAGCTGGCCAACGAGAGCTGCGGCACCGG
TCTGCTAACCTGTGAGCACTGTCCGCGGACATTCAAGCGTCAGGACACAC
TCCGGCGACACATGCAGGCATTCCATCCCGACGCAATCGCATTGGAACCC
GAAGAAACGACGGACAATTCCGCCCGAAAACGCATAGCTAAGCGGCGAGA
CTGTCCGCACTGTGGCCTGAGCTTTCCCGTATCTAGCCTTACCATCCACA
TTCGGCGACATACGGGCGATAATCCGTACAAGTGCGATCAATGCGAGAAG
GCCTTTCCGCGCAGCCAAGATCTTAGTCTTCACATGCGTCAGCACACCGG
CGAGCGTCCCAGTGAGTGCAAGATCTGCTCCAAGAAGTTTATTTCGCAGA
ACAAGCTGGCGCGACACATGCGATTGCACACGGGTCAAAGGCCGTACTCC
TGCAAAATGTGCAGCAAGAGCTTTGTGCAGTCCAACGACCTTAAGATCCA
TATGCGGCGCCACACGGGCGAGCGACCATATCAGTGTGGAGTGTGCGGCG
AGAGCTTTGTGTGCGGTTCGCACCTGAATATCCATCGTAACCGAAAGGGA
CATCTGATTGCTGTGATTCCGGGCAATGAAGTAGAGGCAAATTTTGCTGC
TGATCCTTATGTAAATGCTAGGGTCAACCAGCGCCGTTCGGAGGATATAG
AGCGTATGCGCCTGCAACGCATTCCCGAAAACCAATTGCAACAGAGACTG
GAAAATCTCCCCAAACCGGATGTCCCGGCTATGTGCTACAAATGCGGTGT
CTGCGAACAGAAATTCAAAAGTGGAGCTCTCCTGACCGTCCATCGCAATA
AAATGAGCCATTATGAGATCGAAAGGGTCTACGAAAATCCGTTCGGAAAA
AATCAGAAAATCATCAAAGCCGAATATAATTAACGAAGCTTTCTAGACCA
T
BS01185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-RA | 1617 | CG3281-PA | 1..1617 | 17..1633 | 8085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-RA | 1870 | CG3281-RA | 93..1710 | 16..1633 | 8090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11961043..11962505 | 1633..171 | 7315 | 100 | Minus |
| 3R | 32079331 | 3R | 11962557..11962713 | 172..16 | 785 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:32:05 has no hits.
BS01185.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:29 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 1..1617 | 17..1633 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:31 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 89..1708 | 16..1637 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:03:18 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 94..1710 | 17..1635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:29 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 89..1708 | 16..1637 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:21:22 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3281-RA | 94..1710 | 17..1635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:21:22 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11961041..11962503 | 173..1635 | 99 | <- | Minus |
| 3R | 11962557..11962712 | 17..172 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:03:18 Download gff for
BS01185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7786763..7788225 | 173..1635 | 99 | <- | Minus |
| arm_3R | 7788279..7788434 | 17..172 | 100 | | Minus |
BS01185.pep Sequence
Translation from 16 to 1632
> BS01185.pep
MDTPEIHVNISSQTCRVCLETHETNLYVHDEIKYNDLKLELWQLLEAVSK
LKWTWTDPNLPMHLCQNCARRLIGAYEFIVEVENAHETLQNLFEQQEVAA
KPDEVHVDVVELIDQDDVVSMAQYLSTSFAEQHVEMEEKYGDQDCSAFTS
DVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLNHSAN
FIYKCAVCPRVFAKSESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCE
HCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRIAKRRDCPHCG
LSFPVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHTGERPSE
CKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHT
GERPYQCGVCGESFVCGSHLNIHRNRKGHLIAVIPGNEVEANFAADPYVN
ARVNQRRSEDIERMRLQRIPENQLQQRLENLPKPDVPAMCYKCGVCEQKF
KSGALLTVHRNKMSHYEIERVYENPFGKNQKIIKAEYN*
BS01185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3281-PA | 538 | CG3281-PA | 1..538 | 1..538 | 2898 | 100 | Plus |
| CG11902-PB | 1426 | CG11902-PB | 1173..1405 | 203..429 | 519 | 44 | Plus |
| CG18476-PA | 936 | CG18476-PA | 696..930 | 203..441 | 447 | 37.3 | Plus |
| CG2202-PA | 889 | CG2202-PA | 429..747 | 137..415 | 422 | 35.8 | Plus |
| CG7372-PA | 971 | CG7372-PA | 627..867 | 245..478 | 383 | 32.2 | Plus |
| CG2202-PA | 889 | CG2202-PA | 476..647 | 249..426 | 246 | 32.8 | Plus |
| CG18476-PA | 936 | CG18476-PA | 7..447 | 15..423 | 182 | 22 | Plus |
