Clone BS01193 Report

Search the DGRC for BS01193

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:11
Well:93
Vector:pDNR-Dual
Associated Gene/Transcriptash2-RC
Protein status:BS01193.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01193.3prime Sequence

902 bp (814 high quality bases) assembled on 2005-11-30

> BS01193.3prime
ATGGTCTAGAAAGCTTCGCTAAAGACCCATATTATCCAAGCGCAGACGTC
CATCGTGTTCTGTGAGGTAGAGGGTGTCGGCTAAACATTGCTCTGTGATC
AGCTCCTCCACGCGATCGTGCATCCCCTTGGCTTTGTGCTCGACGAGCAC
CTCGGGATACTTGAAGGCGGGTCCGAAGTTTACGCTGACCGTTGCACTTT
TGTGGATCGAGATGGCCGGGAAATAGCTGCCGGCATAAATGTCTTCGAAT
GCCACACCCTGCGATTGACCGTTCTTAAAGAACTCGATGCGGCTGCCCTG
CAGGATGTGCAGATTTTTCAGGGTTTCTGTGATCTTGTCCTTATCCTCGT
AGTACAGATGAGACTTGAACTTGACCAGGGGCCGATCTTTGAATGTGTTG
GGCAGATAGTCGAGCGACGCCTCCTCTGGCAGCTCTATGAGGAATCCCAA
TGTATCGCCCTCCACATAGGCATCACTGTAGTGTTTGCCATGGCTCTCGG
TAAACTTGGTGCCCTTGCGAGATCTCCAGGAGTAACCGAACTTGTCGTAT
CCCAATGGAGCCTGCAAGTTGCCGTACTCCCGGCCCCAGCCAAGTCGCGT
GGCAGCTCCGTCGGGCATCTCTTCGATGGTGACCTCAAAGTACCAGCATC
CCCGGTTCACAGAGTGTGTGGCTCGGACCATGCAGTAACCACGTTCGCCC
GTCACCGCCAACCGATCCTCGCTTATTTTCAGCTGTGGTGCCCGATCATG
CAGCGCCAGGAGCACAGAATGTGGCACCAGGATGCGGTAGAGCCAGCCGG
GGATAGGTTTGCCAGCCCAATCGGAGCTCTCGTCGAACTCCTGACGAAAT
GGAGCATGTGGATCCGGTTCGGCAAGTATATAACGATAGCCATCCTTGTT
TG

BS01193.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG6677-PA 1872 ash2-RA 991..1872 900..19 4385 99.8 Minus
CG6677-PB 1053 ash2-RB 172..1053 900..19 4385 99.8 Minus
CG6677-PC 1671 ash2-RC 790..1671 900..19 4385 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:04:56
Subject Length Description Subject Range Query Range Score Percent Strand
ash2-RE 1271 CG6677-RE 216..1097 900..19 4395 99.9 Minus
ash2-RC 1949 CG6677-RC 894..1775 900..19 4395 99.9 Minus
ash2-RB 1413 CG6677-RB 358..1239 900..19 4395 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 12:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24652310..24652590 662..382 1405 100 Minus
3R 32079331 3R 24652781..24653039 382..124 1295 100 Minus
3R 32079331 3R 24652004..24652241 900..663 1175 99.6 Minus
3R 32079331 3R 24653097..24653202 124..19 530 100 Minus
Blast to na_te.dros performed on 2015-02-11 12:04:54 has no hits.

BS01193.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:03:17 Download gff for BS01193.3prime
Subject Subject Range Query Range Percent Splice Strand
ash2-PB 171..1053 19..902 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:10:58 Download gff for BS01193.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6677-PC 789..1671 19..902 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 21:40:14 Download gff for BS01193.3prime
Subject Subject Range Query Range Percent Splice Strand
ash2-RB 357..1239 19..902 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:23:58 Download gff for BS01193.3prime
Subject Subject Range Query Range Percent Splice Strand
ash2-RB 357..1239 19..902 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:23:58 Download gff for BS01193.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24652003..24652241 663..902 99 -> Minus
3R 24652310..24652590 382..662 100 -> Minus
3R 24652782..24653039 124..381 100 -> Minus
3R 24653098..24653202 19..123 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 21:40:14 Download gff for BS01193.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20477725..20477963 663..902 99 -> Minus
arm_3R 20478032..20478312 382..662 100 -> Minus
arm_3R 20478504..20478761 124..381 100 -> Minus
arm_3R 20478820..20478924 19..123 100   Minus

BS01193.5prime Sequence

866 bp (830 high quality bases) assembled on 2005-11-30

> BS01193.5prime
GAAGTTATCAGTCGACATGGAGGACAGCCAAATGGACACAAGCTCGCCGA
CAGAGTCCAGCTCCGAGGTGAACTTCACTGCGGAGGAGGATAAATCGCAG
GAAACGCGTTCCGCAGCCGGCGTTTGTTACTGCGGCAAGGAGCGCAATCT
CAATATTGTGGAGCTGCTGTGTGCCACCTGTTCACGCTGGGTGCACGAGA
CCTGCGTTTCCTACCAGCTTGGTAAGGGTAAACTTCTGCCCTTCATCACC
AACTATGTGTTCGTCTGTAAAAATTGCTCTGCCAGCGGATTGGAGAGCTT
TCGCAAGAGCCAGGCTACCATATCCCAGATGTGCCACTGTGCCATTGCCA
ACATGCAGCAGGCGGCTTCCAGGGACGGACGTCGCCAGATTCAGTTTAGC
AAGGACAAGGAGATCATACCGTACATCGAACAGTACTGGGAGGCCATGAC
CACCATGCCACGCAGACTCACCCAGTCCTGGTACAGCACCGTCCAGCGAT
CTTTGGTCAAGGATGTGCAGACCCTGTTCACCTACGAGGAGCATGCGGAA
CATGGCGCCATGTACGGACTATTCCATCAGGATCTGCGAATCATCAAGCC
CAACTACGAGAGCATGAGCAAGAGCGGCGCCCTGCGACTCACCGACGATG
GATATACTCAAGCTTCCCTCTCCAAAAACAATCGACAGAAAAGGAAATTT
CCCGGCACGGATTCGGGTCCCACGGGCAAGAAGGGTCGGCCCAGTTCCGA
TATTACGGCCAATGTAAAGTTGCCACCGCATGGCTATCCATTGGAACACC
CCTTCAACAAGGATGGCTATCGTTATATACTCGCCGAACCGGATCCACAT
GCTCCATTTCGTCAGG

BS01193.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:46:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG6677-PC 1671 ash2-RC 1..850 17..866 4250 100 Plus
CG6677-PA 1872 ash2-RA 208..1051 23..866 4220 100 Plus
CG6677-PB 1053 ash2-RB 29..232 663..866 1020 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:02:18
Subject Length Description Subject Range Query Range Score Percent Strand
ash2-RC 1949 CG6677-RC 105..954 17..866 4250 100 Plus
ash2-RE 1271 CG6677-RE 73..276 663..866 1020 100 Plus
ash2-RB 1413 CG6677-RB 215..418 663..866 1020 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:02:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24650650..24650994 318..662 1725 100 Plus
3R 32079331 3R 24651859..24652064 661..866 1030 100 Plus
3R 32079331 3R 24650404..24650589 132..317 930 100 Plus
3R 32079331 3R 24650229..24650344 17..132 580 100 Plus
Blast to na_te.dros performed on 2015-02-10 03:02:14 has no hits.

BS01193.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:03:18 Download gff for BS01193.5prime
Subject Subject Range Query Range Percent Splice Strand
ash2-PC 1..850 17..866 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:11:00 Download gff for BS01193.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6677-PC 1..850 17..866 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:44:31 Download gff for BS01193.5prime
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 94..954 5..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:12:53 Download gff for BS01193.5prime
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 94..954 5..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:12:53 Download gff for BS01193.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24650650..24650994 318..662 100 -> Plus
3R 24650218..24650344 5..132 96 -> Plus
3R 24650405..24650589 133..317 100 -> Plus
3R 24651861..24652064 663..866 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:44:31 Download gff for BS01193.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20475940..20476066 5..132 96 -> Plus
arm_3R 20476127..20476311 133..317 100 -> Plus
arm_3R 20476372..20476716 318..662 100 -> Plus
arm_3R 20477583..20477786 663..866 100   Plus

BS01193.complete Sequence

1705 bp (1705 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634559

> BS01193.complete
GAAGTTATCAGTCGACATGGAGGACAGCCAAATGGACACAAGCTCGCCGA
CAGAGTCCAGCTCCGAGGTGAACTTCACTGCGGAGGAGGATAAATCGCAG
GAAACGCGTTCCGCAGCCGGCGTTTGTTACTGCGGCAAGGAGCGCAATCT
CAATATTGTGGAGCTGCTGTGTGCCACCTGTTCACGCTGGGTGCACGAGA
CCTGCGTTTCCTACCAGCTTGGTAAGGGTAAACTTCTGCCCTTCATCACC
AACTATGTGTTCGTCTGTAAAAATTGCTCTGCCAGCGGATTGGAGAGCTT
TCGCAAGAGCCAGGCTACCATATCCCAGATGTGCCACTGTGCCATTGCCA
ACATGCAGCAGGCGGCTTCCAGGGACGGACGTCGCCAGATTCAGTTTAGC
AAGGACAAGGAGATCATACCGTACATCGAACAGTACTGGGAGGCCATGAC
CACCATGCCACGCAGACTCACCCAGTCCTGGTACAGCACCGTCCAGCGAT
CTTTGGTCAAGGATGTGCAGACCCTGTTCACCTACGAGGAGCATGCGGAA
CATGGCGCCATGTACGGACTATTCCATCAGGATCTGCGAATCATCAAGCC
CAACTACGAGAGCATGAGCAAGAGCGGCGCCCTGCGACTCACCGACGATG
GATATACTCAAGCTTCCCTCTCCAAAAACAATCGACAGAAAAGGAAATTT
CCCGGCACGGATTCGGGTCCCACGGGCAAGAAGGGTCGGCCCAGTTCCGA
TATTACGGCCAATGTAAAGTTGCCACCGCATGGCTATCCATTGGAACACC
CCTTCAACAAGGATGGCTATCGTTATATACTCGCCGAACCGGATCCACAT
GCTCCATTTCGTCAGGAGTTCGACGAGAGCTCCGATTGGGCTGGCAAACC
TATCCCCGGCTGGCTCTACCGCATCCTGGTGCCACATTCTGTGCTCCTGG
CGCTGCATGATCGGGCACCACAGCTGAAAATAAGCGAGGATCGGTTGGCG
GTGACGGGCGAACGTGGTTACTGCATGGTCCGAGCCACACACTCTGTGAA
CCGGGGATGCTGGTACTTTGAGGTCACCATCGAAGAGATGCCCGACGGAG
CTGCCACGCGACTTGGCTGGGGCCGGGAGTACGGCAACTTGCAGGCTCCA
TTGGGATACGACAAGTTCGGTTACTCCTGGAGATCTCGCAAGGGCACCAA
GTTTACCGAGAGCCATGGCAAACACTACAGTGATGCCTATGTGGAGGGCG
ATACATTGGGATTCCTCATAGAGCTGCCAGAGGAGGCGTCGCTCGACTAT
CTGCCCAACACATTCAAAGATCGGCCCCTGGTCAAGTTCAAGTCTCATCT
GTACTACGAGGATAAGGACAAGATCACAGAAACCCTGAAAAATCTGCACA
TCCTGCAGGGCAGCCGCATCGAGTTCTTTAAGAACGGTCAATCGCAGGGT
GTGGCATTCGAAGACATTTATGCCGGCAGCTATTTCCCGGCCATCTCGAT
CCACAAAAGTGCAACGGTCAGCGTAAACTTCGGACCCGCCTTCAAGTATC
CCGAGGTGCTCGTCGAGCACAAAGCCAAGGGGATGCACGATCGCGTGGAG
GAGCTGATCACAGAGCAATGTTTAGCCGACACCCTCTACCTCACAGAACA
CGATGGACGTCTGCGCTTGGATAATATGGGTCTTTAGCGAAGCTTTCTAG
ACCAT

BS01193.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:50:37
Subject Length Description Subject Range Query Range Score Percent Strand
ash2-RC 1671 CG6677-PC 1..1671 17..1687 8355 100 Plus
ash2-RB 1053 CG6677-PB 29..1053 663..1687 5125 100 Plus
ash2-RE 663 CG6677-PE 1..663 1025..1687 3315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
ash2-RC 1949 CG6677-RC 105..1775 17..1687 8355 100 Plus
ash2-RE 1271 CG6677-RE 73..1097 663..1687 5125 100 Plus
ash2-RB 1413 CG6677-RB 215..1239 663..1687 5125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24651859..24652241 661..1043 1915 100 Plus
3R 32079331 3R 24650650..24650994 318..662 1725 100 Plus
3R 32079331 3R 24652310..24652590 1044..1324 1405 100 Plus
3R 32079331 3R 24652781..24653039 1324..1582 1295 100 Plus
3R 32079331 3R 24650404..24650589 132..317 930 100 Plus
3R 32079331 3R 24650229..24650344 17..132 580 100 Plus
3R 32079331 3R 24653097..24653202 1582..1687 530 100 Plus
Blast to na_te.dros performed on 2014-11-27 23:50:35 has no hits.

BS01193.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:17 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 1..1671 17..1687 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:16 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 131..1812 5..1687 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:39:36 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 105..1777 17..1689 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:17 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 131..1812 5..1687 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:29 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
ash2-RC 105..1777 17..1689 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:09:29 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24650405..24650589 133..317 100 -> Plus
3R 24650229..24650344 17..132 100 -> Plus
3R 24650650..24650994 318..662 100 -> Plus
3R 24651861..24652241 663..1043 100 -> Plus
3R 24652310..24652590 1044..1324 100 -> Plus
3R 24652782..24653039 1325..1582 100 -> Plus
3R 24653098..24653204 1583..1689 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:39:36 Download gff for BS01193.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20475951..20476066 17..132 100 -> Plus
arm_3R 20476127..20476311 133..317 100 -> Plus
arm_3R 20476372..20476716 318..662 100 -> Plus
arm_3R 20477583..20477963 663..1043 100 -> Plus
arm_3R 20478032..20478312 1044..1324 100 -> Plus
arm_3R 20478504..20478761 1325..1582 100 -> Plus
arm_3R 20478820..20478926 1583..1689 99   Plus

BS01193.pep Sequence

Translation from 16 to 1686

> BS01193.pep
MEDSQMDTSSPTESSSEVNFTAEEDKSQETRSAAGVCYCGKERNLNIVEL
LCATCSRWVHETCVSYQLGKGKLLPFITNYVFVCKNCSASGLESFRKSQA
TISQMCHCAIANMQQAASRDGRRQIQFSKDKEIIPYIEQYWEAMTTMPRR
LTQSWYSTVQRSLVKDVQTLFTYEEHAEHGAMYGLFHQDLRIIKPNYESM
SKSGALRLTDDGYTQASLSKNNRQKRKFPGTDSGPTGKKGRPSSDITANV
KLPPHGYPLEHPFNKDGYRYILAEPDPHAPFRQEFDESSDWAGKPIPGWL
YRILVPHSVLLALHDRAPQLKISEDRLAVTGERGYCMVRATHSVNRGCWY
FEVTIEEMPDGAATRLGWGREYGNLQAPLGYDKFGYSWRSRKGTKFTESH
GKHYSDAYVEGDTLGFLIELPEEASLDYLPNTFKDRPLVKFKSHLYYEDK
DKITETLKNLHILQGSRIEFFKNGQSQGVAFEDIYAGSYFPAISIHKSAT
VSVNFGPAFKYPEVLVEHKAKGMHDRVEELITEQCLADTLYLTEHDGRLR
LDNMGL*

BS01193.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
ash2-PC 556 CG6677-PC 1..556 1..556 2978 100 Plus
ash2-PB 350 CG6677-PB 9..350 215..556 1841 99.4 Plus
ash2-PE 220 CG6677-PE 1..220 337..556 1179 100 Plus