Clone Sequence Records
BS01205.3prime Sequence
812 bp (806 high quality bases) assembled on 2005-11-29
> BS01205.3prime
ATGGTCTAGAAAGCTTTTAGACGGAAATCGGCGCATTCGTGGCCGCCGGC
GATTGCTGTTGCGGCTGCTGTTGGTGGTGCTGATGGTGATGATGGTGGTG
GTGACCCATGTGGTGATGACCCAGATGATGGTGCTGCTCCTGATGGTGGT
GGCTCAGGGTCAGATGATGATGCTGCTCCTGCTGGTGTTGCTGCTGCAGC
TGGTGATGGTGGTTGTATTGCTGGTGCTGTGTCTTCAGCAGCATGGAGCG
GTACATTTCGGAGAGGAGACTCCACATGGGCGGCGAGTCCTTGGCCAGAT
CCACGGGTGATCCCGCCGGCAGGAAGGCGGTGGGCGGTGCCTGGCTGGTG
GCAGCGGCAGCCGCTGCGGCGGCAAACATCTGGGTCTGCAGCAGGCGCAG
ATGATGATGCTCCTCGAGGTCCAGAACGGGCAGTGGGAGCATTTGCCGCC
GGCTGGTCATGTAGGCACTGTCGCTATCCGGGTCCAGATCCATTTTGATG
CTCGTCTGTGGTGGATTGGCGCTAGCGCTGGCGGAGGAACTAGAGGCGGA
GGAGGCGGCTGCCGTGGAACAGGCGGAGCTGGAGGCGGTGCTGTCGTGAC
GCTTACGCTTGCCCAGCAACTGATCCATGGAGAAGGCATCGCTGGGCGAG
CGCTTCTCACGCTCCAGCTCATGCTCCTGTTCGGGTTCGTGCTCCTTGTC
GGATTCCACATCCTGTTCCTGCTCCTTTTCCGCCTCCCGCTCCCGTTCCT
GCTCCTGCTCCTGCTCCTGTTCCCGATCCTGCTCCGACTTGCGACGCTTG
TGAAGGCTGAAA
BS01205.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:47:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9908-PA | 1707 | disco-RA | 912..1707 | 812..17 | 3980 | 100 | Minus |
| CG9908-PB | 1707 | disco-RB | 912..1707 | 812..17 | 3980 | 100 | Minus |
| CG15470-PA | 1038 | CG15470-RA | 715..749 | 205..171 | 150 | 97.1 | Minus |
| CG15772-PA | 780 | CG15772-RA | 250..287 | 205..168 | 140 | 94.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:09:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| disco-RB | 3067 | CG9908-RB | 1474..2269 | 812..17 | 3980 | 100 | Minus |
| disco-RA | 3247 | CG9908-RA | 1478..2273 | 812..17 | 3980 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16211572..16212367 | 17..812 | 3980 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:09:37 has no hits.
BS01205.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:03:26 Download gff for
BS01205.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9908-PA | 915..1707 | 17..809 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:11:10 Download gff for
BS01205.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9908-PB | 915..1707 | 17..809 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 04:16:33 Download gff for
BS01205.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RA | 1476..2268 | 17..809 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:47:43 Download gff for
BS01205.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RA | 1481..2273 | 17..809 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:47:43 Download gff for
BS01205.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16211572..16212364 | 17..809 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 04:16:33 Download gff for
BS01205.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16105605..16106397 | 17..809 | 100 | | Plus |
BS01205.5prime Sequence
811 bp (740 high quality bases) assembled on 2005-11-29
> BS01205.5prime
GAAGTTATCAGTCGACATGGAGCACATAATGAATCCGTTCATGTCACCGG
CTTATCTGCTGGGCCATGGCCCACATTCCCACCAGCATGTGCACTCCCAT
CTACCGTCACACCCGCAGCCAAATGCCGCCTCTCCGGCCAGCTCACCCGG
CGGATCCAGTGGCTCTGGATCGGGATCGGCAGCGGGATCGGGCACTGGAT
CAGGTTCATCCTTAAAGCCTCGTCGCTGGGGCTCACCGCCCATCAATCTG
GCCGGTCAGTTTATCAATCCAGCCACGGGAAAGAAACGAGTACAGTGCTC
CATTTGCTTCAAGACCTTCTGCGACAAGGGCGCCCTTAAGATTCACTTTT
CGGCCGTGCATCTTCGCGAGATGCACAAGTGCACGGTGGAGGGCTGCAAT
ATGGTGTTCAGTTCGAGGCGTTCGAGGAATCGCCATAGCGCCAATCCGAA
TCCCAAACTCCATTCGCCACACATCCGGCGCAAGATCTCGCCGCACGATG
GCCGCACTGCCCAGCAGTTTCCGGTTTTCTCGCCCGGAACAGCCGCAGCA
GCGGCCGCTGTCGCCGGACGACTTCCGGTTGCCTTTCCCGGACTTCTGCC
ACCGCCGCCGCCGCATCATGGTCACCATCCGTACGTCATGTTCGGCGGAC
AGGCGGGTCTACATGGCTTGGGCCTGCTTTCCACCGGCTGTCAGGATCCC
GATTCTGGATCGGTGGACAATGAACAGGATGCTGATCCCGAAGATGACAA
CGACTTTGTGTACGTGGACATGCANGCCAATAGCTCTAGTCCGGCGGCCT
CCAGCGAGGAT
BS01205.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:47:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9908-PA | 1707 | disco-RA | 1..795 | 17..811 | 3956 | 99.8 | Plus |
| CG9908-PB | 1707 | disco-RB | 1..795 | 17..811 | 3956 | 99.8 | Plus |
| CG32577-PA | 3936 | disco-r-RA | 1546..1601 | 413..468 | 205 | 94.6 | Plus |
| CG32577-PA | 3936 | disco-r-RA | 1444..1496 | 311..363 | 140 | 90.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:20:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| disco-RB | 3067 | CG9908-RB | 555..1357 | 9..811 | 3989 | 99.8 | Plus |
| disco-RA | 3247 | CG9908-RA | 559..1361 | 9..811 | 3989 | 99.8 | Plus |
| disco-r-RD | 4485 | CG32577-RD | 1676..1929 | 257..510 | 655 | 83.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16212484..16213286 | 811..9 | 3989 | 99.8 | Minus |
| X | 23542271 | X | 16121552..16121805 | 510..257 | 655 | 83.9 | Minus |
Blast to na_te.dros performed on 2015-02-13 08:20:24 has no hits.
BS01205.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:03:27 Download gff for
BS01205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9908-PA | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:11:11 Download gff for
BS01205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9908-PB | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:36:01 Download gff for
BS01205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RA | 554..1356 | 9..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:11:48 Download gff for
BS01205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RA | 559..1361 | 9..811 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:11:48 Download gff for
BS01205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16212484..16213286 | 9..811 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:36:01 Download gff for
BS01205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16106517..16107319 | 9..811 | 99 | | Minus |
BS01205.complete Sequence
1739 bp (1739 high quality bases) assembled on 2006-03-24
GenBank Submission: FJ634560
> BS01205.complete
GAAGTTATCAGTCGACATGGAGCACATAATGAATCCGTTCATGTCACCGG
CTTATCTGCTGGGCCATGGCCCACATTCCCACCAGCATGTGCACTCCCAT
CTACCGTCACACCCGCAGCCAAATGCCGCCTCTCCGGCCAGCTCACCCGG
CGGATCCAGTGGCTCTGGATCGGGATCGGCAGCGGGATCGGGCACTGGAT
CAGGTTCATCCTTAAAGCCTCGTCGCTGGGGCTCACCGCCCATCAATCTG
GCCGGTCAGTTTATCAATCCAGCCACGGGAAAGAAACGAGTACAGTGCTC
CATTTGCTTCAAGACCTTCTGCGACAAGGGCGCCCTTAAGATTCACTTTT
CGGCCGTGCATCTTCGCGAGATGCACAAGTGCACGGTGGAGGGCTGCAAT
ATGGTGTTCAGTTCGAGGCGTTCGAGGAATCGCCATAGCGCCAATCCGAA
TCCCAAACTCCATTCGCCACACATCCGGCGCAAGATCTCGCCGCACGATG
GCCGCACTGCCCAGCAGTTTCCGGTTTTCTCGCCCGGAACAGCCGCAGCA
GCGGCCGCTGTCGCCGGACGACTTCCGGTTGCCTTTCCCGGACTTCTGCC
ACCGCCGCCGCCGCATCATGGTCACCATCCGTACGTCATGTTCGGCGGAC
AGGCGGGTCTACATGGCTTGGGCCTGCTTTCCACCGGCTGTCAGGATCCC
GATTCTGGATCGGTGGACAATGAACAGGATGCTGATCCCGAAGATGACAA
CGACTTTGTGTACGTGGACATGCAGGCCAATAGCTCTAGTCCGGCGGCCT
CCAGCGAGGATCAGGAGGAACACGAACGGGATAATGAGCAGGATGAGGAG
ATGCACTGCAGCTTGAGCCTGGCCAGCAGTAGTAGCATTGCCGCCGATGA
GGAGCGGGCAGCTGACCAGCCATTGGATTTCAGCCTTCACAAGCGTCGCA
AGTCGGAGCAGGATCGGGAACAGGAGCAGGAGCAGGAGCAGGAACGGGAG
CGGGAGGCGGAAAAGGAGCAGGAACAGGATGTGGAATCCGACAAGGAGCA
CGAACCCGAACAGGAGCATGAGCTGGAGCGTGAGAAGCGCTCGCCCAGCG
ATGCCTTCTCCATGGATCAGTTGCTGGGCAAGCGTAAGCGTCACGACAGC
ACCGCCTCCAGCTCCGCCTGTTCCACGGCAGCCGCCTCCTCCGCCTCTAG
TTCCTCCGCCAGCGCTAGCGCCAATCCACCACAGACGAGCATCAAAATGG
ATCTGGACCCGGATAGCGACAGTGCCTACATGACCAGCCGGCGGCAAATG
CTCCCACTGCCCGTTCTGGACCTCGAGGAGCATCATCATCTGCGCCTGCT
GCAGACCCAGATGTTTGCCGCCGCAGCGGCTGCCGCTGCCACCAGCCAGG
CACCGCCCACCGCCTTCCTGCCGGCGGGATCACCCGTGGATCTGGCCAAG
GACTCGCCGCCCATGTGGAGTCTCCTCTCCGAAATGTACCGCTCCATGCT
GCTGAAGACACAGCACCAGCAATACAACCACCATCACCAGCTGCAGCAGC
AACACCAGCAGGAGCAGCATCATCATCTGACCCTGAGCCACCACCATCAG
GAGCAGCACCATCATCTGGGTCATCACCACATGGGTCACCACCACCATCA
TCACCATCAGCACCACCAACAGCAGCCGCAACAGCAATCGCCGGCGGCCA
CGAATGCGCCGATTTCCGTCTAAAAGCTTTCTAGACCAT
BS01205.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| disco-RB | 1707 | CG9908-PB | 1..1707 | 17..1723 | 8535 | 100 | Plus |
| disco-RA | 1707 | CG9908-PA | 1..1707 | 17..1723 | 8535 | 100 | Plus |
| disco-r-RD | 3936 | CG32577-PD | 1390..1643 | 257..510 | 655 | 83.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| disco-RB | 3067 | CG9908-RB | 555..2269 | 9..1723 | 8560 | 99.9 | Plus |
| disco-RA | 3247 | CG9908-RA | 559..2273 | 9..1723 | 8560 | 99.9 | Plus |
| disco-r-RD | 4485 | CG32577-RD | 1676..1929 | 257..510 | 655 | 83.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16211572..16213286 | 1723..9 | 8560 | 99.9 | Minus |
| X | 23542271 | X | 16121552..16121805 | 510..257 | 655 | 83.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:06:54 has no hits.
BS01205.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:40:39 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RB | 1..1707 | 17..1723 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:26:51 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RB | 515..2229 | 9..1723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:38 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RA | 562..2266 | 17..1721 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:40:39 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RB | 515..2229 | 9..1723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:18 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| disco-RA | 567..2271 | 17..1721 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:18 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16211574..16213278 | 17..1721 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:38 Download gff for
BS01205.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16105607..16107311 | 17..1721 | 100 | | Minus |
BS01205.pep Sequence
Translation from 16 to 1722
> BS01205.pep
MEHIMNPFMSPAYLLGHGPHSHQHVHSHLPSHPQPNAASPASSPGGSSGS
GSGSAAGSGTGSGSSLKPRRWGSPPINLAGQFINPATGKKRVQCSICFKT
FCDKGALKIHFSAVHLREMHKCTVEGCNMVFSSRRSRNRHSANPNPKLHS
PHIRRKISPHDGRTAQQFPVFSPGTAAAAAAVAGRLPVAFPGLLPPPPPH
HGHHPYVMFGGQAGLHGLGLLSTGCQDPDSGSVDNEQDADPEDDNDFVYV
DMQANSSSPAASSEDQEEHERDNEQDEEMHCSLSLASSSSIAADEERAAD
QPLDFSLHKRRKSEQDREQEQEQEQEREREAEKEQEQDVESDKEHEPEQE
HELEREKRSPSDAFSMDQLLGKRKRHDSTASSSACSTAAASSASSSSASA
SANPPQTSIKMDLDPDSDSAYMTSRRQMLPLPVLDLEEHHHLRLLQTQMF
AAAAAAAATSQAPPTAFLPAGSPVDLAKDSPPMWSLLSEMYRSMLLKTQH
QQYNHHHQLQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHHHHHQHH
QQQPQQQSPAATNAPISV*
BS01205.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:51:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| disco-PB | 568 | CG9908-PB | 1..568 | 1..568 | 3050 | 100 | Plus |
| disco-PA | 568 | CG9908-PA | 1..568 | 1..568 | 3050 | 100 | Plus |
| disco-r-PD | 1311 | CG32577-PD | 432..855 | 43..517 | 602 | 34.4 | Plus |
| disco-r-PC | 1311 | CG32577-PC | 432..855 | 43..517 | 602 | 34.4 | Plus |
| disco-r-PB | 1311 | CG32577-PB | 432..855 | 43..517 | 602 | 34.4 | Plus |
