Clone Sequence Records
BS01296.3prime Sequence
865 bp (806 high quality bases) assembled on 2005-11-29
> BS01296.3prime
ATGGTCTAGAAAGCTTTCAAACAATTTCCATTTCACGCTCTATGCCCACG
AACTTCAGCTGCTCCGTGGGTCCGTATCTGTAGTCAAAGAATAGCTCTTC
GCCGGGCTGAATGGCCCGCTTGGCAAAGATGCCGATGCGATGATCGCCGG
TGACCATCATAACCTTGGCATAGCAATTGGGATTAATGGAATGATTGGCA
AACCGAATCTTGTTGCCCTTCCGAGTGGCATCCACAACAAAATCGTTGTT
CAGATTGAAAAGAAATGAGCACATGTACTTGTCGTAAACCTTGCCACGGC
GATCGGCTTCATCTTGGGATATGATCTCGCCACAATATTCCGAAATGAAC
TCATTCTTTTGCGCACCCTCCTTAAGAAAGATGCCCCAGCCGGCGATGTC
AGACGGAGCCATGAGCAGGTGCTTGTGCAGTCCTCGCTGCACGCACACGT
TCTTGCACGTGATCTTGGTCAGCTTAAACTGATCCGCTCCGCAGGCCTGG
CACAGATCGGGATCACACTCGCGCACTGCCAGATAGCAAGGACACTGCTT
CGTATTGCACTGAGCCTTGCAGCGACAGCCGGGGAAACGATTCTGGCAAT
CGCTGCTGCAGTTGCAGAACTTTTCGCAGAAGTTTTGTGTCTGAATGCAG
GAGCAGTTCATGTCGCATGGATGTCCGGGATGGTCGCAGGGCGTGTAGTT
GTACACGTGATTCGAGGATGAGTCCTTCTTTAGCTGAATCTTACGACAGT
GCAGCGACCACAGACGTTGCTTCTTCTTCTTCTTGCGCGGAGGTGTGAAG
TCCTGTCGCAAATCCTCGAAGCTAAACTCAGCATCCTCCTTCTGGGGCAA
CTCGTACACCTGACG
BS01296.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:48:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6502-PA | 2283 | E(z)-RA | 1435..2283 | 865..17 | 4195 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 15:58:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RC | 2479 | CG6502-RC | 1568..2416 | 865..17 | 4215 | 99.8 | Minus |
E(z)-RB | 2464 | CG6502-RB | 1553..2401 | 865..17 | 4215 | 99.8 | Minus |
E(z)-RA | 2650 | CG6502-RA | 1739..2587 | 865..17 | 4215 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 15:57:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10635116..10635554 | 427..865 | 2165 | 99.5 | Plus |
3L | 28110227 | 3L | 10634638..10635047 | 17..426 | 2050 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-06 15:58:00 has no hits.
BS01296.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:05:58 Download gff for
BS01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-PA | 1435..2283 | 17..865 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:14:29 Download gff for
BS01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6502-PA | 1435..2283 | 17..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 10:18:40 Download gff for
BS01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 1739..2587 | 17..865 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 19:05:06 Download gff for
BS01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 1739..2587 | 17..865 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 19:05:06 Download gff for
BS01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10634638..10635047 | 17..426 | 100 | <- | Plus |
3L | 10635116..10635554 | 427..865 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 10:18:40 Download gff for
BS01296.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10627738..10628147 | 17..426 | 100 | <- | Plus |
arm_3L | 10628216..10628654 | 427..865 | 99 | | Plus |
BS01296.5prime Sequence
891 bp (789 high quality bases) assembled on 2005-11-29
> BS01296.5prime
GAAGTTATCAGTCGACATGAATAGCACTAAAGTGCCGCCCGAGTGGAAGA
GGCGTGTCAAGTCGGAGTACATCAAAATCAGGCAGCAGAAGCGCTACAAA
CGTGCCGACGAGATCAAGGAGGCGTGGATAAGAAACTGGGACGAGCACAA
CCACAATGTACAGGATCTGTACTGCGAGTCGAAGGTTTGGCAGGCTAAAC
CCTACGATCCGCCGCATGTGGACTGTGTGAAGCGGGCGGAGGTGACTAGC
TACAATGGCATTCCCAGCGGTCCGCAAAAGGTGCCCATTTGCGTGATCAA
CGCGGTCACTCCCATACCCACCATGTACACGTGGGCACCAACACAGCAGA
ACTTCATGGTGGAGGATGAGACGGTGCTGCACAATATACCCTATATGGGC
GACGAGGTCCTCGATAAGGATGGCAAGTTCATAGAGGAACTGATCAAAAA
CTACGATGGCAAGGTTCACGGCGACAAGGATCCCTCGTTCATGGACGATG
CCATCTTCGTAGAACTGGTGCACGCCCTTATGCGCTCCTACAGCAAGGAA
CTGGAGGAAGCCGCTCCGGGTACAGCGACTGCCATTAAAACAGAGACGTT
GGCGAAATCAAAACAGGGCGAAGATGATGGGGTAGTTGATGTTGACGCAG
ATGGTGAATCTCCCATGAAGCTTGAGAAAACCGACAGCAAAGGGGATCTG
ACTGAAGTTGAGAAGAAGGAAACTGAAGAACCGCTGGAGACTGAAGATGC
GGATGTTAAGCCCGATGTGGAAGAAGTCAAGGACAAGCTGCCCTTCCCTG
CGCCCATTATTTTTCAGGCCATCAGCGCTAACTTTCCAGACAAGGGCACC
GCGCNAGAGCTCAAAGAAAAGTACATTGAGCTTACGGAGCA
BS01296.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:48:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6502-PA | 2283 | E(z)-RA | 1..875 | 17..891 | 4356 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:44:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RC | 2479 | CG6502-RC | 119..993 | 17..891 | 4364 | 99.9 | Plus |
E(z)-RB | 2464 | CG6502-RB | 119..993 | 17..891 | 4364 | 99.9 | Plus |
E(z)-RA | 2650 | CG6502-RA | 305..1179 | 17..891 | 4364 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:44:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10636843..10637578 | 873..138 | 3669 | 99.9 | Minus |
3L | 28110227 | 3L | 10637639..10637761 | 139..17 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 02:44:25 has no hits.
BS01296.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:06:00 Download gff for
BS01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-PA | 1..874 | 17..890 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:14:30 Download gff for
BS01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6502-PA | 1..874 | 17..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:52:41 Download gff for
BS01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 298..1178 | 10..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:13:06 Download gff for
BS01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 298..1178 | 10..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:13:06 Download gff for
BS01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10636765..10636784 | 871..890 | 100 | <- | Minus |
3L | 10636846..10637577 | 139..870 | 99 | <- | Minus |
3L | 10637640..10637768 | 10..138 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:52:41 Download gff for
BS01296.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10629865..10629884 | 871..890 | 100 | <- | Minus |
arm_3L | 10629946..10630677 | 139..870 | 99 | <- | Minus |
arm_3L | 10630740..10630868 | 10..138 | 96 | | Minus |
BS01296.complete Sequence
2315 bp (2315 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634590
> BS01296.complete
GAAGTTATCAGTCGACATGAATAGCACTAAAGTGCCGCCCGAGTGGAAGA
GGCGTGTCAAGTCGGAGTACATCAAAATCAGGCAGCAGAAGCGCTACAAA
CGTGCCGACGAGATCAAGGAGGCGTGGATAAGAAACTGGGACGAGCACAA
CCACAATGTACAGGATCTGTACTGCGAGTCGAAGGTTTGGCAGGCTAAAC
CCTACGATCCGCCGCATGTGGACTGTGTGAAGCGGGCGGAGGTGACTAGC
TACAATGGCATTCCCAGCGGTCCGCAAAAGGTGCCCATTTGCGTGATCAA
CGCGGTCACTCCCATACCCACCATGTACACGTGGGCACCAACACAGCAGA
ACTTCATGGTGGAGGATGAGACGGTGCTGCACAATATACCCTATATGGGC
GACGAGGTCCTCGATAAGGATGGCAAGTTCATAGAGGAACTGATCAAAAA
CTACGATGGCAAGGTTCACGGCGACAAGGATCCCTCGTTCATGGACGATG
CCATCTTCGTAGAACTGGTGCACGCCCTTATGCGCTCCTACAGCAAGGAA
CTGGAGGAAGCCGCTCCGGGTACAGCGACTGCCATTAAAACAGAGACGTT
GGCGAAATCAAAACAGGGCGAAGATGATGGGGTAGTTGATGTTGACGCAG
ATGGTGAATCTCCCATGAAGCTTGAGAAAACCGACAGCAAAGGGGATCTG
ACTGAAGTTGAGAAGAAGGAAACTGAAGAACCGCTGGAGACTGAAGATGC
GGATGTTAAGCCCGATGTGGAAGAAGTCAAGGACAAGCTGCCCTTCCCTG
CGCCCATTATTTTTCAGGCCATCAGCGCTAACTTTCCAGACAAGGGCACC
GCGCAAGAGCTCAAAGAAAAGTACATTGAGCTTACGGAGCACCAGGATCC
GGAGCGCCCACAGGAGTGCACACCCAACATTGACGGCATCAAGGCCGAGA
GCGTTTCCCGGGAAAGGACTATGCACTCCTTTCACACGCTCTTCTGTCGT
CGTTGCTTCAAATACGACTGCTTCCTGCACCGCTTGCAAGGACATGCGGG
TCCCAATCTCCAGAAGCGTCGCTATCCGGAACTGAAGCCTTTCGCCGAAC
CTTGCAGCAACTCCTGCTACATGTTGATCGATGGCATGAAGGAAAAGCTG
GCGGCCGATAGCAAGACACCTCCCATTGATTCCTGCAATGAGGCCAGCTC
CGAGGACAGTAATGACAGCAACAGTCAGTTTAGCAACAAGGACTTTAATC
ATGAGAATAGCAAGGATAATGGCCTGACTGTAAATAGCGCCGCTGTGGCT
GAGATCAACTCCATTATGGCTGGCATGATGAACATCACCAGTACGCAGTG
CGTTTGGACAGGCGCTGACCAAGCACTTTATCGGGTCTTGCATAAAGTGT
ATTTAAAGAACTACTGCGCGATTGCGCACAACATGCTGACCAAGACCTGT
CGTCAGGTGTACGAGTTTGCCCAGAAGGAGGATGCTGAGTTTAGCTTCGA
GGATTTGCGACAGGACTTCACACCTCCGCGCAAGAAGAAGAAGAAGCAAC
GTCTGTGGTCGCTGCACTGTCGTAAGATTCAGCTAAAGAAGGACTCATCC
TCGAATCACGTGTACAACTACACGCCCTGCGACCATCCCGGACATCCATG
CGACATGAACTGCTCCTGCATTCAGACACAAAACTTCTGCGAAAAGTTCT
GCAACTGCAGCAGCGATTGCCAGAATCGTTTCCCCGGCTGTCGCTGCAAG
GCTCAGTGCAATACGAAGCAGTGTCCTTGCTATCTGGCAGTGCGCGAGTG
TGATCCCGATCTGTGCCAGGCCTGCGGAGCGGATCAGTTTAAGCTGACCA
AGATCACGTGCAAGAACGTGTGCGTGCAGCGAGGACTGCACAAGCACCTG
CTCATGGCTCCGTCTGACATCGCCGGCTGGGGCATCTTTCTTAAGGAGGG
TGCGCAAAAGAATGAGTTCATTTCGGAATATTGTGGCGAGATCATATCCC
AAGATGAAGCCGATCGCCGTGGCAAGGTTTACGACAAGTACATGTGCTCA
TTTCTTTTCAATCTGAACAACGATTTTGTTGTGGATGCCACTCGGAAGGG
CAACAAGATTCGGTTTGCCAATCATTCCATTAATCCCAATTGCTATGCCA
AGGTTATGATGGTCACCGGCGATCATCGCATCGGCATCTTTGCCAAGCGG
GCCATTCAGCCCGGCGAAGAGCTATTCTTTGACTACAGATACGGACCCAC
GGAGCAGCTGAAGTTCGTGGGCATAGAGCGTGAAATGGAAATTGTTTGAA
AGCTTTCTAGACCAT
BS01296.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:46:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RB | 2283 | CG6502-PB | 1..2283 | 17..2299 | 11415 | 100 | Plus |
E(z)-RA | 2283 | CG6502-PA | 1..2283 | 17..2299 | 11415 | 100 | Plus |
E(z)-RC | 2298 | CG6502-PC | 1..2298 | 17..2299 | 11230 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:46:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-RB | 2464 | CG6502-RB | 119..2401 | 17..2299 | 11415 | 100 | Plus |
E(z)-RA | 2650 | CG6502-RA | 305..2587 | 17..2299 | 11415 | 100 | Plus |
E(z)-RC | 2479 | CG6502-RC | 119..2416 | 17..2299 | 11230 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:46:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 10636843..10637578 | 873..138 | 3680 | 100 | Minus |
3L | 28110227 | 3L | 10635116..10635686 | 1889..1319 | 2855 | 100 | Minus |
3L | 28110227 | 3L | 10634638..10635047 | 2299..1890 | 2050 | 100 | Minus |
3L | 28110227 | 3L | 10635748..10635937 | 1319..1130 | 950 | 100 | Minus |
3L | 28110227 | 3L | 10636623..10636784 | 1032..871 | 810 | 100 | Minus |
3L | 28110227 | 3L | 10637639..10637761 | 139..17 | 615 | 100 | Minus |
3L | 28110227 | 3L | 10635995..10636093 | 1130..1032 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:46:56 has no hits.
BS01296.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:20 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RB | 1..2283 | 17..2299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:19 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RB | 111..2400 | 10..2299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:00 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 305..2586 | 17..2298 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:20 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RB | 111..2400 | 10..2299 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:11 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(z)-RA | 305..2586 | 17..2298 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:11 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 10634639..10635047 | 1890..2298 | 100 | <- | Minus |
3L | 10635116..10635685 | 1320..1889 | 100 | <- | Minus |
3L | 10635748..10635937 | 1130..1319 | 100 | <- | Minus |
3L | 10635996..10636093 | 1032..1129 | 100 | <- | Minus |
3L | 10636624..10636784 | 871..1031 | 100 | <- | Minus |
3L | 10636846..10637577 | 139..870 | 100 | <- | Minus |
3L | 10637640..10637761 | 17..138 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:00 Download gff for
BS01296.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 10627739..10628147 | 1890..2298 | 100 | <- | Minus |
arm_3L | 10628216..10628785 | 1320..1889 | 100 | <- | Minus |
arm_3L | 10628848..10629037 | 1130..1319 | 100 | <- | Minus |
arm_3L | 10629096..10629193 | 1032..1129 | 100 | <- | Minus |
arm_3L | 10629724..10629884 | 871..1031 | 100 | <- | Minus |
arm_3L | 10629946..10630677 | 139..870 | 100 | <- | Minus |
arm_3L | 10630740..10630861 | 17..138 | 100 | | Minus |
BS01296.pep Sequence
Translation from 16 to 2298
> BS01296.pep
MNSTKVPPEWKRRVKSEYIKIRQQKRYKRADEIKEAWIRNWDEHNHNVQD
LYCESKVWQAKPYDPPHVDCVKRAEVTSYNGIPSGPQKVPICVINAVTPI
PTMYTWAPTQQNFMVEDETVLHNIPYMGDEVLDKDGKFIEELIKNYDGKV
HGDKDPSFMDDAIFVELVHALMRSYSKELEEAAPGTATAIKTETLAKSKQ
GEDDGVVDVDADGESPMKLEKTDSKGDLTEVEKKETEEPLETEDADVKPD
VEEVKDKLPFPAPIIFQAISANFPDKGTAQELKEKYIELTEHQDPERPQE
CTPNIDGIKAESVSRERTMHSFHTLFCRRCFKYDCFLHRLQGHAGPNLQK
RRYPELKPFAEPCSNSCYMLIDGMKEKLAADSKTPPIDSCNEASSEDSND
SNSQFSNKDFNHENSKDNGLTVNSAAVAEINSIMAGMMNITSTQCVWTGA
DQALYRVLHKVYLKNYCAIAHNMLTKTCRQVYEFAQKEDAEFSFEDLRQD
FTPPRKKKKKQRLWSLHCRKIQLKKDSSSNHVYNYTPCDHPGHPCDMNCS
CIQTQNFCEKFCNCSSDCQNRFPGCRCKAQCNTKQCPCYLAVRECDPDLC
QACGADQFKLTKITCKNVCVQRGLHKHLLMAPSDIAGWGIFLKEGAQKNE
FISEYCGEIISQDEADRRGKVYDKYMCSFLFNLNNDFVVDATRKGNKIRF
ANHSINPNCYAKVMMVTGDHRIGIFAKRAIQPGEELFFDYRYGPTEQLKF
VGIEREMEIV*
BS01296.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(z)-PB | 760 | CG6502-PB | 1..760 | 1..760 | 4140 | 100 | Plus |
E(z)-PA | 760 | CG6502-PA | 1..760 | 1..760 | 4140 | 100 | Plus |
E(z)-PC | 765 | CG6502-PC | 1..765 | 1..760 | 4124 | 99.3 | Plus |
Su(var)3-9-PA | 635 | CG43664-PA | 410..621 | 547..759 | 235 | 30 | Plus |
Set1-PI | 1641 | CG40351-PI | 1502..1626 | 626..749 | 230 | 39.7 | Plus |