Clone Sequence Records
BS01315.5prime Sequence
760 bp (759 high quality bases) assembled on 2005-11-29
> BS01315.5prime
GAAGTTATCAGTCGACATGGCGGCTACACCACCAATGCCGCCCGGATCAA
ACACCCATCAATTGAATGGCAAAACAGTCGGCAAGGGGAACCCCCTAGCT
GAGGCGATCAATCAGCACTTTCAGCGGAAGAAACAGAATCAGCACCAGAG
TCCCAACCCCAGTCCAAACCCGAATCCCAACAGTCCCGCCAGCCGCAGCG
GGAGCTATGAGCAGCTGGAGCTGCTGGATCACGCAACGCATCCACAGCAA
CAACAGGAAGCCAGCAGTGGCAAGGCCAAGCCGAGCTGCCATTGCACCAA
CATTAGTATTATGCACCTGTTTCATGAGATGAAGCAGGAGTTCCCCACGA
TACCCGATGCCATAGTGACGCAATGCGTCAATGAGAATTGCCATCAGCGC
GAAAACTGTATCCAGATGTTGAGGAAGGAGCTCGCGCTTCATCCTATCCC
AGTGCAGAGCTATCCGGCAAAGGTGCTGCAGCAACAGCAGCAGCAACACC
ACCAGAATAGGCAGGCCAAGCCTCCCACGCCGCTCAAGCCGTCACGGATA
GCACCACCGCAGCCGGAAGCTGTGCTGAGCAATGGAGTGGCTACGCCGCC
AGGTGTTGGTAGCCCACATCCTGATACGCAGCCCAGGCCGCGACCCACGA
CGCTCAATCTGCAACGTCAGTTTAGCACTCAGCTGCAGCAAAAGATTATG
CAGCGCCAGCAGCGACAGCAGAGGGATCACCAGCCAGCCCAGCTGACGCC
CACTTCCTTG
BS01315.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7417-PA | 2496 | Tab2-RA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tab2-RB | 3305 | CG7417-RB | 419..1162 | 17..760 | 3720 | 100 | Plus |
Tab2-RC | 3081 | CG7417-RC | 363..1106 | 17..760 | 3720 | 100 | Plus |
Tab2-RA | 3249 | CG7417-RA | 363..1106 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:11:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19299200..19299943 | 17..760 | 3720 | 100 | Plus |
Blast to na_te.dros performed 2015-02-10 23:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2458 | 154..308 | 172 | 60.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6799..6892 | 475..568 | 136 | 63.2 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 938..1073 | 435..570 | 132 | 58.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6701..6784 | 428..514 | 130 | 64.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6829..6867 | 469..507 | 123 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6816 | 475..567 | 122 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2464 | 465..567 | 120 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6788..6825 | 476..513 | 118 | 78.9 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7958..7993 | 479..514 | 117 | 80.6 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9402..9437 | 479..514 | 117 | 80.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2844 | 465..521 | 116 | 69 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1115..1146 | 476..507 | 115 | 84.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2363 | 476..514 | 114 | 76.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6805 | 476..514 | 114 | 76.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1127..1171 | 476..519 | 114 | 75.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2400..2441 | 476..514 | 113 | 78.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1096..1132 | 478..514 | 113 | 78.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2380 | 479..513 | 112 | 80 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2440..2483 | 471..514 | 112 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6821..6916 | 476..568 | 112 | 60.4 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3259..3310 | 448..501 | 111 | 72.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2351 | 475..514 | 110 | 75 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1105..1144 | 475..514 | 110 | 75 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2374 | 476..504 | 109 | 86.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2802..2852 | 465..514 | 108 | 70.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2353..2386 | 471..504 | 107 | 79.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2782..2815 | 474..507 | 107 | 79.4 | Plus |
BS01315.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:06:30 Download gff for
BS01315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:15:06 Download gff for
BS01315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7417-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 05:17:25 Download gff for
BS01315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 363..1106 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:22:29 Download gff for
BS01315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 363..1106 | 17..760 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:22:29 Download gff for
BS01315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19299200..19299943 | 17..760 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 05:17:25 Download gff for
BS01315.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15186705..15187448 | 17..760 | 100 | | Plus |
BS01315.3prime Sequence
899 bp (774 high quality bases) assembled on 2005-11-29
> BS01315.3prime
ATGGTCTAGAAAGCTTTTATGTATGCAGAGCGTACGGCTGCTGGGACGGC
TGCTGTTGCTGCTCAATGCTGCCGGGTGGCGTGGCAGCAGCAGCAGCGGC
CCCGCCTCCACTGGGAACAATGCGTATCATACCCGGCTGGATCCTAACGT
TCTCACAGGCCTCACAAATATTTAGCTGTGGATGGTTGCGGAATGTACAC
ATGTTGCAGGCCCACGAGTCCAGCGTCTCCTCCTCCTCATCCACATCGGA
GTCGGACAGGAATTCTTCCTCCTGTTGTGGCTGCGGCTGCTGTTGCTGCT
GCATCTGGTGTTGTAGCTGCTGTTGCTGCTGCATCTGCTGTTGTAACTGC
TGCTGTCGCTGCTGCTGCAGATATTGCTGGAACTGATAGTACTGGGCGTA
CGTCGGTGGCGGCTCCTGCTGCAGCTGTAACAGTTGCTGTTGACTCTGCA
TCTGGGGCGTTAAACAGGCCGAGGTGGGAGCACTGCTGTGGTGCTGCCCA
AAGTCCTGCACCGGCTGGGAGATGGGTGCTGCCGGCACCGAGTGCAGACG
TAGTGAACTGGGCGGCGCCTGGACGCGAGCACTTTGACGCTGACGCGGGA
ATGGCTGTGGCTGTTGCTGCGGCTGCTGCTGTGAAGCATTGCTGGCTGGT
AACAGGTGCTGGCGGTTCGTGGGATTGGCCGCCGGACCAGGGCCATTCGC
CTGCGGTTCATTTAAGCAGTCAAGCAGCCGATTACAGTCCTCAGTCAGTT
GCTTGATATCTCTATCCAGTCTTTCAGATTCCCCCACCGGCACCGGCTCA
GTCAGGATGTTGATCTCCTGCTCCAGGACGAGCAGGCGCTTCTTTTGTGT
CCTCAGTGCATTGGCCAGCTTGTCGCGACGCTGCTTCTGACGCTCGATA
BS01315.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:49:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7417-PA | 2496 | Tab2-RA | 1669..2496 | 844..17 | 4140 | 100 | Minus |
CG7417-PA | 2496 | Tab2-RA | 1614..1662 | 899..851 | 245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:49:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tab2-RB | 3305 | CG7417-RB | 2032..2914 | 899..17 | 4355 | 99.7 | Minus |
Tab2-RA | 3249 | CG7417-RA | 1976..2858 | 899..17 | 4355 | 99.7 | Minus |
Tab2-RC | 3081 | CG7417-RC | 1976..2742 | 899..133 | 3775 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:49:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19302941..19303633 | 709..17 | 3465 | 100 | Minus |
2R | 25286936 | 2R | 19302688..19302878 | 899..709 | 880 | 97.4 | Minus |
Blast to na_te.dros performed 2015-02-10 20:49:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2282..2665 | 692..321 | 224 | 55.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2321..2665 | 632..273 | 206 | 56.7 | Minus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3243..3340 | 684..585 | 134 | 64.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6850..7086 | 497..267 | 133 | 57.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6844 | 677..584 | 129 | 65.7 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1046..1168 | 699..581 | 126 | 62.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..7154 | 671..249 | 121 | 54.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6695..6796 | 691..584 | 111 | 61.5 | Minus |
BS01315.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:06:29 Download gff for
BS01315.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-PA | 1615..2496 | 17..898 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:15:05 Download gff for
BS01315.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7417-PA | 1615..2496 | 17..898 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 09:36:46 Download gff for
BS01315.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 1977..2858 | 17..898 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:27:02 Download gff for
BS01315.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 1977..2858 | 17..898 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:27:02 Download gff for
BS01315.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19302689..19302878 | 709..898 | 98 | -> | Minus |
2R | 19302942..19303633 | 17..708 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 09:36:46 Download gff for
BS01315.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15190194..15190383 | 709..898 | 98 | -> | Minus |
arm_2R | 15190447..15191138 | 17..708 | 100 | | Minus |
BS01315.complete Sequence
2528 bp assembled on 2007-10-05
GenBank Submission: FJ634595
> BS01315.complete
GAAGTTATCAGTCGACATGGCGGCTACACCACCAATGCCGCCCGGATCAA
ACACCCATCAATTGAATGGCAAAACAGTCGGCAAGGGGAACCCCCTAGCT
GAGGCGATCAATCAGCACTTTCAGCGGAAGAAACAGAATCAGCACCAGAG
TCCCAACCCCAGTCCAAACCCGAATCCCAACAGTCCCGCCAGCCGCAGCG
GGAGCTATGAGCAGCTGGAGCTGCTGGATCACGCAACGCATCCACAGCAA
CAACAGGAAGCCAGCAGTGGCAAGGCCAAGCCGAGCTGCCATTGCACCAA
CATTAGTATTATGCACCTGTTTCATGAGATGAAGCAGGAGTTCCCCACGA
TACCCGATGCCATAGTGACGCAATGCGTCAATGAGAATTGCCATCAGCGC
GAAAACTGTATCCAGATGTTGAGGAAGGAGCTCGCGCTTCATCCTATCCC
AGTGCAGAGCTATCCGGCAAAGGTGCTGCAGCAACAGCAGCAGCAACACC
ACCAGAATAGGCAGGCCAAGCCTCCCACGCCGCTCAAGCCGTCACGGATA
GCACCACCGCAGCCGGAAGCTGTGCTGAGCAATGGAGTGGCTACGCCGCC
AGGTGTTGGTAGCCCACATCCTGATACGCAGCCCAGGCCGCGACCCACGA
CGCTCAATCTGCAACGTCAGTTTAGCACTCAGCTGCAGCAAAAGATTATG
CAGCGCCAGCAGCGACAGCAGAGGGATCACCAGCCAGCCCAGCTGACGCC
CACTTCCTTGAGCAAGCCGCTACGCCGGGCACCGCCACTTCCGCCGCCAC
CCAAACCGAAGCCCGGCAGCTTCTCCAACGATTCCTCGTGTCTCACCAGT
CCCATGAGCTCCAGCGAATCGGAGCTTTCGCTCAACGCGGTCCCCTTATC
GTCACCAACGTCGGCGGCGGCTACTGCTGCTGCGGCGTCAGCAGCAATCG
CATCAACGCAACAACAACCCTCGCCGGTGCGACATCGTTCAGTCATAACG
CTACAGCCAGAGCCGCCGTACGCGCGCGACTTTCGCAGCATTGACTTTCC
GCCGACGACCGCGTGTACGCCGCGGCTACCCTCGCCCAGTTCGGCAGCGT
CACCAAGTGCGCCTGGTGGACGCAAGAGCTTCACCTCGCTCAATCTCACC
CTGCGCCAGCCGACGGGCTCGGCACAATCGGCCATTGACATCACCGCCGG
TCCGGCGCCCAGTGGGCAGGGCAGTGGGATCACCTACTCCAGCGTTAGTT
TTGACGCACGTCGTGGGACGCAGAAGAATTTCCAGCTGACTGTGACGGAC
GAGGGCAGTGTCTTCAGTGCGGGCAGCGTTCGCCCAAGGACCTTGTACGC
AACGCCCTGTGAGCCGGTGACAAGTGTTCCGGCAAACCAGCAGCCTCCTC
CGCCCGCAGCAGTGGTGGCAGATGGTCTGGGGGACGCTGATATGACGTCG
GACGTTTTCCCATATCCCACGCAGGAGCAGAATCACATTGTGGCATCCAA
CTATAGTAACAACCATGCCGTCAGCGACAATAACAACATTGGGATCAGCA
ATAGCACGGACAGTAGTCCCACCATGCCCCTTTACGAAGGTGTCATGGAG
GAATGCGATCGCGAAGCTCGTGCCGCCACTATCGAGCGTCAGAAGCAGCG
TCGCGACAAGCTGGCCAATGCACTGAGGGACAACAAGAAGCGCCTGCTCG
TCCTGGAGCAGGAGATCAACATCCTGACTGAGCCGGTGCCGGTGGGGGAA
TCTGAAAGACTGGATAGAGATATCAAGCAACTGACTGAGGACTGTAATCG
GCTGCTTGACTGCTTAAATGAACCGCAGGCGAATGGCCCTGGTCCGGCGG
CCAATCCCACGAACCGCCAGCACCTGTTACCAGCCAGCAATGCTTCACAG
CAGCAGCCGCAGCAACAGCCACAGCCATTCCCGCGTCAGCGTCAAAGTGC
TCGCGTCCAGGCGCCGCCCAGTTCACTACGTCTGCACTCGGTGCCGGCAG
CACCCATCTCCCAGCCGGTGCAGGACTTTGGGCAGCACCACAGCAGTGCT
CCCACCTCGGCCTGTTTAACGCCCCAGATGCAGAGTCAACAGCAACTGTT
ACAGCTGCAGCAGGAGCCGCCACCGACGTACGCCCAGTACTATCAGTTCC
AGCAATATCTGCAGCAGCAGCGACAGCAGCAGTTACAACAGCAGATGCAG
CAGCAACAGCAGCTACAACACCAGATGCAGCAGCAACAGCAGCCGCAGCC
ACAACAGGAGGAAGAATTCCTGTCCGACTCCGATGTGGATGAGGAGGAGG
AGACGCTGGACTCGTGGGCCTGCAACATGTGTACATTCCGCAACCATCCA
CAGCTAAATATTTGTGAGGCCTGTGAGAACGTTAGGATCCAGCCGGGTAT
GATACGCATTGTTCCCAGTGGAGGCGGGGCCGCTGCTGCTGCTGCCACGC
CACCCGGCAGCATTGAGCAGCAACAGCAGCCGTCCCAGCAGCCGTACGCT
CTGCATACATAAAAGCTTTCTAGACCAT
BS01315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tab2-RB | 2496 | CG7417-PB | 1..2496 | 17..2512 | 12480 | 100 | Plus |
Tab2-RA | 2496 | CG7417-PA | 1..2496 | 17..2512 | 12480 | 100 | Plus |
Tab2-RC | 2463 | CG7417-PC | 1..2380 | 17..2396 | 11900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tab2-RB | 3305 | CG7417-RB | 419..2914 | 17..2512 | 12480 | 100 | Plus |
Tab2-RA | 3249 | CG7417-RA | 363..2858 | 17..2512 | 12480 | 100 | Plus |
Tab2-RC | 3081 | CG7417-RC | 363..2742 | 17..2396 | 11900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19299200..19300799 | 17..1616 | 8000 | 100 | Plus |
2R | 25286936 | 2R | 19302941..19303633 | 1820..2512 | 3465 | 100 | Plus |
2R | 25286936 | 2R | 19302673..19302878 | 1615..1820 | 1030 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:04:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2282..2665 | 1837..2208 | 224 | 55.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2458 | 154..308 | 172 | 60.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6799..6892 | 475..568 | 136 | 63.2 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3243..3340 | 1845..1944 | 134 | 64.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6850..7086 | 2032..2262 | 133 | 57.2 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 938..1073 | 435..570 | 132 | 58.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6701..6784 | 428..514 | 130 | 64.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6844 | 1852..1945 | 129 | 65.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1046..1168 | 1830..1948 | 126 | 62.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6829..6867 | 469..507 | 123 | 79.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6816 | 475..567 | 122 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..7154 | 1858..2280 | 121 | 54.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2361..2464 | 465..567 | 120 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6788..6825 | 476..513 | 118 | 78.9 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7958..7993 | 479..514 | 117 | 80.6 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 9402..9437 | 479..514 | 117 | 80.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2844 | 465..521 | 116 | 69 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1115..1146 | 476..507 | 115 | 84.4 | Plus |
BS01315.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:13 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 1..2496 | 17..2512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:50:44 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 324..2819 | 17..2512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:51:51 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 363..2856 | 17..2510 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:13 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 324..2819 | 17..2512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:44 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tab2-RA | 363..2856 | 17..2510 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:44 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19299200..19300799 | 17..1616 | 100 | -> | Plus |
2R | 19302675..19302878 | 1617..1820 | 100 | -> | Plus |
2R | 19302942..19303631 | 1821..2510 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:51:51 Download gff for
BS01315.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15186705..15188304 | 17..1616 | 100 | -> | Plus |
arm_2R | 15190180..15190383 | 1617..1820 | 100 | -> | Plus |
arm_2R | 15190447..15191136 | 1821..2510 | 100 | | Plus |
BS01315.pep Sequence
Translation from 16 to 2511
> BS01315.pep
MAATPPMPPGSNTHQLNGKTVGKGNPLAEAINQHFQRKKQNQHQSPNPSP
NPNPNSPASRSGSYEQLELLDHATHPQQQQEASSGKAKPSCHCTNISIMH
LFHEMKQEFPTIPDAIVTQCVNENCHQRENCIQMLRKELALHPIPVQSYP
AKVLQQQQQQHHQNRQAKPPTPLKPSRIAPPQPEAVLSNGVATPPGVGSP
HPDTQPRPRPTTLNLQRQFSTQLQQKIMQRQQRQQRDHQPAQLTPTSLSK
PLRRAPPLPPPPKPKPGSFSNDSSCLTSPMSSSESELSLNAVPLSSPTSA
AATAAAASAAIASTQQQPSPVRHRSVITLQPEPPYARDFRSIDFPPTTAC
TPRLPSPSSAASPSAPGGRKSFTSLNLTLRQPTGSAQSAIDITAGPAPSG
QGSGITYSSVSFDARRGTQKNFQLTVTDEGSVFSAGSVRPRTLYATPCEP
VTSVPANQQPPPPAAVVADGLGDADMTSDVFPYPTQEQNHIVASNYSNNH
AVSDNNNIGISNSTDSSPTMPLYEGVMEECDREARAATIERQKQRRDKLA
NALRDNKKRLLVLEQEINILTEPVPVGESERLDRDIKQLTEDCNRLLDCL
NEPQANGPGPAANPTNRQHLLPASNASQQQPQQQPQPFPRQRQSARVQAP
PSSLRLHSVPAAPISQPVQDFGQHHSSAPTSACLTPQMQSQQQLLQLQQE
PPPTYAQYYQFQQYLQQQRQQQLQQQMQQQQQLQHQMQQQQQPQPQQEEE
FLSDSDVDEEEETLDSWACNMCTFRNHPQLNICEACENVRIQPGMIRIVP
SGGGAAAAAATPPGSIEQQQQPSQQPYALHT*
BS01315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:19:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tab2-PB | 831 | CG7417-PB | 1..831 | 1..831 | 4378 | 100 | Plus |
Tab2-PA | 831 | CG7417-PA | 1..831 | 1..831 | 4378 | 100 | Plus |
Tab2-PC | 820 | CG7417-PC | 1..796 | 1..796 | 4184 | 99.6 | Plus |
CG44085-PH | 756 | CG44085-PH | 298..434 | 610..746 | 197 | 42.2 | Plus |
CG44085-PL | 833 | CG44085-PL | 375..511 | 610..746 | 197 | 42.2 | Plus |
CG44085-PH | 756 | CG44085-PH | 261..494 | 604..821 | 179 | 30.5 | Plus |
CG44085-PH | 756 | CG44085-PH | 229..396 | 606..749 | 174 | 34.5 | Plus |