Clone Sequence Records
BS01442.3prime Sequence
806 bp (774 high quality bases) assembled on 2005-11-29
> BS01442.3prime
ATGGTCTAGAAAGCTTCGTTAATTGAAACTTACCTCTTTATCTTTGGCAG
CTAATAGAACAGCAGGCTGGCCGTTGTTGTTGTTATTGTTCTTCTTCTTG
CGCTTCTCGCTGTTGCCGCTGCTGCTGTTATTATTATTGTTGTTGTTCGT
GTTGCTGGTGGCGGTGTTGCTGGTATTGTTGTTATTGCTGGTATTTGTAT
TGTTGTTGGCGCAATCATCGTCCTCCGCCGAACTGGCCACATGTTGCTCA
CTTTCATTGCCGCCATTGTTGTTCTTTCGACTACAACTATTATTGCTATC
GGTTGTATTGTGATTATTGCTAACATTTAAACTAGCCTCCCCCGCATCCT
TGTTCTCCTCAAGATCCTCTGTATCCTGCTGCTGATGCTGCTGTTGTGTT
GTTGCACTTGGCTCAGTTCTGGTTTCTTGCTGCGCATCCAGCTCCATATC
ATCAGCATTCGATTGCATCGAGGCATTCTCCTCCTCATCATCCTCGTCCT
CATCCTCCTCCTCGTCCTCCTCCTCATCGTCCAGCTCCTCCTCGTCCTGG
TGACTATTGTTGCTGTTGGTGTGATTGGCGTTGCTGGTGGTGCTGCCGCT
TTTGACGTTGCCAGTTGCAATCGGTGTTGCTGCTGCGGCTGCTGCAGCAG
CGGCTCCTGTTGCCACTGTTGCCGCTGGCTGTTCTGTGGGAATCGCAACT
TCATTCGCCGGCGAATGGAGTGGTGATTGCTGTTGCTGCTGCTGTTGCAA
TGCCGCCGCTGCTGCCGCGGCTGCCGCCCTCATCATCATCATGTCGACTG
ATAACT
BS01442.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11387-PB | 774 | ct-RB | 1..770 | 792..23 | 3800 | 99.7 | Minus |
| CG11387-PA | 6528 | ct-RA | 565..1323 | 792..34 | 3745 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ct-RE | 11035 | CG11387-RE | 833..1591 | 792..34 | 3765 | 99.7 | Minus |
| ct-RD | 10732 | CG11387-RD | 593..1351 | 792..34 | 3765 | 99.7 | Minus |
| ct-RC | 11062 | CG11387-RC | 923..1681 | 792..34 | 3765 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:23:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7646221..7646995 | 792..18 | 3830 | 99.6 | Minus |
Blast to na_te.dros performed 2015-02-10 17:23:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..3052 | 776..20 | 338 | 55 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..7035 | 732..380 | 312 | 57.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6943 | 777..541 | 298 | 63.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 747..546 | 290 | 63.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2254..2910 | 746..70 | 288 | 54.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6915 | 685..515 | 281 | 66.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2856 | 684..76 | 267 | 55.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7002 | 671..377 | 260 | 59.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6898 | 683..554 | 255 | 68.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2430 | 195..73 | 246 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2867 | 634..30 | 228 | 55.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2666 | 440..77 | 217 | 57.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6880 | 634..475 | 208 | 61.3 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 701..589 | 194 | 65.5 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1088..1173 | 686..600 | 189 | 70.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2895 | 676..547 | 178 | 61.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6855 | 610..476 | 177 | 60 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2663 | 773..621 | 176 | 62.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2955 | 686..534 | 173 | 59 | Minus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3255..3375 | 677..555 | 168 | 64 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1058..1157 | 175..70 | 165 | 65.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6927 | 591..374 | 163 | 57.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..7112 | 433..76 | 162 | 54.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7142..7200 | 616..558 | 132 | 73.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1485..1614 | 708..581 | 122 | 60.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6912 | 443..353 | 121 | 62 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1090..1146 | 433..374 | 121 | 71.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1589 | 610..548 | 115 | 68.2 | Minus |
| TART-A | 13424 | TART-A 13424bp | 8639..8677 | 642..604 | 114 | 76.9 | Minus |
BS01442.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 07:08:13 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:15 Download gff for
BS01442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11387-PB | 1..774 | 19..792 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:09:24 Download gff for
BS01442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RC | 917..1681 | 34..800 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:08:36 Download gff for
BS01442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RC | 917..1681 | 34..800 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:08:36 Download gff for
BS01442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7646215..7647003 | 11..800 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:09:24 Download gff for
BS01442.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7540248..7541036 | 11..800 | 98 | | Minus |
BS01442.5prime Sequence
746 bp (745 high quality bases) assembled on 2005-11-29
> BS01442.5prime
GAAGTTATCAGTCGACATGATGATGATGGAGGCGGCAGCCGCGGCAGCAG
CGGCGGCATTGCAACAGCAGCAGCAACAGCAATCACCACTCCATTCGCCG
GCGAATGAAGTTGCGATTCCCACAGAACAGCCAGCGGCAACAGTGGCAAC
AGGAGCCGCTGCTGCAGCAGCCGCAGCAGCAACACCGATTGCAACTGGCA
ACGTCAAAAGCGGCAGCACCACCAGCAACGCCAATCACACCAACAGCAAC
AATAGTCACCAGGACGAGGAGGAGCTGGACGATGAGGAGGAGGACGAGGA
GGAGGATGAGGACGAGGATGATGAGGAGGAGAATGCCTCGATGCAATCGA
ATGCTGATGATATGGAGCTGGATGCGCAGCAAGAAACCAGAACTGAGCCA
AGTGCAACAACACAACAGCAGCATCAGCAGCAGGATACAGAGGATCTTGA
GGAGAACAAGGATGCGGGGGAGGCTAGTTTAAATGTTAGCAATAATCACA
ATACAACCGATAGCAATAATAGTTGTAGTCGAAAGAACAACAATGGCGGC
AATGAAAGTGAGCAACATGTGGCCAGTTCGGCGGAGGACGATGATTGCGC
CAACAACAATACAAATACCAGCAATAACAACAATACCAGCAACACCGCCA
CCAGCAACACGAACAACAACAATAATAATAACAGCAGCAGCGGCAACAGC
GAGAAGCGCAAGAAGAAGAACAATAACAACAACAACGGCCAGCCTG
BS01442.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:50:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11387-PA | 6528 | ct-RA | 565..1294 | 17..746 | 3650 | 100 | Plus |
| CG11387-PB | 774 | ct-RB | 1..730 | 17..746 | 3650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:22:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ct-RE | 11035 | CG11387-RE | 833..1562 | 17..746 | 3650 | 100 | Plus |
| ct-RD | 10732 | CG11387-RD | 593..1322 | 17..746 | 3650 | 100 | Plus |
| ct-RC | 11062 | CG11387-RC | 923..1652 | 17..746 | 3650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 04:22:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7646221..7646950 | 17..746 | 3650 | 100 | Plus |
Blast to na_te.dros performed 2015-02-04 04:22:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2967 | 47..739 | 325 | 55.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2987 | 33..705 | 323 | 54.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..7035 | 77..429 | 312 | 57.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6943 | 32..268 | 298 | 63.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 62..263 | 290 | 63.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2254..2910 | 63..739 | 288 | 54.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6915 | 124..294 | 281 | 66.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2856 | 125..733 | 267 | 55.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7002 | 138..432 | 260 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6898 | 126..255 | 255 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2430 | 614..736 | 246 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2820 | 175..736 | 218 | 55.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2666 | 369..732 | 217 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6880 | 175..334 | 208 | 61.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 108..220 | 194 | 65.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1088..1173 | 123..209 | 189 | 70.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2895 | 133..262 | 178 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6855 | 199..333 | 177 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2663 | 36..188 | 176 | 62.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2955 | 123..275 | 173 | 59 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3255..3375 | 132..254 | 168 | 64 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1058..1157 | 634..739 | 165 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6927 | 218..435 | 163 | 57.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..7112 | 376..733 | 162 | 54.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7142..7200 | 193..251 | 132 | 73.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1485..1614 | 101..228 | 122 | 60.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6912 | 366..456 | 121 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1090..1146 | 376..435 | 121 | 71.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1589 | 199..261 | 115 | 68.2 | Plus |
| TART-A | 13424 | TART-A 13424bp | 8639..8677 | 167..205 | 114 | 76.9 | Plus |
BS01442.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed on 2007-01-18 07:08:14 has no hits.
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:16 Download gff for
BS01442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11387-PB | 1..730 | 17..746 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 05:10:22 Download gff for
BS01442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RC | 917..1652 | 9..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:51:18 Download gff for
BS01442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RC | 917..1652 | 9..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:51:18 Download gff for
BS01442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7646215..7646950 | 9..746 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 05:10:22 Download gff for
BS01442.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7540248..7540983 | 9..746 | 99 | | Plus |
BS01442.complete Sequence
808 bp assembled on 2009-02-12
> BS01442.complete
GAAGTTATCAGTCGACATGATGATGATGGAGGCGGCAGCCGCGGCAGCAG
CGGCGGCATTGCAACAGCAGCAGCAACAGCAATCACCACTCCATTCGCCG
GCGAATGAAGTTGCGATTCCCACAGAACAGCCAGCGGCAACAGTGGCAAC
AGGAGCCGCTGCTGCAGCAGCCGCAGCAGCAACACCGATTGCAACTGGCA
ACGTCAAAAGCGGCAGCACCACCAGCAACGCCAATCACACCAACAGCAAC
AATAGTCACCAGGACGAGGAGGAGCTGGACGATGAGGAGGAGGACGAGGA
GGAGGATGAGGACGAGGATGATGAGGAGGAGAATGCCTCGATGCAATCGA
ATGCTGATGATATGGAGCTGGATGCGCAGCAAGAAACCAGAACTGAGCCA
AGTGCAACAACACAACAGCAGCATCAGCAGCAGGATACAGAGGATCTTGA
GGAGAACAAGGATGCGGGGGAGGCTAGTTTAAATGTTAGCAATAATCACA
ATACAACCGATAGCAATAATAGTTGTAGTCGAAAGAACAACAATGGCGGC
AATGAAAGTGAGCAACATGTGGCCAGTTCGGCGGAGGACGATGATTGCGC
CAACAACAATACAAATACCAGCAATAACAACAATACCAGCAACACCGCCA
CCAGCAACACGAACAACAACAATAATAATAACAGCAGCAGCGGCAACAGC
GAGAAGCGCAAGAAGAAGAACAATAACAACAACAACGGCCAGCCTGCTGT
TCTATTAGCTGCCAAAGATAAAGAGGTAAGTTTCAATTAACGAAGCTTTC
TAGACCAT
BS01442.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ct-RE | 6525 | CG11387-PE | 565..1323 | 17..775 | 3795 | 100 | Plus |
| ct-RD | 6498 | CG11387-PD | 1..759 | 17..775 | 3795 | 100 | Plus |
| ct-RC | 7152 | CG11387-PC | 655..1413 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ct-RE | 11035 | CG11387-RE | 833..1591 | 17..775 | 3795 | 100 | Plus |
| ct-RD | 10732 | CG11387-RD | 593..1351 | 17..775 | 3795 | 100 | Plus |
| ct-RC | 11062 | CG11387-RC | 923..1681 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7646221..7646995 | 17..791 | 3860 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-27 21:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..3052 | 33..789 | 338 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6680..7035 | 77..429 | 312 | 57.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6943 | 32..268 | 298 | 63.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6929 | 62..263 | 290 | 63.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2254..2910 | 63..739 | 288 | 54.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6915 | 124..294 | 281 | 66.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2856 | 125..733 | 267 | 55.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..7002 | 138..432 | 260 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6898 | 126..255 | 255 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2430 | 614..736 | 246 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2273..2867 | 175..779 | 228 | 55.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2299..2666 | 369..732 | 217 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6880 | 175..334 | 208 | 61.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1048..1163 | 108..220 | 194 | 65.5 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1088..1173 | 123..209 | 189 | 70.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..2895 | 133..262 | 178 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6855 | 199..333 | 177 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2499..2663 | 36..188 | 176 | 62.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2955 | 123..275 | 173 | 59 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3255..3375 | 132..254 | 168 | 64 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1058..1157 | 634..739 | 165 | 65.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6927 | 218..435 | 163 | 57.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..7112 | 376..733 | 162 | 54.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7142..7200 | 193..251 | 132 | 73.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1485..1614 | 101..228 | 122 | 60.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6822..6912 | 366..456 | 121 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1090..1146 | 376..435 | 121 | 71.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1524..1589 | 199..261 | 115 | 68.2 | Plus |
| TART-A | 13424 | TART-A 13424bp | 8639..8677 | 167..205 | 114 | 76.9 | Plus |
BS01442.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:18 Download gff for
BS01442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RB | 589..1363 | 17..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:30 Download gff for
BS01442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RC | 923..1681 | 17..775 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:32 Download gff for
BS01442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ct-RC | 923..1681 | 17..775 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:32 Download gff for
BS01442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7646221..7646995 | 17..792 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:30 Download gff for
BS01442.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7540254..7541028 | 17..792 | 99 | | Plus |
BS01442.pep Sequence
Translation from 16 to 789
> BS01442.pep
MMMMEAAAAAAAAALQQQQQQQSPLHSPANEVAIPTEQPAATVATGAAAA
AAAAATPIATGNVKSGSTTSNANHTNSNNSHQDEEELDDEEEDEEEDEDE
DDEEENASMQSNADDMELDAQQETRTEPSATTQQQHQQQDTEDLEENKDA
GEASLNVSNNHNTTDSNNSCSRKNNNGGNESEQHVASSAEDDDCANNNTN
TSNNNNTSNTATSNTNNNNNNNSSSGNSEKRKKKNNNNNNGQPAVLLAAK
DKEVSFN*
BS01442.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ct-PD | 2165 | CG11387-PD | 1..254 | 1..254 | 1300 | 99.6 | Plus |
| ct-PE | 2174 | CG11387-PE | 189..442 | 1..254 | 1300 | 99.6 | Plus |
| ct-PA | 2175 | CG11387-PA | 189..442 | 1..254 | 1300 | 99.6 | Plus |
| ct-PC | 2383 | CG11387-PC | 219..472 | 1..254 | 1300 | 99.6 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 271..487 | 18..252 | 205 | 20.4 | Plus |
