Clone Sequence Records
BS01444.3prime Sequence
809 bp (753 high quality bases) assembled on 2005-11-29
> BS01444.3prime
ATGGTCTAGAAAGCTTCGTTACTTGTCGTGCCGCAACTTAGCGCCCAGAG
ACGCGAAAGCCTCGTGGCAGATGGTGCACTGGAACCTGCGGTTAATTAAA
TGAACCTGGGTGCGATGCTGCTTGAGAAGCGCCTTCTTGTTAAAAGTCTG
TGGGCACTCAGGGCAGGGGAAGAACTGGTTCATATCCCGCCGGTTCTGGT
GCCCATTTAAATGCTCGGTGTACAGGAACGCATCGTGGAACAGGGTTCCA
CACTCGTCGCAGATAAAGAAGTTACTGCGCCTCTTGGCGGCCCGCTCCAT
TTCCTGCTCCTGTAGATCCTCCTGCTGCGCCGCTTCTGCTGCCGCCTCTG
CTGCCGCTATCACAGCGGCAGAGGGGTCGTCATCCAGCTCGATTTCCTCT
AGGTCTTGGTGTTCCTCTTTCGTGCCTTGATAACAAACGTACTGGTCGTC
ATCGTAGTGCGTCTCCAATTGATCCGCATCGATCAGTTGCTCGTCCAGCG
GCTCGGAACTAAGCTCAACGTGAACAGTGCTTTGATCACTGGTCTTCTTT
ATGATATCCAGCAGGTACTTTTGCGAGAAGATGCACCGCTCGCGGAACTT
GGTGGCCAGGTCCAGCTCGGAGAAGCAGCGCTCGCAAACAATCTCCGGCA
GCCCCTGGTTTCTTGTCAGCTCCACTCCCGTGATTAGCTTCAGTTGACCC
AAATATTTTCCCCGCATGTGAATGAATATGTTGCGATCTCGCTGGTGGCC
CATAATTTTGTTGGCGCAAATACGGCAAACGTCGGCGAGGTTCATGTCGA
CTGATAACT
BS01444.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:50:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-PA | 777 | CG14667-RA | 1..777 | 795..19 | 3885 | 100 | Minus |
CG14667-PB | 1014 | CG14667-RB | 1..773 | 795..23 | 3865 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:45:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-RB | 1260 | CG14667-RB | 70..842 | 795..23 | 3865 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:45:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5375276..5375935 | 671..12 | 3270 | 99.7 | Minus |
3R | 32079331 | 3R | 5375091..5375216 | 795..670 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 16:45:36 has no hits.
BS01444.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:15 Download gff for
BS01444.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-PA | 1..777 | 19..795 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:18 Download gff for
BS01444.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-PA | 1..777 | 19..795 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:29:07 Download gff for
BS01444.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RA | 22..805 | 12..795 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:54:25 Download gff for
BS01444.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RB | 70..842 | 23..795 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:54:25 Download gff for
BS01444.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5375091..5375216 | 670..795 | 100 | -> | Minus |
3R | 5375278..5375935 | 12..669 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:29:07 Download gff for
BS01444.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1200813..1200938 | 670..795 | 100 | -> | Minus |
arm_3R | 1201000..1201657 | 12..669 | 99 | | Minus |
BS01444.5prime Sequence
812 bp (723 high quality bases) assembled on 2005-11-29
> BS01444.5prime
GAAGTTATCAGTCGACATGAACCTCGCCGACGTTTGCCGTATTTGCGCCA
ACAAAATTATGGGCCACCAGCGAGATCGCAACATATTCATTCACATGCGG
GGAAAATATTTGGGTCAACTGAAGCTAATCACGGGAGTGGAGCTGACAAG
AAACCAGGGGCTGCCGGAGATTGTTTGCGAGCGCTGCTTCTCCGAGCTGG
ACCTGGCCACCAAGTTCCGCGAGCGGTGCATCTTCTCGCAAAAGTACCTG
CTGGATATCATAAAGAAGACCAGTGATCAAAGCACTGTTCACGTTGAGCT
TAGTTCCGAGCCGCTGGACGAGCAACTGATCGATGCGGATCAATTGGAGA
CGCACTACGATGACGACCAGTACGTTTGTTATCAAGGCACGAAAGAGGAA
CACCAAGACCTAGAGGAAATCGAGCTGGATGACGACCCCTCTGCCGCTGT
GATAGCGGCAGCAGAGGCGGCAGCAGAAGCGGCGCAGCAGGAGGATCTAC
AGGAGCAGGAAATGGAGCGGGCCGCCAAGAGGCGCAGTAACTTCTTTATC
TGCGACGAGTGTGGAACCCTGTTCCACGATGCGTTCCTGTACACCGAGCA
TTTAAATGGGCACCAGAACCGGCGGGATATGAACCAGTTCTTCCCCTGCC
CTGAGTGCCCACAGACTTTTAACAAGAAGGCGCTTCTCAAGCAGCATCGC
ACCCAGGTTCATTTAATTAACCGCAGGTTCCAGTGCACCATCTGCCACGA
GGCTTTCGCGTCTCTGGGCGCTAAGTTGCGGCACGACAAGTAACGAAGCT
TTCTAGACCATT
BS01444.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:50:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-PA | 777 | CG14667-RA | 1..777 | 17..793 | 3885 | 100 | Plus |
CG14667-PB | 1014 | CG14667-RB | 1..773 | 17..789 | 3865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:21:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-RB | 1260 | CG14667-RB | 70..842 | 17..789 | 3865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:21:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5375276..5375935 | 141..800 | 3270 | 99.7 | Plus |
3R | 32079331 | 3R | 5375091..5375216 | 17..142 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:21:28 has no hits.
BS01444.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:16 Download gff for
BS01444.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-PA | 1..777 | 17..793 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:19 Download gff for
BS01444.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-PA | 1..777 | 17..793 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:35:53 Download gff for
BS01444.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RA | 22..805 | 17..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:24 Download gff for
BS01444.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RB | 70..842 | 17..789 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:24 Download gff for
BS01444.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5375091..5375216 | 17..142 | 100 | -> | Plus |
3R | 5375278..5375935 | 143..800 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:35:53 Download gff for
BS01444.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1200813..1200938 | 17..142 | 100 | -> | Plus |
arm_3R | 1201000..1201657 | 143..800 | 99 | | Plus |
BS01444.complete Sequence
811 bp (811 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634611
> BS01444.complete
GAAGTTATCAGTCGACATGAACCTCGCCGACGTTTGCCGTATTTGCGCCA
ACAAAATTATGGGCCACCAGCGAGATCGCAACATATTCATTCACATGCGG
GGAAAATATTTGGGTCAACTGAAGCTAATCACGGGAGTGGAGCTGACAAG
AAACCAGGGGCTGCCGGAGATTGTTTGCGAGCGCTGCTTCTCCGAGCTGG
ACCTGGCCACCAAGTTCCGCGAGCGGTGCATCTTCTCGCAAAAGTACCTG
CTGGATATCATAAAGAAGACCAGTGATCAAAGCACTGTTCACGTTGAGCT
TAGTTCCGAGCCGCTGGACGAGCAACTGATCGATGCGGATCAATTGGAGA
CGCACTACGATGACGACCAGTACGTTTGTTATCAAGGCACGAAAGAGGAA
CACCAAGACCTAGAGGAAATCGAGCTGGATGACGACCCCTCTGCCGCTGT
GATAGCGGCAGCAGAGGCGGCAGCAGAAGCGGCGCAGCAGGAGGATCTAC
AGGAGCAGGAAATGGAGCGGGCCGCCAAGAGGCGCAGTAACTTCTTTATC
TGCGACGAGTGTGGAACCCTGTTCCACGATGCGTTCCTGTACACCGAGCA
TTTAAATGGGCACCAGAACCGGCGGGATATGAACCAGTTCTTCCCCTGCC
CTGAGTGCCCACAGACTTTTAACAAGAAGGCGCTTCTCAAGCAGCATCGC
ACCCAGGTTCATTTAATTAACCGCAGGTTCCAGTGCACCATCTGCCACGA
GGCTTTCGCGTCTCTGGGCGCTAAGTTGCGGCACGACAAGTAACGAAGCT
TTCTAGACCAT
BS01444.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:53:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-RB | 1014 | CG14667-PB | 1..773 | 17..789 | 3865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-RB | 1260 | CG14667-RB | 70..842 | 17..789 | 3865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:53:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5375276..5375935 | 141..800 | 3270 | 99.7 | Plus |
3R | 32079331 | 3R | 5375091..5375216 | 17..142 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:53:26 has no hits.
BS01444.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:12 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RA | 1..777 | 17..793 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:08 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RA | 22..805 | 17..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:35 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RA | 22..799 | 17..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:12 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RA | 22..805 | 17..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:56 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14667-RB | 70..844 | 17..795 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:56 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5375091..5375216 | 17..142 | 100 | -> | Plus |
3R | 5375278..5375929 | 143..795 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:35 Download gff for
BS01444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1200813..1200938 | 17..142 | 100 | -> | Plus |
arm_3R | 1201000..1201651 | 143..795 | 99 | | Plus |
BS01444.pep Sequence
Translation from 16 to 792
> BS01444.pep
MNLADVCRICANKIMGHQRDRNIFIHMRGKYLGQLKLITGVELTRNQGLP
EIVCERCFSELDLATKFRERCIFSQKYLLDIIKKTSDQSTVHVELSSEPL
DEQLIDADQLETHYDDDQYVCYQGTKEEHQDLEEIELDDDPSAAVIAAAE
AAAEAAQQEDLQEQEMERAAKRRSNFFICDECGTLFHDAFLYTEHLNGHQ
NRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQCTICHEAFASL
GAKLRHDK*
BS01444.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:51:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14667-PB | 337 | CG14667-PB | 1..258 | 1..258 | 1372 | 100 | Plus |
CG8159-PB | 399 | CG8159-PB | 2..268 | 3..258 | 224 | 24.9 | Plus |
M1BP-PA | 418 | CG9797-PA | 8..327 | 2..258 | 210 | 23.3 | Plus |
ranshi-PA | 346 | CG9793-PA | 5..272 | 6..258 | 198 | 23.7 | Plus |
CG11762-PA | 312 | CG11762-PA | 5..243 | 6..258 | 187 | 25.1 | Plus |