Clone BS01444 Report

Search the DGRC for BS01444

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:14
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG14667-RA
Protein status:BS01444.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01444.3prime Sequence

809 bp (753 high quality bases) assembled on 2005-11-29

> BS01444.3prime
ATGGTCTAGAAAGCTTCGTTACTTGTCGTGCCGCAACTTAGCGCCCAGAG
ACGCGAAAGCCTCGTGGCAGATGGTGCACTGGAACCTGCGGTTAATTAAA
TGAACCTGGGTGCGATGCTGCTTGAGAAGCGCCTTCTTGTTAAAAGTCTG
TGGGCACTCAGGGCAGGGGAAGAACTGGTTCATATCCCGCCGGTTCTGGT
GCCCATTTAAATGCTCGGTGTACAGGAACGCATCGTGGAACAGGGTTCCA
CACTCGTCGCAGATAAAGAAGTTACTGCGCCTCTTGGCGGCCCGCTCCAT
TTCCTGCTCCTGTAGATCCTCCTGCTGCGCCGCTTCTGCTGCCGCCTCTG
CTGCCGCTATCACAGCGGCAGAGGGGTCGTCATCCAGCTCGATTTCCTCT
AGGTCTTGGTGTTCCTCTTTCGTGCCTTGATAACAAACGTACTGGTCGTC
ATCGTAGTGCGTCTCCAATTGATCCGCATCGATCAGTTGCTCGTCCAGCG
GCTCGGAACTAAGCTCAACGTGAACAGTGCTTTGATCACTGGTCTTCTTT
ATGATATCCAGCAGGTACTTTTGCGAGAAGATGCACCGCTCGCGGAACTT
GGTGGCCAGGTCCAGCTCGGAGAAGCAGCGCTCGCAAACAATCTCCGGCA
GCCCCTGGTTTCTTGTCAGCTCCACTCCCGTGATTAGCTTCAGTTGACCC
AAATATTTTCCCCGCATGTGAATGAATATGTTGCGATCTCGCTGGTGGCC
CATAATTTTGTTGGCGCAAATACGGCAAACGTCGGCGAGGTTCATGTCGA
CTGATAACT

BS01444.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-PA 777 CG14667-RA 1..777 795..19 3885 100 Minus
CG14667-PB 1014 CG14667-RB 1..773 795..23 3865 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:45:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-RB 1260 CG14667-RB 70..842 795..23 3865 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5375276..5375935 671..12 3270 99.7 Minus
3R 32079331 3R 5375091..5375216 795..670 630 100 Minus
Blast to na_te.dros performed on 2015-01-30 16:45:36 has no hits.

BS01444.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:15 Download gff for BS01444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-PA 1..777 19..795 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:18 Download gff for BS01444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-PA 1..777 19..795 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:29:07 Download gff for BS01444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-RA 22..805 12..795 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:54:25 Download gff for BS01444.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-RB 70..842 23..795 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:54:25 Download gff for BS01444.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5375091..5375216 670..795 100 -> Minus
3R 5375278..5375935 12..669 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:29:07 Download gff for BS01444.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1200813..1200938 670..795 100 -> Minus
arm_3R 1201000..1201657 12..669 99   Minus

BS01444.5prime Sequence

812 bp (723 high quality bases) assembled on 2005-11-29

> BS01444.5prime
GAAGTTATCAGTCGACATGAACCTCGCCGACGTTTGCCGTATTTGCGCCA
ACAAAATTATGGGCCACCAGCGAGATCGCAACATATTCATTCACATGCGG
GGAAAATATTTGGGTCAACTGAAGCTAATCACGGGAGTGGAGCTGACAAG
AAACCAGGGGCTGCCGGAGATTGTTTGCGAGCGCTGCTTCTCCGAGCTGG
ACCTGGCCACCAAGTTCCGCGAGCGGTGCATCTTCTCGCAAAAGTACCTG
CTGGATATCATAAAGAAGACCAGTGATCAAAGCACTGTTCACGTTGAGCT
TAGTTCCGAGCCGCTGGACGAGCAACTGATCGATGCGGATCAATTGGAGA
CGCACTACGATGACGACCAGTACGTTTGTTATCAAGGCACGAAAGAGGAA
CACCAAGACCTAGAGGAAATCGAGCTGGATGACGACCCCTCTGCCGCTGT
GATAGCGGCAGCAGAGGCGGCAGCAGAAGCGGCGCAGCAGGAGGATCTAC
AGGAGCAGGAAATGGAGCGGGCCGCCAAGAGGCGCAGTAACTTCTTTATC
TGCGACGAGTGTGGAACCCTGTTCCACGATGCGTTCCTGTACACCGAGCA
TTTAAATGGGCACCAGAACCGGCGGGATATGAACCAGTTCTTCCCCTGCC
CTGAGTGCCCACAGACTTTTAACAAGAAGGCGCTTCTCAAGCAGCATCGC
ACCCAGGTTCATTTAATTAACCGCAGGTTCCAGTGCACCATCTGCCACGA
GGCTTTCGCGTCTCTGGGCGCTAAGTTGCGGCACGACAAGTAACGAAGCT
TTCTAGACCATT

BS01444.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-PA 777 CG14667-RA 1..777 17..793 3885 100 Plus
CG14667-PB 1014 CG14667-RB 1..773 17..789 3865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:21:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-RB 1260 CG14667-RB 70..842 17..789 3865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5375276..5375935 141..800 3270 99.7 Plus
3R 32079331 3R 5375091..5375216 17..142 630 100 Plus
Blast to na_te.dros performed on 2015-02-12 06:21:28 has no hits.

BS01444.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:16 Download gff for BS01444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-PA 1..777 17..793 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:19 Download gff for BS01444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-PA 1..777 17..793 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 03:35:53 Download gff for BS01444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-RA 22..805 17..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:06:24 Download gff for BS01444.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14667-RB 70..842 17..789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:06:24 Download gff for BS01444.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5375091..5375216 17..142 100 -> Plus
3R 5375278..5375935 143..800 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 03:35:53 Download gff for BS01444.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1200813..1200938 17..142 100 -> Plus
arm_3R 1201000..1201657 143..800 99   Plus

BS01444.complete Sequence

811 bp (811 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634611

> BS01444.complete
GAAGTTATCAGTCGACATGAACCTCGCCGACGTTTGCCGTATTTGCGCCA
ACAAAATTATGGGCCACCAGCGAGATCGCAACATATTCATTCACATGCGG
GGAAAATATTTGGGTCAACTGAAGCTAATCACGGGAGTGGAGCTGACAAG
AAACCAGGGGCTGCCGGAGATTGTTTGCGAGCGCTGCTTCTCCGAGCTGG
ACCTGGCCACCAAGTTCCGCGAGCGGTGCATCTTCTCGCAAAAGTACCTG
CTGGATATCATAAAGAAGACCAGTGATCAAAGCACTGTTCACGTTGAGCT
TAGTTCCGAGCCGCTGGACGAGCAACTGATCGATGCGGATCAATTGGAGA
CGCACTACGATGACGACCAGTACGTTTGTTATCAAGGCACGAAAGAGGAA
CACCAAGACCTAGAGGAAATCGAGCTGGATGACGACCCCTCTGCCGCTGT
GATAGCGGCAGCAGAGGCGGCAGCAGAAGCGGCGCAGCAGGAGGATCTAC
AGGAGCAGGAAATGGAGCGGGCCGCCAAGAGGCGCAGTAACTTCTTTATC
TGCGACGAGTGTGGAACCCTGTTCCACGATGCGTTCCTGTACACCGAGCA
TTTAAATGGGCACCAGAACCGGCGGGATATGAACCAGTTCTTCCCCTGCC
CTGAGTGCCCACAGACTTTTAACAAGAAGGCGCTTCTCAAGCAGCATCGC
ACCCAGGTTCATTTAATTAACCGCAGGTTCCAGTGCACCATCTGCCACGA
GGCTTTCGCGTCTCTGGGCGCTAAGTTGCGGCACGACAAGTAACGAAGCT
TTCTAGACCAT

BS01444.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:53:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-RB 1014 CG14667-PB 1..773 17..789 3865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-RB 1260 CG14667-RB 70..842 17..789 3865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:53:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5375276..5375935 141..800 3270 99.7 Plus
3R 32079331 3R 5375091..5375216 17..142 630 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:53:26 has no hits.

BS01444.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:12 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
CG14667-RA 1..777 17..793 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:08 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
CG14667-RA 22..805 17..800 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:35 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
CG14667-RA 22..799 17..795 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:12 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
CG14667-RA 22..805 17..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:56 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
CG14667-RB 70..844 17..795 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:56 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5375091..5375216 17..142 100 -> Plus
3R 5375278..5375929 143..795 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:35 Download gff for BS01444.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1200813..1200938 17..142 100 -> Plus
arm_3R 1201000..1201651 143..795 99   Plus

BS01444.pep Sequence

Translation from 16 to 792

> BS01444.pep
MNLADVCRICANKIMGHQRDRNIFIHMRGKYLGQLKLITGVELTRNQGLP
EIVCERCFSELDLATKFRERCIFSQKYLLDIIKKTSDQSTVHVELSSEPL
DEQLIDADQLETHYDDDQYVCYQGTKEEHQDLEEIELDDDPSAAVIAAAE
AAAEAAQQEDLQEQEMERAAKRRSNFFICDECGTLFHDAFLYTEHLNGHQ
NRRDMNQFFPCPECPQTFNKKALLKQHRTQVHLINRRFQCTICHEAFASL
GAKLRHDK*

BS01444.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14667-PB 337 CG14667-PB 1..258 1..258 1372 100 Plus
CG8159-PB 399 CG8159-PB 2..268 3..258 224 24.9 Plus
M1BP-PA 418 CG9797-PA 8..327 2..258 210 23.3 Plus
ranshi-PA 346 CG9793-PA 5..272 6..258 198 23.7 Plus
CG11762-PA 312 CG11762-PA 5..243 6..258 187 25.1 Plus