Clone Sequence Records
BS01448.3prime Sequence
858 bp (797 high quality bases) assembled on 2005-11-29
> BS01448.3prime
ATGGTCTAGAAAGCTTCGCTAGACCTCGTGGCTCAGTAGAGGCGTATCAT
GGTAGCGGGAGGCATGATTGAGACTGGTGCAGGGCAGCAGCCACAGCGCC
GGATGTCCGCGTCCGAACACATCCGCCAGCAGCTGGTACTTGCGCCGATT
TGGACGATAGGTGCCCTTCTGCTGTATCGCCTCCACGGCCGTCTCGTCGT
ACAGAATCGCATGCAGCTGGTCCACCATGATGGCCGTAACGAACAGGCCG
AACAGCGCCGACACCAGCATAAGGATAACCGAGTGAATCATTCGCAACTG
GGTTTCGATCACGTTCTGGCTGCACTCCTCGCAGGGCCACACCCAGGAAC
CGACGATAAGGGCAATGGAGTAGAGCGACAGCAGCGCCACGTAGATGAGG
AACTGCAGGAAGTACTTCTGATTGCGCTCGCCCACACAGTTGTTGATCCA
GGGGCAGTGGTGATCCATGCGCCGGATGCACCGCTTGCAGATGCGACAAT
GATGGGCGCGTGGCGGCCTATACGTTTCGCAGCGGGTGCACACGGTCCAT
TCGCTGCTGTGTCCATTACCGGGCGGAGGATTGTTTTTGTTGGTCGTGTG
CAGGTCGGAGAAGTCCAGACGATTGGCGGGCAGCGGCACAGTGCCTGGAT
CGGAGAACACGGCCTTGGAGTGGGACATGGCCAACAGGAAGACGACGGTG
TTAAAGAGCACCACATGGAAGGACATCCAGAGGCTGCCCGGCATGGTGGT
CAGAATGATCCAACGGATGACCACATAGTCCGCGTACAGAACTGCTCCGT
AGGTGACTACCAAGCAGGCGATGCCACAGGGATCTCGGATAAAAAACATG
TCGACTGA
BS01448.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6627-PA | 831 | Dnz1-RA | 5..831 | 845..19 | 4135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 02:56:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 1949 | CG6627-RA | 367..1197 | 849..19 | 4140 | 99.9 | Minus |
CG8314-RA | 1280 | CG8314-RA | 536..637 | 511..410 | 180 | 78.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 02:55:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10855654..10856101 | 289..736 | 2240 | 100 | Plus |
2L | 23513712 | 2L | 10855187..10855457 | 19..289 | 1355 | 100 | Plus |
2L | 23513712 | 2L | 10856163..10856278 | 734..849 | 565 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-09 02:55:56 has no hits.
BS01448.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:23 Download gff for
BS01448.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-PA | 1..831 | 19..849 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:28 Download gff for
BS01448.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6627-PA | 1..831 | 19..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-12 06:10:05 Download gff for
BS01448.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 357..1197 | 19..857 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 04:19:56 Download gff for
BS01448.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 357..1197 | 19..857 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 04:19:56 Download gff for
BS01448.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10856163..10856282 | 734..857 | 95 | | Plus |
2L | 10855187..10855457 | 19..289 | 100 | <- | Plus |
2L | 10855655..10856098 | 290..733 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-12 06:10:05 Download gff for
BS01448.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10855187..10855457 | 19..289 | 100 | <- | Plus |
arm_2L | 10855655..10856098 | 290..733 | 100 | <- | Plus |
arm_2L | 10856163..10856282 | 734..857 | 95 | | Plus |
BS01448.5prime Sequence
863 bp (831 high quality bases) assembled on 2005-11-29
> BS01448.5prime
GAAGTTATCAGTCGACATGGTTTTTATCCGAGATCCCTGTGGCATCGCCT
GCTTGGTAGTCACCTACGGAGCAGTTCTGTACGCGGACTATGTGGTCATC
CGTTGGATCATTCTGACCACCATGCCGGGCAGCCTCTGGATGTCCTTCCA
TGTGGTGCTCTTTAACACCGTCGTCTTCCTGTTGGCCATGTCCCACTCCA
AGGCCGTGTTCTCCGATCCAGGCACTGTGCCGCTGCCCGCCAATCGTCTG
GACTTCTCCGACCTGCACACGACCAACAAAAACAATCCTCCGCCCGGTAA
TGGACACAGCAGCGAATGGACCGTGTGCACCCGCTGCGAAACGTATAGGC
CGCCACGCGCCCATCATTGTCGCATCTGCAAGCGGTGCATCCGGCGCATG
GATCACCACTGCCCCTGGATCAACAACTGTGTGGGCGAGCGCAATCAGAA
GTACTTCCTGCAGTTCCTCATCTACGTGGCGCTGCTGTCGCTCTACTCCA
TTGCCCTTATCGTCGGTTCCTGGGTGTGGCCCTGCGAGGAGTGCAGCCAG
AACGTGATCGAAACCCAGTTGCGAATGATTCACTCGGTTATCCTTATGCT
GGTGTCGGCGCTGTTCGGCCTGTTCGTTACGGCCATCATGGTGGACCAGC
TGCATGCGATTCTGTACGACGAGACGGCCGTGGAGGCGATACAGCAGAAG
GGCACCTATCGTCCAAATCGGCGCAAGTACCAGCTGCTGGCGGATGTGTT
CGGACGCGGACATCCGGCGCTGTGGCTGCTGCCCTGCACCAGTCTCAATC
ATGCCTCCCGCTACCATGATACGCCTCTACTGAGCCACGAGGTCTAGCGA
AACTTTCTAGACC
BS01448.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:18:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6627-PA | 831 | Dnz1-RA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:37:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 1949 | CG6627-RA | 367..1197 | 17..847 | 4155 | 100 | Plus |
CG8314-RA | 1280 | CG8314-RA | 536..637 | 355..456 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:37:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10855654..10856101 | 577..130 | 2240 | 100 | Minus |
2L | 23513712 | 2L | 10855187..10855457 | 847..577 | 1355 | 100 | Minus |
2L | 23513712 | 2L | 10856163..10856278 | 132..17 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:37:53 has no hits.
BS01448.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:24 Download gff for
BS01448.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-PA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:30 Download gff for
BS01448.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6627-PA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 09:30:25 Download gff for
BS01448.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 363..1197 | 10..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:21:24 Download gff for
BS01448.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 363..1197 | 10..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:21:24 Download gff for
BS01448.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10855187..10855457 | 577..847 | 100 | <- | Minus |
2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
2L | 10856163..10856282 | 10..132 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 09:30:25 Download gff for
BS01448.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10855187..10855457 | 577..847 | 100 | <- | Minus |
arm_2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
arm_2L | 10856163..10856282 | 10..132 | 97 | | Minus |
BS01448.complete Sequence
865 bp (865 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634613
> BS01448.complete
GAAGTTATCAGTCGACATGGTTTTTATCCGAGATCCCTGTGGCATCGCCT
GCTTGGTAGTCACCTACGGAGCAGTTCTGTACGCGGACTATGTGGTCATC
CGTTGGATCATTCTGACCACCATGCCGGGCAGCCTCTGGATGTCCTTCCA
TGTGGTGCTCTTTAACACCGTCGTCTTCCTGTTGGCCATGTCCCACTCCA
AGGCCGTGTTCTCCGATCCAGGCACTGTGCCGCTGCCCGCCAATCGTCTG
GACTTCTCCGACCTGCACACGACCAACAAAAACAATCCTCCGCCCGGTAA
TGGACACAGCAGCGAATGGACCGTGTGCACCCGCTGCGAAACGTATAGGC
CGCCACGCGCCCATCATTGTCGCATCTGCAAGCGGTGCATCCGGCGCATG
GATCACCACTGCCCCTGGATCAACAACTGTGTGGGCGAGCGCAATCAGAA
GTACTTCCTGCAGTTCCTCATCTACGTGGCGCTGCTGTCGCTCTACTCCA
TTGCCCTTATCGTCGGTTCCTGGGTGTGGCCCTGCGAGGAGTGCAGCCAG
AACGTGATCGAAACCCAGTTGCGAATGATTCACTCGGTTATCCTTATGCT
GGTGTCGGCGCTGTTCGGCCTGTTCGTTACGGCCATCATGGTGGACCAGC
TGCATGCGATTCTGTACGACGAGACGGCCGTGGAGGCGATACAGCAGAAG
GGCACCTATCGTCCAAATCGGCGCAAGTACCAGCTGCTGGCGGATGTGTT
CGGACGCGGACATCCGGCGCTGTGGCTGCTGCCCTGCACCAGTCTCAATC
ATGCCTCCCGCTACCATGATACGCCTCTACTGAGCCACGAGGTCTAGCGA
AGCTTTCTAGACCAT
BS01448.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:48:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 831 | CG6627-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
CG8314-RA | 882 | CG8314-PA | 396..497 | 355..456 | 180 | 78.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:48:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-RA | 1949 | CG6627-RA | 367..1197 | 17..847 | 4155 | 100 | Plus |
CG8314-RA | 1280 | CG8314-RA | 536..637 | 355..456 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10855654..10856101 | 577..130 | 2240 | 100 | Minus |
2L | 23513712 | 2L | 10855187..10855457 | 847..577 | 1355 | 100 | Minus |
2L | 23513712 | 2L | 10856163..10856278 | 132..17 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:48:56 has no hits.
BS01448.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:14 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 1..831 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:11 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 388..1222 | 10..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:16 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 367..1198 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:14 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 388..1222 | 10..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:50 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dnz1-RA | 367..1198 | 17..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:50 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10855185..10855457 | 577..849 | 99 | <- | Minus |
2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
2L | 10856163..10856278 | 17..132 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:16 Download gff for
BS01448.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10855185..10855457 | 577..849 | 99 | <- | Minus |
arm_2L | 10855655..10856098 | 133..576 | 100 | <- | Minus |
arm_2L | 10856163..10856278 | 17..132 | 100 | | Minus |
BS01448.pep Sequence
Translation from 16 to 846
> BS01448.pep
MVFIRDPCGIACLVVTYGAVLYADYVVIRWIILTTMPGSLWMSFHVVLFN
TVVFLLAMSHSKAVFSDPGTVPLPANRLDFSDLHTTNKNNPPPGNGHSSE
WTVCTRCETYRPPRAHHCRICKRCIRRMDHHCPWINNCVGERNQKYFLQF
LIYVALLSLYSIALIVGSWVWPCEECSQNVIETQLRMIHSVILMLVSALF
GLFVTAIMVDQLHAILYDETAVEAIQQKGTYRPNRRKYQLLADVFGRGHP
ALWLLPCTSLNHASRYHDTPLLSHEV*
BS01448.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:51:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dnz1-PA | 276 | CG6627-PA | 1..276 | 1..276 | 1504 | 100 | Plus |
CG8314-PA | 293 | CG8314-PA | 33..287 | 4..267 | 424 | 32.2 | Plus |
CG1407-PB | 338 | CG1407-PB | 10..292 | 5..259 | 250 | 25.1 | Plus |
CG1407-PD | 352 | CG1407-PD | 10..292 | 5..259 | 250 | 25.1 | Plus |
CG1407-PA | 443 | CG1407-PA | 10..292 | 5..259 | 250 | 25.1 | Plus |