Clone BS01466 Report

Search the DGRC for BS01466

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:14
Well:66
Vector:pDNR-Dual
Associated Gene/Transcriptobsolete transcript model
Protein status:BS01466.pep:
Sequenced Size:16

Clone Sequence Records

BS01466.3prime Sequence

831 bp (830 high quality bases) assembled on 2005-11-29

> BS01466.3prime
ATGGTCTAGAAAGCTTCGTTACCTTTCTGGTGGCTTGATCGATAGGCATC
TGGCCGTGGTGCAGTCCCTGTAGAGGATGTCGAAGTCCTTGCAGCAGAGC
AACTTGCAGCGATTGACGCCCGGCTGGATGGCGCCCAAGCCGCGTAATAT
GCGCACCTGTTCCACATTGCAGACGAGCGGTACGATGTCAAGGCGCTTTA
GTTTGGTATAAACCGTATGCAGACCGCCGACCAAGTGCTTCAGGAAGAGC
TCGAAGGCCTGCGGCAGGCAGAGCATCGTTTCGTTGCTAATTATGAATGC
GGCGACCTTCTGACCCCGGTACTCCACCAGCTTGCACTCATTGGCACTGG
GATCCGAGGTGGAGATCGGCGGCGGTGAGTTGTACGACCTTGGAGGCACA
TGGTGATGGGCGGCGGCCATCAGTTCCAAGGGGGAGGCATGGTGCATCAT
CTGCAGGGAGTTGAGGAGCCCCAGCGAATGGGGCGGCAGTCCATGGGGCA
TTCTGGGCGGTAGGCCCGTCGGCAGTCCGTTGCCCGATGGCATTCCATGT
GGCGGGGGGCTGAGCTGATGGTGTTGCTGCTGCTGCTGTTGCTGCTGCTG
TTGTTGCTGCTGTTGCTGCATCTGCTGCATCATGGAGTGGTTGAGGGAGC
TCACCGGACTGACGGCACTGGGATGGCGACTTGGTGAACTGGCCGGTGAG
CAACTGGATCCTCGTCCTGTGTGCGAGCTCCGTCCATTTGGACGATCCTC
GTTGGCTCCACGCGAACTGTTGCTACCGTCGCGTCCATTGTGCTGCTGCT
GTTGCTGCTGGGCTGCTGCGGCTGCCGCTGC

BS01466.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:18:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG4952-PE 3246 dac-RE 154..962 831..23 4020 99.8 Minus
CG4952-PD 3225 dac-RD 154..962 831..23 4020 99.8 Minus
CG4952-PB 3246 dac-RB 154..962 831..23 4020 99.8 Minus
CG4952-PF 3219 dac-RF 154..962 831..23 4020 99.8 Minus
CG4952-PG 3192 dac-RG 154..936 831..49 3890 99.8 Minus
CG4952-PA 3219 dac-RA 154..935 831..50 3885 99.8 Minus
CG4952-PC 3198 dac-RC 154..935 831..50 3885 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
dac-RF 4955 CG4952-RF 781..1589 831..23 4030 99.9 Minus
dac-RB 4982 CG4952-RB 781..1589 831..23 4030 99.9 Minus
dac-RD 4961 CG4952-RD 781..1589 831..23 4030 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:24:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16483808..16484589 50..831 3895 99.9 Plus
Blast to na_te.dros performed on 2015-02-10 17:24:06 has no hits.

BS01466.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:44 Download gff for BS01466.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4952-PF 154..966 17..831 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:55 Download gff for BS01466.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4952-PD 154..962 23..831 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:09:27 Download gff for BS01466.3prime
Subject Subject Range Query Range Percent Splice Strand
dac-RD 781..1589 23..831 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:08:40 Download gff for BS01466.3prime
Subject Subject Range Query Range Percent Splice Strand
dac-RD 781..1589 23..831 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:08:40 Download gff for BS01466.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 16483808..16484589 50..831 99   Plus
2L 16481521..16481551 19..49 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:09:27 Download gff for BS01466.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16481521..16481551 19..49 100 <- Plus
arm_2L 16483808..16484589 50..831 99   Plus

BS01466.5prime Sequence

860 bp (739 high quality bases) assembled on 2005-11-29

> BS01466.5prime
GAAGTTATCAGTCGACATGGATTCTGTGACAAGTGAACAGAGTGAAAATA
ACAACAATAAAGCGGGCGCAATAAATAACAATATTAATAGTGGTATTGAA
AGAGCCGCGGGCAATATGAACACCACCGCCATGTTGATGCATCACCAGCA
GCAGCAGCAGGCAGCCGCAGCAGCGGCAGCCGCAGCAGCCCAGCAGCAAC
AGCAGCAGCACAATGGACGCGACGGTAGCAACAGTTCGCGTGGAGCCAAC
GAGGATCGTCCAAATGGACGGAGCTCGCACACAGGACGAGGATCCAGTTG
CTCACCGGCCAGTTCACCAAGTCGCCATCCCAGTGCCGTCAGTCCGGTGA
GCTCCCTCAACCACTCCATGATGCAGCAGATGCAGCAACAGCAGCAACAA
CAGCAGCAGCAACAGCAGCAGCAGCAACACCATCAGCTCAGCCCCCCGCC
ACATGGAATGCCATCGGGCAACGGACTGCCGACGGGCCTACCGCCCAGAA
TGCCCCATGGACTGCCGCCCCATTCGCTGGGGCTCCTCAACTCCCTGCAG
ATGATGCACCATGCCTCCCCCTTGGAACTGATGGCCGCCGCCCATCACCA
TGTGCCTCCAAGGTCGTACAACTCACCGCCGCCGATCTCCACCTCGGATC
CCAGTGCCAATGAGTGCAAGCTGGTGGAGTACCGGGGTCAGAAGGTCGCC
GCATTCATAATTAGCAACGAAACGATGCTCTGCCTGCCGCANGCCTTCGA
GCTCTTCCTGAAGCACTTGGTCGGCGGTCTGCATACGGTTTATACCAAAC
TAAAGCGCCTTGACATCGTACCGCTCGTCTGCAATGTGGAACAGGTGCGC
ATATTACGCG

BS01466.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:18:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG4952-PE 3246 dac-RE 1..844 17..860 4176 99.7 Plus
CG4952-PD 3225 dac-RD 1..844 17..860 4176 99.7 Plus
CG4952-PA 3219 dac-RA 1..844 17..860 4176 99.7 Plus
CG4952-PB 3246 dac-RB 1..844 17..860 4176 99.7 Plus
CG4952-PF 3219 dac-RF 1..844 17..860 4176 99.7 Plus
CG4952-PG 3192 dac-RG 1..844 17..860 4176 99.7 Plus
CG4952-PC 3198 dac-RC 1..844 17..860 4176 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
dac-RC 4934 CG4952-RC 628..1471 17..860 4194 99.8 Plus
dac-RG 4928 CG4952-RG 628..1471 17..860 4194 99.8 Plus
dac-RF 4955 CG4952-RF 628..1471 17..860 4194 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16483899..16484742 860..17 4194 99.8 Minus
Blast to na_te.dros performed on 2015-02-12 20:00:21 has no hits.

BS01466.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:46 Download gff for BS01466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4952-PA 1..844 17..860 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:56 Download gff for BS01466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4952-PC 1..844 17..860 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:23:36 Download gff for BS01466.5prime
Subject Subject Range Query Range Percent Splice Strand
dac-RF 625..1471 10..860 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:28:20 Download gff for BS01466.5prime
Subject Subject Range Query Range Percent Splice Strand
dac-RF 625..1471 10..860 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:28:20 Download gff for BS01466.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16483899..16484745 10..860 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:23:36 Download gff for BS01466.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16483899..16484745 10..860 99   Minus

BS01466.complete Sequence

1000 bp (1000 high quality bases) assembled on 2005-06-23

> BS01466.complete
GAAGTTATCAGTCGACATGGATTCTGTGACAAGTGAACAGAGTGAAAATA
ACAACAATAAAGCGGGCGCAATAAATAACAATATTAATAGTGGTATTGAA
AGAGCCGCGGGCAATATGAACACCACCGCCATGTTGATGCATCACCAGCA
GCAGCAGCAGGCAGCCGCAGCAGCGGCAGCCGCAGCAGCCCAGCAGCAAC
AGCAGCAGCACAATGGACGCGACGGTAGCAACAGTTCGCGTGGAGCCAAC
GAGGATCGTCCAAATGGACGGAGCTCGCACACAGGACGAGGATCCAGTTG
CTCACCGGCCAGTTCACCAAGTCGCCATCCCAGTGCCGTCAGTCCGGTGA
GCTCCCTCAACCACTCCATGATGCAGCAGATGCAGCAACAGCAGCAACAA
CAGCAGCAGCAACAGCAGCAGCAGCAACACCATCAGCTCAGCCCCCCGCC
ACATGGAATGCCATCGGGCAACGGACTGCCGACGGGCCTACCGCCCAGAA
TGCCCCATGGACTGCCGCCCCATTCGCTGGGGCTCCTCAACTCCCTGCAG
ATGATGCACCATGCCTCCCCCTTGGAACTGATGGCCGCCGCCCATCACCA
TGTGCCTCCAAGGTCGTACAACTCACCGCCGCCGATCTCCACCTCGGATC
CCAGTGCCAATGAGTGCAAGCTGGTGGAGTACCGGGGTCAGAAGGTCGCC
GCATTCATAATTAGCAACGAAACGATGCTCTGCCTGCCGCAGGCCTTCGA
GCTCTTCCTGAAGCACTTGGTCGGCGGTCTGCATACGGTTTATACCAAAC
TAAAGCGCCTTGACATCGTACCGCTCGTCTGCAATGTGGAACAGGTGCGC
ATATTACGCGGCTTGGGCGCCATCCAGCCGGGCGTCAATCGCTGCAAGTT
GCTCTGCTGCAAGGACTTCGACATCCTCTACAGGGACTGCACCACGGCCA
GATGCCTATCGATCAAGCCACCAGAAAGGTAACGAAGCTTTCTAGACCAT

BS01466.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:36:42
Subject Length Description Subject Range Query Range Score Percent Strand
dac-RF 3219 CG4952-PF 1..962 17..978 4795 99.9 Plus
dac-RB 3246 CG4952-PB 1..962 17..978 4795 99.9 Plus
dac-RD 3225 CG4952-PD 1..962 17..978 4795 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
dac-RF 4955 CG4952-RF 628..1589 17..978 4795 99.9 Plus
dac-RB 4982 CG4952-RB 628..1589 17..978 4795 99.9 Plus
dac-RD 4961 CG4952-RD 628..1589 17..978 4795 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:36:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16483808..16484742 951..17 4660 99.9 Minus
Blast to na_te.dros performed on 2014-11-27 08:36:41 has no hits.

BS01466.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:03 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
dac-RB 1..969 17..989 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:57 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
dac-RB 611..1582 10..989 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:37 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
dac-RD 628..1592 17..984 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:03 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
dac-RB 611..1582 10..989 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:12 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
dac-RD 628..1592 17..984 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:12 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16481518..16481551 952..984 94 <- Minus
2L 16483808..16484742 17..951 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:37 Download gff for BS01466.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16481518..16481551 952..984 94 <- Minus
arm_2L 16483808..16484742 17..951 99   Minus

BS01466.pep Sequence

Translation from 16 to 981

> BS01466.pep
MDSVTSEQSENNNNKAGAINNNINSGIERAAGNMNTTAMLMHHQQQQQAA
AAAAAAAAQQQQQQHNGRDGSNSSRGANEDRPNGRSSHTGRGSSCSPASS
PSRHPSAVSPVSSLNHSMMQQMQQQQQQQQQQQQQQQHHQLSPPPHGMPS
GNGLPTGLPPRMPHGLPPHSLGLLNSLQMMHHASPLELMAAAHHHVPPRS
YNSPPPISTSDPSANECKLVEYRGQKVAAFIISNETMLCLPQAFELFLKH
LVGGLHTVYTKLKRLDIVPLVCNVEQVRILRGLGAIQPGVNRCKLLCCKD
FDILYRDCTTARCLSIKPPER*

BS01466.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
dac-PF 1072 CG4952-PF 1..321 1..321 1700 100 Plus
dac-PD 1074 CG4952-PD 1..320 1..320 1695 100 Plus
dac-PB 1081 CG4952-PB 1..320 1..320 1695 100 Plus
dac-PC 1065 CG4952-PC 1..321 1..321 1658 97.8 Plus
dac-PG 1063 CG4952-PG 1..319 1..321 1654 98.1 Plus