Clone Sequence Records
BS01466.3prime Sequence
831 bp (830 high quality bases) assembled on 2005-11-29
> BS01466.3prime
ATGGTCTAGAAAGCTTCGTTACCTTTCTGGTGGCTTGATCGATAGGCATC
TGGCCGTGGTGCAGTCCCTGTAGAGGATGTCGAAGTCCTTGCAGCAGAGC
AACTTGCAGCGATTGACGCCCGGCTGGATGGCGCCCAAGCCGCGTAATAT
GCGCACCTGTTCCACATTGCAGACGAGCGGTACGATGTCAAGGCGCTTTA
GTTTGGTATAAACCGTATGCAGACCGCCGACCAAGTGCTTCAGGAAGAGC
TCGAAGGCCTGCGGCAGGCAGAGCATCGTTTCGTTGCTAATTATGAATGC
GGCGACCTTCTGACCCCGGTACTCCACCAGCTTGCACTCATTGGCACTGG
GATCCGAGGTGGAGATCGGCGGCGGTGAGTTGTACGACCTTGGAGGCACA
TGGTGATGGGCGGCGGCCATCAGTTCCAAGGGGGAGGCATGGTGCATCAT
CTGCAGGGAGTTGAGGAGCCCCAGCGAATGGGGCGGCAGTCCATGGGGCA
TTCTGGGCGGTAGGCCCGTCGGCAGTCCGTTGCCCGATGGCATTCCATGT
GGCGGGGGGCTGAGCTGATGGTGTTGCTGCTGCTGCTGTTGCTGCTGCTG
TTGTTGCTGCTGTTGCTGCATCTGCTGCATCATGGAGTGGTTGAGGGAGC
TCACCGGACTGACGGCACTGGGATGGCGACTTGGTGAACTGGCCGGTGAG
CAACTGGATCCTCGTCCTGTGTGCGAGCTCCGTCCATTTGGACGATCCTC
GTTGGCTCCACGCGAACTGTTGCTACCGTCGCGTCCATTGTGCTGCTGCT
GTTGCTGCTGGGCTGCTGCGGCTGCCGCTGC
BS01466.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:18:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4952-PE | 3246 | dac-RE | 154..962 | 831..23 | 4020 | 99.8 | Minus |
CG4952-PD | 3225 | dac-RD | 154..962 | 831..23 | 4020 | 99.8 | Minus |
CG4952-PB | 3246 | dac-RB | 154..962 | 831..23 | 4020 | 99.8 | Minus |
CG4952-PF | 3219 | dac-RF | 154..962 | 831..23 | 4020 | 99.8 | Minus |
CG4952-PG | 3192 | dac-RG | 154..936 | 831..49 | 3890 | 99.8 | Minus |
CG4952-PA | 3219 | dac-RA | 154..935 | 831..50 | 3885 | 99.8 | Minus |
CG4952-PC | 3198 | dac-RC | 154..935 | 831..50 | 3885 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:24:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dac-RF | 4955 | CG4952-RF | 781..1589 | 831..23 | 4030 | 99.9 | Minus |
dac-RB | 4982 | CG4952-RB | 781..1589 | 831..23 | 4030 | 99.9 | Minus |
dac-RD | 4961 | CG4952-RD | 781..1589 | 831..23 | 4030 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:24:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16483808..16484589 | 50..831 | 3895 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:24:06 has no hits.
BS01466.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:44 Download gff for
BS01466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-PF | 154..966 | 17..831 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:55 Download gff for
BS01466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-PD | 154..962 | 23..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 10:09:27 Download gff for
BS01466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RD | 781..1589 | 23..831 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:08:40 Download gff for
BS01466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RD | 781..1589 | 23..831 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:08:40 Download gff for
BS01466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16483808..16484589 | 50..831 | 99 | | Plus |
2L | 16481521..16481551 | 19..49 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 10:09:27 Download gff for
BS01466.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16481521..16481551 | 19..49 | 100 | <- | Plus |
arm_2L | 16483808..16484589 | 50..831 | 99 | | Plus |
BS01466.5prime Sequence
860 bp (739 high quality bases) assembled on 2005-11-29
> BS01466.5prime
GAAGTTATCAGTCGACATGGATTCTGTGACAAGTGAACAGAGTGAAAATA
ACAACAATAAAGCGGGCGCAATAAATAACAATATTAATAGTGGTATTGAA
AGAGCCGCGGGCAATATGAACACCACCGCCATGTTGATGCATCACCAGCA
GCAGCAGCAGGCAGCCGCAGCAGCGGCAGCCGCAGCAGCCCAGCAGCAAC
AGCAGCAGCACAATGGACGCGACGGTAGCAACAGTTCGCGTGGAGCCAAC
GAGGATCGTCCAAATGGACGGAGCTCGCACACAGGACGAGGATCCAGTTG
CTCACCGGCCAGTTCACCAAGTCGCCATCCCAGTGCCGTCAGTCCGGTGA
GCTCCCTCAACCACTCCATGATGCAGCAGATGCAGCAACAGCAGCAACAA
CAGCAGCAGCAACAGCAGCAGCAGCAACACCATCAGCTCAGCCCCCCGCC
ACATGGAATGCCATCGGGCAACGGACTGCCGACGGGCCTACCGCCCAGAA
TGCCCCATGGACTGCCGCCCCATTCGCTGGGGCTCCTCAACTCCCTGCAG
ATGATGCACCATGCCTCCCCCTTGGAACTGATGGCCGCCGCCCATCACCA
TGTGCCTCCAAGGTCGTACAACTCACCGCCGCCGATCTCCACCTCGGATC
CCAGTGCCAATGAGTGCAAGCTGGTGGAGTACCGGGGTCAGAAGGTCGCC
GCATTCATAATTAGCAACGAAACGATGCTCTGCCTGCCGCANGCCTTCGA
GCTCTTCCTGAAGCACTTGGTCGGCGGTCTGCATACGGTTTATACCAAAC
TAAAGCGCCTTGACATCGTACCGCTCGTCTGCAATGTGGAACAGGTGCGC
ATATTACGCG
BS01466.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:18:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4952-PE | 3246 | dac-RE | 1..844 | 17..860 | 4176 | 99.7 | Plus |
CG4952-PD | 3225 | dac-RD | 1..844 | 17..860 | 4176 | 99.7 | Plus |
CG4952-PA | 3219 | dac-RA | 1..844 | 17..860 | 4176 | 99.7 | Plus |
CG4952-PB | 3246 | dac-RB | 1..844 | 17..860 | 4176 | 99.7 | Plus |
CG4952-PF | 3219 | dac-RF | 1..844 | 17..860 | 4176 | 99.7 | Plus |
CG4952-PG | 3192 | dac-RG | 1..844 | 17..860 | 4176 | 99.7 | Plus |
CG4952-PC | 3198 | dac-RC | 1..844 | 17..860 | 4176 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:00:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dac-RC | 4934 | CG4952-RC | 628..1471 | 17..860 | 4194 | 99.8 | Plus |
dac-RG | 4928 | CG4952-RG | 628..1471 | 17..860 | 4194 | 99.8 | Plus |
dac-RF | 4955 | CG4952-RF | 628..1471 | 17..860 | 4194 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 20:00:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16483899..16484742 | 860..17 | 4194 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 20:00:21 has no hits.
BS01466.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:46 Download gff for
BS01466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-PA | 1..844 | 17..860 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:17:56 Download gff for
BS01466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-PC | 1..844 | 17..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:23:36 Download gff for
BS01466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RF | 625..1471 | 10..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:28:20 Download gff for
BS01466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RF | 625..1471 | 10..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 01:28:20 Download gff for
BS01466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16483899..16484745 | 10..860 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:23:36 Download gff for
BS01466.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16483899..16484745 | 10..860 | 99 | | Minus |
BS01466.complete Sequence
1000 bp (1000 high quality bases) assembled on 2005-06-23
> BS01466.complete
GAAGTTATCAGTCGACATGGATTCTGTGACAAGTGAACAGAGTGAAAATA
ACAACAATAAAGCGGGCGCAATAAATAACAATATTAATAGTGGTATTGAA
AGAGCCGCGGGCAATATGAACACCACCGCCATGTTGATGCATCACCAGCA
GCAGCAGCAGGCAGCCGCAGCAGCGGCAGCCGCAGCAGCCCAGCAGCAAC
AGCAGCAGCACAATGGACGCGACGGTAGCAACAGTTCGCGTGGAGCCAAC
GAGGATCGTCCAAATGGACGGAGCTCGCACACAGGACGAGGATCCAGTTG
CTCACCGGCCAGTTCACCAAGTCGCCATCCCAGTGCCGTCAGTCCGGTGA
GCTCCCTCAACCACTCCATGATGCAGCAGATGCAGCAACAGCAGCAACAA
CAGCAGCAGCAACAGCAGCAGCAGCAACACCATCAGCTCAGCCCCCCGCC
ACATGGAATGCCATCGGGCAACGGACTGCCGACGGGCCTACCGCCCAGAA
TGCCCCATGGACTGCCGCCCCATTCGCTGGGGCTCCTCAACTCCCTGCAG
ATGATGCACCATGCCTCCCCCTTGGAACTGATGGCCGCCGCCCATCACCA
TGTGCCTCCAAGGTCGTACAACTCACCGCCGCCGATCTCCACCTCGGATC
CCAGTGCCAATGAGTGCAAGCTGGTGGAGTACCGGGGTCAGAAGGTCGCC
GCATTCATAATTAGCAACGAAACGATGCTCTGCCTGCCGCAGGCCTTCGA
GCTCTTCCTGAAGCACTTGGTCGGCGGTCTGCATACGGTTTATACCAAAC
TAAAGCGCCTTGACATCGTACCGCTCGTCTGCAATGTGGAACAGGTGCGC
ATATTACGCGGCTTGGGCGCCATCCAGCCGGGCGTCAATCGCTGCAAGTT
GCTCTGCTGCAAGGACTTCGACATCCTCTACAGGGACTGCACCACGGCCA
GATGCCTATCGATCAAGCCACCAGAAAGGTAACGAAGCTTTCTAGACCAT
BS01466.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:36:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dac-RF | 3219 | CG4952-PF | 1..962 | 17..978 | 4795 | 99.9 | Plus |
dac-RB | 3246 | CG4952-PB | 1..962 | 17..978 | 4795 | 99.9 | Plus |
dac-RD | 3225 | CG4952-PD | 1..962 | 17..978 | 4795 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:36:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dac-RF | 4955 | CG4952-RF | 628..1589 | 17..978 | 4795 | 99.9 | Plus |
dac-RB | 4982 | CG4952-RB | 628..1589 | 17..978 | 4795 | 99.9 | Plus |
dac-RD | 4961 | CG4952-RD | 628..1589 | 17..978 | 4795 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:36:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16483808..16484742 | 951..17 | 4660 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:36:41 has no hits.
BS01466.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:03 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RB | 1..969 | 17..989 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:57 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RB | 611..1582 | 10..989 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:37 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RD | 628..1592 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:03 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RB | 611..1582 | 10..989 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:23:12 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RD | 628..1592 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:23:12 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16481518..16481551 | 952..984 | 94 | <- | Minus |
2L | 16483808..16484742 | 17..951 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:37 Download gff for
BS01466.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16481518..16481551 | 952..984 | 94 | <- | Minus |
arm_2L | 16483808..16484742 | 17..951 | 99 | | Minus |
BS01466.pep Sequence
Translation from 16 to 981
> BS01466.pep
MDSVTSEQSENNNNKAGAINNNINSGIERAAGNMNTTAMLMHHQQQQQAA
AAAAAAAAQQQQQQHNGRDGSNSSRGANEDRPNGRSSHTGRGSSCSPASS
PSRHPSAVSPVSSLNHSMMQQMQQQQQQQQQQQQQQQHHQLSPPPHGMPS
GNGLPTGLPPRMPHGLPPHSLGLLNSLQMMHHASPLELMAAAHHHVPPRS
YNSPPPISTSDPSANECKLVEYRGQKVAAFIISNETMLCLPQAFELFLKH
LVGGLHTVYTKLKRLDIVPLVCNVEQVRILRGLGAIQPGVNRCKLLCCKD
FDILYRDCTTARCLSIKPPER*
BS01466.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:49:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dac-PF | 1072 | CG4952-PF | 1..321 | 1..321 | 1700 | 100 | Plus |
dac-PD | 1074 | CG4952-PD | 1..320 | 1..320 | 1695 | 100 | Plus |
dac-PB | 1081 | CG4952-PB | 1..320 | 1..320 | 1695 | 100 | Plus |
dac-PC | 1065 | CG4952-PC | 1..321 | 1..321 | 1658 | 97.8 | Plus |
dac-PG | 1063 | CG4952-PG | 1..319 | 1..321 | 1654 | 98.1 | Plus |