Clone Sequence Records
BS01472.3prime Sequence
888 bp (806 high quality bases) assembled on 2005-11-29
> BS01472.3prime
ATGGTCTAGAAAGCTTCGCTACCAGGGCCGCCAGGGCTGCTCCTCCTCCT
TGATCTGCTTCTTGATCACCAGCGACAGGGGCTGCTGCTCCATTGGCACG
CGCTGGATGACCGATGGCTTGATGTCCATGGGCTCGTAGCTAGAGTTGGC
CGGACTGGGCGGGGCGTAGCTACAGCTGCTGCTGCTTCCGGGCGCCGACT
CGTATCCGGCGGAGGAGTGCGAGCTGGCGGATCCGGTGCTGGCTGTACGC
TGGGGCATGCTGACCAACATGGGTTGCTGTTGTGCTGCTGCTGCGGCCGC
TGCTGCTGCTGCGACGGCGAGTTGCTGCTGCTGCTGTTGGTGCTGCAGCA
ACTGTTGCTGCTGCTGCTGGGGCAGGCTCTGGGGCAACACGAGGGCAATG
CTACCGTTGGGCAGCTTGGTGGGGATCACCTGCATGCCATTGGGCAGAAA
GTAACCGCTGGCCGTCTGCTGGATACCAAAGAGGTAGGGTGCCGCTGCTC
CCTGCTGGCTATCCTGCTCCGGCGAGCTGGGCGGCGAGGGCAGCATCTGG
GCGTGGATGGACTGCTGTTGCTGCTGGCGCTGCTGCTGGTGCAGCTCTGT
CTTAACGCCATTGATGCAGTTGCTCAGGTGCTGTAGCAGGCGACGACGCT
GGGCGGGCTCGATGCCGGGAAAGCGGCTAACCTCGTTCACACAGTCGGCG
AATCCGGCCTTGAATTTGTTCACAATCTTGGGATCGGCGGCCTGCTGCAT
GGCTGCCTGCTGGCGCTGCAGCTCCTGCAGATGCTTTACTGTCTTCTCCA
GAATGTCGGGCTTTTCCAATTTGGAGTGGCGAGCCGGGTCTTTTTTTGGT
GGCATCCAGAATCAGAGTCTTGAGTTCATTGAGACAGT
BS01472.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6494-PA | 1014 | h-RA | 187..1014 | 846..19 | 4115 | 99.8 | Minus |
CG6494-PB | 1014 | h-RB | 187..1014 | 846..19 | 4115 | 99.8 | Minus |
CG6494-PA | 1014 | h-RA | 146..192 | 888..842 | 235 | 100 | Minus |
CG6494-PB | 1014 | h-RB | 146..192 | 888..842 | 235 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:24:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
h-RB | 2335 | CG6494-RB | 637..1505 | 888..19 | 4310 | 99.8 | Minus |
h-RA | 2139 | CG6494-RA | 441..1309 | 888..19 | 4310 | 99.8 | Minus |
dpn-RA | 2036 | CG8704-RA | 455..585 | 888..757 | 260 | 80.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:24:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8677605..8678423 | 837..19 | 4080 | 99.9 | Minus |
3L | 28110227 | 3L | 8677418..8677464 | 888..842 | 235 | 100 | Minus |
2R | 25286936 | 2R | 8230422..8230502 | 757..837 | 195 | 82.7 | Plus |
Blast to na_te.dros performed 2015-02-10 23:24:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2825..2930 | 385..274 | 186 | 66.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..7079 | 652..284 | 168 | 55.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6868 | 651..559 | 167 | 67 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2665 | 639..301 | 162 | 55.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6825 | 651..563 | 154 | 67.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6847 | 651..562 | 150 | 66.7 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1051..1152 | 660..563 | 147 | 65.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1516..1583 | 635..562 | 140 | 70.3 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1053..1129 | 641..562 | 140 | 67.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2386 | 633..563 | 138 | 71.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2372 | 624..562 | 132 | 71.9 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1060..1141 | 640..562 | 131 | 67.1 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1068..1109 | 602..561 | 129 | 78.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2473 | 651..563 | 128 | 63 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6771 | 600..563 | 120 | 82.1 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1081..1120 | 600..562 | 116 | 80 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7392..7532 | 596..455 | 111 | 58.6 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1055..1087 | 594..562 | 111 | 81.8 | Minus |
BS01472.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:53 Download gff for
BS01472.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6494-PB | 146..1014 | 19..888 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:05 Download gff for
BS01472.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6494-PB | 146..1014 | 19..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:41:28 Download gff for
BS01472.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RA | 441..1309 | 19..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:45:06 Download gff for
BS01472.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RA | 441..1309 | 19..888 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:45:06 Download gff for
BS01472.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8677418..8677467 | 838..888 | 98 | -> | Minus |
3L | 8677605..8678423 | 19..837 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:41:28 Download gff for
BS01472.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8670518..8670567 | 838..888 | 98 | -> | Minus |
arm_3L | 8670705..8671523 | 19..837 | 99 | | Minus |
BS01472.5prime Sequence
838 bp (815 high quality bases) assembled on 2005-11-29
> BS01472.5prime
GAAGTTATCAGTCGACATGGTTACCGGCGTAACAGCAGCCAACATGACCA
ACGTTCTGGGCACCGCCGTTGTGCCGGCCCAGCTCAAGGAGACGCCGCTC
AAAAGTGACCGTCGGTCGAACAAGCCCATCATGGAGAAACGCCGACGTGC
CCGTATTAACAACTGTCTCAATGAACTCAAGACTCTGATTCTGGATGCCA
CCAAAAAAGACCCGGCTCGCCACTCCAAATTGGAAAAGGCCGACATTCTG
GAGAAGACAGTAAAGCATCTGCAGGAGCTGCAGCGCCAGCAGGCAGCCAT
GCAGCAGGCCGCCGATCCCAAGATTGTGAACAAATTCAAGGCCGGATTCG
CCGACTGTGTGAACGAGGTTAGCCGCTTTCCCGGCATCGAGCCCGCCCAG
CGTCGTCGCCTGCTACAGCACCTGAGCAACTGCATCAATGGCGTTAAGAC
AGAGCTGCACCAGCAGCAGCGCCAGCAGCAACAGCAGTCCATCCACGCCC
AGATGCTGCCCTCGCCGCCCAGCTCGCCGGAGCAGGATAGCCAGCAGGGA
GCAGCGGCACCCTACCTCTTTGGTATCCAGCAGACGGCCAGCGGTTACTT
TCTGCCCAATGGCATGCAGGTGATCCCCACCAAGCTGCCCAACGGTAGCA
TTGCCCTCGTGTTGCCCCAGAGCCTGCCCCAGCAGCAGCAGCAACAGTTG
CTGCAGCACCAACAGCAGCAGCAGCAACTCGCCGTCGCAGCAGCAGCAGC
GGCCGCAGCAGCAGCACAACAGCAACCCATGTTGGTCAGCATGCCCCAGC
GTACAGCCAGCACCGGATCCCGCAGCTCGCACTCCTCC
BS01472.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6494-PA | 1014 | h-RA | 1..822 | 17..838 | 4060 | 99.7 | Plus |
CG6494-PB | 1014 | h-RB | 1..822 | 17..838 | 4060 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:12:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
h-RB | 2335 | CG6494-RB | 488..1313 | 13..838 | 4085 | 99.6 | Plus |
h-RA | 2139 | CG6494-RA | 292..1117 | 13..838 | 4085 | 99.6 | Plus |
dpn-RA | 2036 | CG8704-RA | 412..585 | 119..292 | 360 | 80.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:12:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8677605..8678231 | 212..838 | 3105 | 99.7 | Plus |
3L | 28110227 | 3L | 8676246..8676348 | 13..115 | 500 | 99 | Plus |
3L | 28110227 | 3L | 8677371..8677467 | 115..211 | 485 | 100 | Plus |
2R | 25286936 | 2R | 8230422..8230502 | 292..212 | 210 | 84 | Minus |
Blast to na_te.dros performed 2015-02-10 21:12:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2825..2930 | 664..775 | 186 | 66.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..7079 | 397..765 | 168 | 55.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6868 | 398..490 | 167 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2665 | 410..748 | 162 | 55.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6825 | 398..486 | 154 | 67.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6847 | 398..487 | 150 | 66.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1051..1152 | 389..486 | 147 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1516..1583 | 414..487 | 140 | 70.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1053..1129 | 408..487 | 140 | 67.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2386 | 416..486 | 138 | 71.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2372 | 425..487 | 132 | 71.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1060..1141 | 409..487 | 131 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1068..1109 | 447..488 | 129 | 78.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2473 | 398..486 | 128 | 63 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6771 | 449..486 | 120 | 82.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1081..1120 | 449..487 | 116 | 80 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7392..7532 | 453..594 | 111 | 58.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1055..1087 | 455..487 | 111 | 81.8 | Plus |
BS01472.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:08:54 Download gff for
BS01472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6494-PB | 1..822 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:06 Download gff for
BS01472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6494-PB | 1..822 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 03:40:50 Download gff for
BS01472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RA | 284..1117 | 6..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:44:12 Download gff for
BS01472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RA | 284..1117 | 6..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:44:12 Download gff for
BS01472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8676238..8676348 | 6..115 | 96 | -> | Plus |
3L | 8677372..8677467 | 116..211 | 100 | -> | Plus |
3L | 8677605..8678231 | 212..838 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 03:40:50 Download gff for
BS01472.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8669338..8669448 | 6..115 | 96 | -> | Plus |
arm_3L | 8670472..8670567 | 116..211 | 100 | -> | Plus |
arm_3L | 8670705..8671331 | 212..838 | 99 | | Plus |
BS01472.complete Sequence
1048 bp (1048 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634621
> BS01472.complete
GAAGTTATCAGTCGACATGGTTACCGGCGTAACAGCAGCCAACATGACCA
ACGTTCTGGGCACCGCCGTTGTGCCGGCCCAGCTCAAGGAGACGCCGCTC
AAAAGTGACCGTCGGTCGAACAAGCCCATCATGGAGAAACGCCGACGTGC
CCGTATTAACAACTGTCTCAATGAACTCAAGACTCTGATTCTGGATGCCA
CCAAAAAAGACCCGGCTCGCCACTCCAAATTGGAAAAGGCCGACATTCTG
GAGAAGACAGTAAAGCATCTGCAGGAGCTGCAGCGCCAGCAGGCAGCCAT
GCAGCAGGCCGCCGATCCCAAGATTGTGAACAAATTCAAGGCCGGATTCG
CCGACTGTGTGAACGAGGTTAGCCGCTTTCCCGGCATCGAGCCCGCCCAG
CGTCGTCGCCTGCTACAGCACCTGAGCAACTGCATCAATGGCGTTAAGAC
AGAGCTGCACCAGCAGCAGCGCCAGCAGCAACAGCAGTCCATCCACGCCC
AGATGCTGCCCTCGCCGCCCAGCTCGCCGGAGCAGGATAGCCAGCAGGGA
GCAGCGGCACCCTACCTCTTTGGTATCCAGCAGACGGCCAGCGGTTACTT
TCTGCCCAATGGCATGCAGGTGATCCCCACCAAGCTGCCCAACGGTAGCA
TTGCCCTCGTGTTGCCCCAGAGCCTGCCCCAGCAGCAGCAGCAACAGTTG
CTGCAGCACCAACAGCAGCAGCAGCAACTCGCCGTCGCAGCAGCAGCAGC
GGCCGCAGCAGCAGCACAACAGCAACCCATGTTGGTCAGCATGCCCCAGC
GTACAGCCAGCACCGGATCCGCCAGCTCGCACTCCTCCGCCGGATACGAG
TCGGCGCCCGGAAGCAGCAGCAGCTGTAGCTACGCCCCGCCCAGTCCGGC
CAACTCTAGCTACGAGCCCATGGACATCAAGCCATCGGTCATCCAGCGCG
TGCCAATGGAGCAGCAGCCCCTGTCGCTGGTGATCAAGAAGCAGATCAAG
GAGGAGGAGCAGCCCTGGCGGCCCTGGTAGCGAAGCTTTCTAGACCAT
BS01472.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 02:04:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
h-RB | 1014 | CG6494-PB | 1..1014 | 17..1030 | 5070 | 100 | Plus |
h-RA | 1014 | CG6494-PA | 1..1014 | 17..1030 | 5070 | 100 | Plus |
dpn-RA | 1308 | CG8704-PA | 130..303 | 119..292 | 360 | 80.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:04:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
h-RB | 2335 | CG6494-RB | 488..1505 | 13..1030 | 5075 | 99.9 | Plus |
h-RA | 2139 | CG6494-RA | 292..1309 | 13..1030 | 5075 | 99.9 | Plus |
dpn-RA | 2036 | CG8704-RA | 412..585 | 119..292 | 360 | 80.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 02:04:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8677605..8678423 | 212..1030 | 4095 | 100 | Plus |
3L | 28110227 | 3L | 8676246..8676348 | 13..115 | 500 | 99 | Plus |
3L | 28110227 | 3L | 8677371..8677467 | 115..211 | 485 | 100 | Plus |
2R | 25286936 | 2R | 8230422..8230502 | 292..212 | 210 | 84 | Minus |
Blast to na_te.dros performed 2014-11-27 02:04:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2825..2930 | 664..775 | 186 | 66.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..7079 | 397..765 | 168 | 55.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6868 | 398..490 | 167 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2665 | 410..748 | 162 | 55.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6825 | 398..486 | 154 | 67.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6847 | 398..487 | 150 | 66.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1051..1152 | 389..486 | 147 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1516..1583 | 414..487 | 140 | 70.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1053..1129 | 408..487 | 140 | 67.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2386 | 416..486 | 138 | 71.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2311..2372 | 425..487 | 132 | 71.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1060..1141 | 409..487 | 131 | 67.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1068..1109 | 447..488 | 129 | 78.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2473 | 398..486 | 128 | 63 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6771 | 449..486 | 120 | 82.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1081..1120 | 449..487 | 116 | 80 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 7392..7532 | 453..594 | 111 | 58.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1055..1087 | 455..487 | 111 | 81.8 | Plus |
BS01472.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:35:07 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RB | 1..1014 | 17..1030 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:20:02 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RB | 480..1505 | 6..1030 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:08:51 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RA | 296..1311 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:35:07 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RB | 480..1505 | 6..1030 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:37:00 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
h-RA | 296..1311 | 17..1032 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:37:00 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8676250..8676348 | 17..115 | 100 | -> | Plus |
3L | 8677372..8677467 | 116..211 | 100 | -> | Plus |
3L | 8677605..8678425 | 212..1032 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:08:51 Download gff for
BS01472.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8669350..8669448 | 17..115 | 100 | -> | Plus |
arm_3L | 8670472..8670567 | 116..211 | 100 | -> | Plus |
arm_3L | 8670705..8671525 | 212..1032 | 99 | | Plus |
BS01472.pep Sequence
Translation from 16 to 1029
> BS01472.pep
MVTGVTAANMTNVLGTAVVPAQLKETPLKSDRRSNKPIMEKRRRARINNC
LNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQQAAMQQAAD
PKIVNKFKAGFADCVNEVSRFPGIEPAQRRRLLQHLSNCINGVKTELHQQ
QRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYFLPNGM
QVIPTKLPNGSIALVLPQSLPQQQQQQLLQHQQQQQQLAVAAAAAAAAAA
QQQPMLVSMPQRTASTGSASSHSSAGYESAPGSSSSCSYAPPSPANSSYE
PMDIKPSVIQRVPMEQQPLSLVIKKQIKEEEQPWRPW*
BS01472.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:47:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
h-PB | 337 | CG6494-PB | 1..337 | 1..337 | 1712 | 100 | Plus |
h-PA | 337 | CG6494-PA | 1..337 | 1..337 | 1712 | 100 | Plus |
dpn-PA | 435 | CG8704-PA | 41..231 | 32..219 | 411 | 47 | Plus |
Side-PA | 507 | CG10446-PA | 19..388 | 4..290 | 282 | 27.8 | Plus |
E(spl)mbeta-HLH-PA | 195 | CG14548-PA | 14..179 | 32..182 | 219 | 32.5 | Plus |