Clone Sequence Records
BS01495.3prime Sequence
850 bp (737 high quality bases) assembled on 2005-11-29
> BS01495.3prime
ATGGTCTAGAAAGCTTCGCTATCTGCTCATGATCTCATCGATGGTGAAGC
CCAGCATCCGCTTGGGCTTCTCTGAGCTCGAGGATGACGAGGATAGATCC
AGGACAGGCAGATGCTGTGCCAAATTCTCAGGTTGAGGCGAACTCAATGC
CTGGTTTGGCACCGAATGTGAAGTGGCTGGTGAGGTGGTCACCACCACCT
CCTTGGTGCTCTGCTCGCTGTGGCTCTGGAGGTGACTCTTGAGGTTGGCC
CGCTGGTTGAAGCTCCGCTGGCAGATGGGACACTTGTGCGGACCCTCCTC
CAGATGGGTGACCTTGTGCACGGCCAGGGTGCGCGACTGGCAGAAACCCT
TGCCGCAATCGCTGCACTTGAAGGGCTTGTCCTTGGAGTGGATGTACCGG
TGGTCCCGCAGATGATCCTGTCGCCGGAAGGCTTTGCCGCAGATGTCGCA
GGAGTAAGGCCTCTCGTCCGTGTGGGTTCTCTCATGGATGAGCAGATTGT
ACGACTTGGTGAACTGCCGGTTGCAGTACTTGCAGATGAACTGCTTCTTT
GGCCGACTGCTGCCAGTTGCGCCGCTGGGTACACCACTCGCTCCACCGGC
ACCACCCAGTTTCAGGGTGGGCATGGCTCCGAAGTGGCGACCCATGACCG
CGGCATGCAGACTATGGAGGCCAGCGGGATAGGGACGCACATGATGCGGA
TGTGGGTGAGGGTGGTGCGGATGGCCGTGGTGGTGATGATGGGTGCGGAT
GTTGCTGCTGCTGCTGTTGCTGCTGGTAGATGGCTGCGTTGCCGATCCAG
TGGTTCATCAACTGCTGGTGCACGGCCACGGGATCGGCGCTGGCTGTGGG
BS01495.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3851-PA | 1179 | odd-RA | 456..1179 | 742..19 | 3620 | 100 | Minus |
| CG3851-PA | 1179 | odd-RA | 349..457 | 850..742 | 520 | 99 | Minus |
| CG3242-PA | 1737 | sob-RA | 1174..1314 | 549..409 | 405 | 91.4 | Minus |
| CG10021-PB | 2235 | bowl-RB | 709..914 | 543..338 | 355 | 86.8 | Minus |
| CG10021-PC | 2235 | bowl-RC | 709..914 | 543..338 | 355 | 86.8 | Minus |
| CG10021-PD | 2235 | bowl-RD | 709..914 | 543..338 | 355 | 86.8 | Minus |
| CG10021-PA | 2235 | bowl-RA | 709..914 | 543..338 | 355 | 86.8 | Minus |
| CG17816-PD | 2319 | CG17816-RD | 1844..1877 | 775..742 | 145 | 97 | Minus |
| CG17816-PB | 2637 | CG17816-RB | 2516..2549 | 775..742 | 145 | 97 | Minus |
| CG15470-PA | 1038 | CG15470-RA | 742..769 | 775..748 | 140 | 100 | Minus |
| CG7958-PA | 3408 | tna-RA | 206..233 | 777..750 | 140 | 100 | Minus |
| CG7958-PB | 3450 | tna-RB | 248..275 | 777..750 | 140 | 100 | Minus |
| CG12701-PB | 4791 | CG12701-RB | 509..536 | 780..753 | 140 | 100 | Minus |
| CG12701-PA | 4791 | CG12701-RA | 509..536 | 780..753 | 140 | 100 | Minus |
| CG11895-PA | 10725 | stan-RA | 10376..10403 | 777..750 | 140 | 100 | Minus |
| CG1028-PH | 894 | Antp-RH | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PK | 1086 | Antp-RK | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PG | 1086 | Antp-RG | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PF | 1098 | Antp-RF | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PE | 1098 | Antp-RE | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PD | 1125 | Antp-RD | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PN | 1125 | Antp-RN | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PL | 1137 | Antp-RL | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PI | 1137 | Antp-RI | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PJ | 1137 | Antp-RJ | 327..353 | 776..750 | 135 | 100 | Minus |
| CG1028-PM | 1137 | Antp-RM | 327..353 | 776..750 | 135 | 100 | Minus |
| CG33261-PI | 1704 | Trl-RI | 1395..1421 | 776..750 | 135 | 100 | Minus |
| CG33261-PA | 1749 | Trl-RA | 1395..1421 | 776..750 | 135 | 100 | Minus |
| CG33261-PF | 1749 | Trl-RF | 1395..1421 | 776..750 | 135 | 100 | Minus |
| CG31240-PA | 1839 | repo-RA | 441..467 | 776..750 | 135 | 100 | Minus |
| CG31761-PC | 1899 | bru-2-RC | 277..308 | 775..744 | 135 | 96.8 | Minus |
| CG31761-PA | 1899 | bru-2-RA | 277..308 | 775..744 | 135 | 96.8 | Minus |
| CG31761-PD | 2214 | bru-2-RD | 277..308 | 775..744 | 135 | 96.8 | Minus |
| CG31761-PE | 2682 | bru-2-RE | 277..308 | 775..744 | 135 | 96.8 | Minus |
| CG11641-PA | 2985 | CG11641-RA | 382..413 | 775..744 | 135 | 96.8 | Minus |
| CG13598-PA | 3549 | sba-RA | 1077..1103 | 776..750 | 135 | 100 | Minus |
| CG13598-PB | 4089 | sba-RB | 1077..1103 | 776..750 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:37:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 2347 | CG3851-RA | 747..1577 | 850..19 | 4120 | 99.8 | Minus |
| sob-RA | 2611 | CG3242-RA | 1764..2083 | 549..230 | 820 | 84.1 | Minus |
| bowl-RH | 3435 | CG10021-RH | 1060..1378 | 555..237 | 710 | 81.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3604994..3605824 | 19..850 | 4095 | 99.8 | Plus |
| 2L | 23513712 | 2L | 3578861..3579006 | 404..549 | 535 | 91.1 | Plus |
| 2L | 23513712 | 2L | 3780422..3780581 | 555..396 | 485 | 86.9 | Minus |
| 2L | 23513712 | 2L | 3578541..3578704 | 230..393 | 310 | 79.3 | Plus |
| 2L | 23513712 | 2L | 3781903..3782064 | 398..237 | 225 | 75.9 | Minus |
Blast to na_te.dros performed 2015-02-10 19:37:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 8270..8318 | 801..753 | 128 | 73.5 | Minus |
BS01495.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:18 Download gff for
BS01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-PA | 349..1179 | 19..850 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:36 Download gff for
BS01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3851-PA | 349..1179 | 19..850 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:27:33 Download gff for
BS01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 747..1577 | 19..850 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:44:21 Download gff for
BS01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 747..1577 | 19..850 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:44:21 Download gff for
BS01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3604998..3605824 | 23..850 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:27:33 Download gff for
BS01495.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3604998..3605824 | 23..850 | 99 | | Plus |
BS01495.5prime Sequence
857 bp (781 high quality bases) assembled on 2005-11-29
> BS01495.5prime
GAAGTTATCAGTCGACATGTCTTCCACATCGGCCTCACCCATCAGCAACA
TAACCGTGGATGACGAGCTCAACTTAAGCAGAGAACAAGACTTTGCTGAA
GAGGATTTCATAGTGATCAAGGAGGAGCGCGAGACAAGTCTCTCCCCCAT
GCTGACGCCCCCGCACACGCCCACCGAGGAGCCGCTGAGGAGAGTGCATC
CGGCGATAAGCGAGGAGGCGGTGGCCACCCAGCTGCACATGCGACACATG
GCCCACTACCAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCAGCACCG
CCTGTGGCTGCAGATGCAGCAGCAGCAGCAACAACATCAGGCTCCACAGC
AGTATCCAGTTTATCCCACAGCCAGCGCCGATCCCGTGGCCGTGCACCAG
CAGTTGATGAACCACTGGATCCGCAACGCAGCCATCTACCAGCAGCAACA
GCAGCAGCAGCAACATCCGCACCATCATCACCACCACGGCCATCCGCACC
ACCCTCACCCACATCCGCATCATGTGCGTCCCTATCCCGCTGGCCTCCAT
AGTCTGCATGCCGCGGTCATGGGTCGCCACTTCGGAGCCATGCCCACCCT
GAAACTGGGTGGTGCCGGTGGAGCGAGTGGTGTACCCAGCGGCGCAACTG
GCAGCAGTCGGCCAAAGAAGCAGTTCATCTGCAAGTACTGCAACCGGCAG
TTCACCAAGTCGTACAATCTGCTCATCCATGAGAGAACCCACACGGACGA
GAGGCCTTACTCCTGCGACATCTGCGGCAAAGCCCTCCGGCGACAGGATC
ATCTGCGGGACCACCGGTACATCCACTCCAAGGACAAGCCCTTTCAGTGC
AGCGATT
BS01495.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3851-PA | 1179 | odd-RA | 1..841 | 17..857 | 4130 | 99.6 | Plus |
| CG3242-PA | 1737 | sob-RA | 1174..1289 | 665..780 | 380 | 93.1 | Plus |
| CG10021-PB | 2235 | bowl-RB | 709..872 | 671..834 | 295 | 87.1 | Plus |
| CG10021-PC | 2235 | bowl-RC | 709..872 | 671..834 | 295 | 87.1 | Plus |
| CG10021-PD | 2235 | bowl-RD | 709..872 | 671..834 | 295 | 87.1 | Plus |
| CG10021-PA | 2235 | bowl-RA | 709..872 | 671..834 | 295 | 87.1 | Plus |
| CG17816-PD | 2319 | CG17816-RD | 1844..1877 | 440..473 | 145 | 97 | Plus |
| CG17816-PB | 2637 | CG17816-RB | 2516..2549 | 440..473 | 145 | 97 | Plus |
| CG15470-PA | 1038 | CG15470-RA | 742..769 | 440..467 | 140 | 100 | Plus |
| CG7958-PA | 3408 | tna-RA | 206..233 | 438..465 | 140 | 100 | Plus |
| CG7958-PB | 3450 | tna-RB | 248..275 | 438..465 | 140 | 100 | Plus |
| CG12701-PB | 4791 | CG12701-RB | 509..536 | 435..462 | 140 | 100 | Plus |
| CG12701-PA | 4791 | CG12701-RA | 509..536 | 435..462 | 140 | 100 | Plus |
| CG11895-PA | 10725 | stan-RA | 10376..10403 | 438..465 | 140 | 100 | Plus |
| CG1028-PH | 894 | Antp-RH | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PK | 1086 | Antp-RK | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PG | 1086 | Antp-RG | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PF | 1098 | Antp-RF | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PE | 1098 | Antp-RE | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PD | 1125 | Antp-RD | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PN | 1125 | Antp-RN | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PL | 1137 | Antp-RL | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PI | 1137 | Antp-RI | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PJ | 1137 | Antp-RJ | 327..353 | 439..465 | 135 | 100 | Plus |
| CG1028-PM | 1137 | Antp-RM | 327..353 | 439..465 | 135 | 100 | Plus |
| CG33261-PI | 1704 | Trl-RI | 1395..1421 | 439..465 | 135 | 100 | Plus |
| CG33261-PA | 1749 | Trl-RA | 1395..1421 | 439..465 | 135 | 100 | Plus |
| CG33261-PF | 1749 | Trl-RF | 1395..1421 | 439..465 | 135 | 100 | Plus |
| CG31240-PA | 1839 | repo-RA | 441..467 | 439..465 | 135 | 100 | Plus |
| CG31761-PC | 1899 | bru-2-RC | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG31761-PA | 1899 | bru-2-RA | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG31761-PD | 2214 | bru-2-RD | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG31761-PE | 2682 | bru-2-RE | 277..308 | 440..471 | 135 | 96.8 | Plus |
| CG11641-PA | 2985 | CG11641-RA | 382..413 | 440..471 | 135 | 96.8 | Plus |
| CG13598-PA | 3549 | sba-RA | 1077..1103 | 439..465 | 135 | 100 | Plus |
| CG13598-PB | 4089 | sba-RB | 1077..1103 | 439..465 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 2347 | CG3851-RA | 399..1239 | 17..857 | 4160 | 99.6 | Plus |
| sob-RA | 2611 | CG3242-RA | 1764..1949 | 665..850 | 600 | 88.2 | Plus |
| bowl-RH | 3435 | CG10021-RH | 1060..1244 | 659..843 | 535 | 85.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 08:21:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3605332..3606101 | 857..88 | 3805 | 99.6 | Minus |
| 2L | 23513712 | 2L | 3578861..3579006 | 810..665 | 520 | 90.4 | Minus |
| 2L | 23513712 | 2L | 3780422..3780581 | 659..818 | 470 | 86.2 | Plus |
| 2L | 23513712 | 2L | 3606286..3606358 | 89..17 | 365 | 100 | Minus |
Blast to na_te.dros performed 2015-02-13 08:21:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 1200..1277 | 410..495 | 114 | 65.1 | Plus |
BS01495.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:19 Download gff for
BS01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-PA | 1..841 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:37 Download gff for
BS01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3851-PA | 1..841 | 17..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 11:36:06 Download gff for
BS01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 392..1239 | 9..857 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 10:11:55 Download gff for
BS01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 392..1239 | 9..857 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 10:11:55 Download gff for
BS01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3605332..3606099 | 90..857 | 99 | <- | Minus |
| 2L | 3606286..3606362 | 11..89 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 11:36:06 Download gff for
BS01495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3605332..3606099 | 90..857 | 99 | <- | Minus |
| arm_2L | 3606286..3606362 | 11..89 | 94 | <- | Minus |
BS01495.complete Sequence
1213 bp (1213 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634625
> BS01495.complete
GAAGTTATCAGTCGACATGTCTTCCACATCGGCCTCACCCATCAGCAACA
TAACCGTGGATGACGAGCTCAACTTAAGCAGAGAACAAGACTTTGCTGAA
GAGGATTTCATAGTGATCAAGGAGGAGCGCGAGACAAGTCTCTCCCCCAT
GCTGACGCCCCCGCACACGCCCACCGAGGAGCCGCTGAGGAGAGTGCATC
CGGCGATAAGCGAGGAGGCGGTGGCCACCCAGCTGCACATGCGACACATG
GCCCACTACCAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCAGCACCG
CCTGTGGCTGCAGATGCAGCAGCAGCAGCAACAACATCAGGCTCCACAGC
AGTATCCAGTTTATCCCACAGCCAGCGCCGATCCCGTGGCCGTGCACCAG
CAGTTGATGAACCACTGGATCCGCAACGCAGCCATCTACCAGCAGCAACA
GCAGCAGCAGCAACATCCGCACCATCATCACCACCACGGCCATCCGCACC
ACCCTCACCCACATCCGCATCATGTGCGTCCCTATCCCGCTGGCCTCCAT
AGTCTGCATGCCGCGGTCATGGGTCGCCACTTCGGAGCCATGCCCACCCT
GAAACTGGGTGGTGCCGGTGGAGCGAGTGGTGTACCCAGCGGCGCAACTG
GCAGCAGTCGGCCAAAGAAGCAGTTCATCTGCAAGTACTGCAACCGGCAG
TTCACCAAGTCGTACAATCTGCTCATCCATGAGAGAACCCACACGGACGA
GAGGCCTTACTCCTGCGACATCTGCGGCAAAGCCTTCCGGCGACAGGATC
ATCTGCGGGACCACCGGTACATCCACTCCAAGGACAAGCCCTTCAAGTGC
AGCGATTGCGGCAAGGGTTTCTGCCAGTCGCGCACCCTGGCCGTGCACAA
GGTCACCCATCTGGAGGAGGGTCCGCACAAGTGTCCCATCTGCCAGCGGA
GCTTCAACCAGCGGGCCAACCTCAAGAGTCACCTCCAGAGCCACAGCGAG
CAGAGCACCAAGGAGGTGGTGGTGACCACCTCACCAGCCACTTCACATTC
GGTGCCAAACCAGGCATTGAGTTCGCCTCAACCTGAGAATTTGGCACAGC
ATCTGCCTGTCCTGGATCTATCCTCGTCATCCTCGAGCTCAGAGAAGCCC
AAGCGGATGCTGGGCTTCACCATCGATGAGATCATGAGCAGATAGCGAAG
CTTTCTAGACCAT
BS01495.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 1179 | CG3851-PA | 1..1179 | 17..1195 | 5895 | 100 | Plus |
| sob-RA | 1737 | CG3242-PA | 1174..1493 | 665..984 | 820 | 83.8 | Plus |
| bowl-RH | 2235 | CG10021-PH | 697..1015 | 659..977 | 695 | 81.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-RA | 2347 | CG3851-RA | 399..1577 | 17..1195 | 5895 | 100 | Plus |
| sob-RA | 2611 | CG3242-RA | 1764..2083 | 665..984 | 820 | 83.8 | Plus |
| bowl-RH | 3435 | CG10021-RH | 1060..1378 | 659..977 | 695 | 81.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:58:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3604994..3606101 | 1195..88 | 5540 | 100 | Minus |
| 2L | 23513712 | 2L | 3578861..3579006 | 810..665 | 535 | 91.1 | Minus |
| 2L | 23513712 | 2L | 3780422..3780581 | 659..818 | 485 | 86.9 | Plus |
| 2L | 23513712 | 2L | 3606286..3606358 | 89..17 | 365 | 100 | Minus |
| 2L | 23513712 | 2L | 3578541..3578704 | 984..821 | 310 | 79.3 | Minus |
| 2L | 23513712 | 2L | 3781903..3782064 | 816..977 | 225 | 75.9 | Plus |
Blast to na_te.dros performed 2014-11-28 07:58:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 1200..1277 | 410..495 | 114 | 65.1 | Plus |
BS01495.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:50:30 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smr-RC | 1345..1358 | 440..454 | 93 | -> | Plus |
| Smr-RC | 1588..1603 | 455..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:47:25 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 391..1569 | 17..1197 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:19 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 399..1577 | 17..1197 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:50:30 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smr-RC | 2703..2716 | 440..454 | 93 | -> | Plus |
| Smr-RC | 2946..2961 | 455..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:08:17 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| odd-RA | 399..1577 | 17..1197 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:08:17 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3604992..3606099 | 90..1197 | 99 | <- | Minus |
| 2L | 3606286..3606358 | 17..89 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:19 Download gff for
BS01495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3604992..3606099 | 90..1197 | 99 | <- | Minus |
| arm_2L | 3606286..3606358 | 17..89 | 100 | | Minus |
BS01495.pep Sequence
Translation from 16 to 1194
> BS01495.pep
MSSTSASPISNITVDDELNLSREQDFAEEDFIVIKEERETSLSPMLTPPH
TPTEEPLRRVHPAISEEAVATQLHMRHMAHYQQQQQQQQQQQQHRLWLQM
QQQQQQHQAPQQYPVYPTASADPVAVHQQLMNHWIRNAAIYQQQQQQQQH
PHHHHHHGHPHHPHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGA
GGASGVPSGATGSSRPKKQFICKYCNRQFTKSYNLLIHERTHTDERPYSC
DICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLE
EGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVTTSPATSHSVPNQA
LSSPQPENLAQHLPVLDLSSSSSSSEKPKRMLGFTIDEIMSR*
BS01495.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:43:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| odd-PA | 392 | CG3851-PA | 1..392 | 1..392 | 2131 | 100 | Plus |
| sob-PA | 578 | CG3242-PA | 344..503 | 175..328 | 607 | 68.8 | Plus |
| bowl-PH | 744 | CG10021-PH | 231..351 | 213..333 | 597 | 82.6 | Plus |
| bowl-PG | 744 | CG10021-PG | 231..351 | 213..333 | 597 | 82.6 | Plus |
| bowl-PF | 744 | CG10021-PF | 231..351 | 213..333 | 597 | 82.6 | Plus |
