Clone BS01501 Report

Search the DGRC for BS01501

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:15
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG7818-RA
Protein status:BS01501.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01501.3prime Sequence

819 bp (736 high quality bases) assembled on 2005-11-29

> BS01501.3prime
ATGGTCTAGAAAGCTTCGTTATCTGGGCCTTCCACGACCACGTGGAAAGC
CGCGTCCTCTTCCTCTTAAAACTTTGCTATTCGGCGGCGGACTCTTGGGC
CTCAGTAGTTCAATCCTACTAGTGCAACCGGTGGCTGGAGCCTCAGCAAA
GTAGGTCTGGTATAGCTCGGAGTTGAAGTTCGAGTTCGTCAGTTCCGGAC
CAACAGTTAGCCAACCTGGTCGAATACTCGAATCTCTGCCGAACAGATGC
AAACGCCGTCGACCCAAGCAGAAATGTTCGATGATGTGAAAGATCTCGAT
GGGCTTCTCGAAGCTGCCAAACTCCTCTTCCTCTGAGATGATTAAATCAA
TGTCCACGTTGGCATGGATAAAATCGCCATCAGTGGAGCGGCGAACAGTT
CCTTTGATTCCCATCAGGCAGTGTTCCTTGGTGCGTTGAAAGACCGCTTT
CGGTTCAAGTTGCTTGGAGTGCCCGGGCTTGTTAATGTTGGTCCGTATCC
AACATATGTCTTCGCACCTCCGGAATCCCCACTTCTTCAGGCAGTTGCGG
CCCATGTCCAAGCCCTCCGAGGATCCGCACCAAAGGAATACAAACGAACG
ATGAGCAGCTATCTCGCCCACATCCAAATTAAGTATATCATCCCAGTTCC
AGAAAACCCGCGGTGCCCCACCTACAGTGGCTACAGAAGGTGCTGCCCTG
GCATATTCCTCTAGCGGCGGCTCAATCAAAATAACATCAAACTTGGCGCC
CAGCGTCTTGACATCTAGCGATTTCAGATCCGCCTTTAAGTACATAGGTG
CGGATGCGGTGTCTTGGAT

BS01501.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-PA 1194 CG7818-RA 394..1194 819..19 4005 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-RA 1407 CG7818-RA 511..1312 819..18 4010 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8309255..8309866 629..18 3060 100 Minus
2L 23513712 2L 8309009..8309198 819..630 950 100 Minus
Blast to na_te.dros performed on 2015-02-11 11:33:55 has no hits.

BS01501.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:22 Download gff for BS01501.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-PA 394..1194 19..819 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:41 Download gff for BS01501.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-PA 394..1194 19..819 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 08:15:37 Download gff for BS01501.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 511..1322 7..819 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:52:46 Download gff for BS01501.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 511..1322 7..819 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:52:46 Download gff for BS01501.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8309009..8309198 630..819 100 -> Minus
2L 8309255..8309876 7..629 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 08:15:37 Download gff for BS01501.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8309009..8309198 630..819 100 -> Minus
arm_2L 8309255..8309876 7..629 99   Minus

BS01501.5prime Sequence

822 bp (788 high quality bases) assembled on 2005-11-29

> BS01501.5prime
GAAGTTATCAGTCGACATGAGCGATGTGCTAAAGAGCTCCCAGGAGCGAT
CCCGCAAGCGTCGTTTGCTTTTAGCGCAAACTTTGGGCTTGTCGAGCGTC
GACGATCTGAAAAAGGCTTTGGGTAATGCCGAAGACATTAACAGTAGTCG
CCAGCTGAATTCCGGTGGGCAACGCGAGGAGGAGGATGGTGGCGCCTCTT
CCTCCAAGAAAACCCCCAATGAAATCATCTATAGGGACTCCTCGACCTTC
CTGAAGGGAACCCAGTCTTCCAATCCGCACAATGACTACTGCCAGCACTT
TGTGGACACCGGTCAGCGTCCCCAGAACTTCATCCGTGATGTCGGCCTAG
CTGACCGCTTCGAGGAGTATCCCAAGTTGAGGGAACTGATCAAACTGAAG
GACAAACTCATCCAAGACACCGCATCCGCACCTATGTACTTAAAGGCGGA
TCTGAAATCGCTAGATGTCAAGACGCTGGGCGCCAAGTTTGATGTTATTT
TGATTGAGCCGCCGCTAGAGGAATATGCCAGGGCAGCACCTTCTGTAGCC
ACTGTAGGTGGGGCACCGCGGGTTTTCTGGAACTGGGATGATATACTTAA
TTTGGATGTGGGCGAGATAGCTGCTCATCGTTCGTTTGTATTCCTTTGGT
GCGGATCCTCGGAGGGCTTGGACATGGGCCGCAACTGCCTGAAGAAGTGG
GGATTCCGGAGGTGCGAAGACATATGTTGGATACGGACCAACATTAACAA
GCCCGGGCACTCCAAGCAACTTGAACCGAAAGCGGTCTTTTCACGCACCC
AGGAACACTGCCTGATGGGAAT

BS01501.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-PA 1194 CG7818-RA 1..806 17..822 3955 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-RA 1407 CG7818-RA 118..923 17..822 3985 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8308682..8309198 83..599 2585 100 Plus
2L 23513712 2L 8309255..8309477 600..822 1070 98.7 Plus
2L 23513712 2L 8308544..8308609 17..82 330 100 Plus
Blast to na_te.dros performed on 2015-02-13 02:41:20 has no hits.

BS01501.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:23 Download gff for BS01501.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-PA 1..806 17..822 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:42 Download gff for BS01501.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-PA 1..806 17..822 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:51:42 Download gff for BS01501.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 118..923 17..822 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:59:39 Download gff for BS01501.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 118..923 17..822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 06:59:39 Download gff for BS01501.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8308544..8308609 17..82 100 -> Plus
2L 8308682..8309198 83..599 100 -> Plus
2L 8309255..8309477 600..822 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:51:42 Download gff for BS01501.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8308544..8308609 17..82 100 -> Plus
arm_2L 8308682..8309198 83..599 100 -> Plus
arm_2L 8309255..8309477 600..822 98   Plus

BS01501.complete Sequence

1228 bp (1228 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634626

> BS01501.complete
GAAGTTATCAGTCGACATGAGCGATGTGCTAAAGAGCTCCCAGGAGCGAT
CCCGCAAGCGTCGTTTGCTTTTAGCGCAAACTTTGGGCTTGTCGAGCGTC
GACGATCTGAAAAAGGCTTTGGGTAATGCCGAAGACATTAACAGTAGTCG
CCAGCTGAATTCCGGTGGGCAACGCGAGGAGGAGGATGGTGGCGCCTCTT
CCTCCAAGAAAACCCCCAATGAAATCATCTATAGGGACTCCTCGACCTTC
CTGAAGGGAACCCAGTCTTCCAATCCGCACAATGACTACTGCCAGCACTT
TGTGGACACCGGTCAGCGTCCCCAGAACTTCATCCGTGATGTCGGCCTAG
CTGACCGCTTCGAGGAGTATCCCAAGTTGAGGGAACTGATCAAACTGAAG
GACAAACTCATCCAAGACACCGCATCCGCACCTATGTACTTAAAGGCGGA
TCTGAAATCGCTAGATGTCAAGACGCTGGGCGCCAAGTTTGATGTTATTT
TGATTGAGCCGCCGCTAGAGGAATATGCCAGGGCAGCACCTTCTGTAGCC
ACTGTAGGTGGGGCACCGCGGGTTTTCTGGAACTGGGATGATATACTTAA
TTTGGATGTGGGCGAGATAGCTGCTCATCGTTCGTTTGTATTCCTTTGGT
GCGGATCCTCGGAGGGCTTGGACATGGGCCGCAACTGCCTGAAGAAGTGG
GGATTCCGGAGGTGCGAAGACATATGTTGGATACGGACCAACATTAACAA
GCCCGGGCACTCCAAGCAACTTGAACCGAAAGCGGTCTTTCAACGCACCA
AGGAACACTGCCTGATGGGAATCAAAGGAACTGTTCGCCGCTCCACTGAT
GGCGATTTTATCCATGCCAACGTGGACATTGATTTAATCATCTCAGAGGA
AGAGGAGTTTGGCAGCTTCGAGAAGCCCATCGAGATCTTTCACATCATCG
AACATTTCTGCTTGGGTCGACGGCGTTTGCATCTGTTCGGCAGAGATTCG
AGTATTCGACCAGGTTGGCTAACTGTTGGTCCGGAACTGACGAACTCGAA
CTTCAACTCCGAGCTATACCAGACCTACTTTGCTGAGGCTCCAGCCACCG
GTTGCACTAGTAGGATTGAACTACTGAGGCCCAAGAGTCCGCCGCCGAAT
AGCAAAGTTTTAAGAGGAAGAGGACGCGGCTTTCCACGTGGTCGTGGAAG
GCCCAGATAACGAAGCTTTCTAGACCAT

BS01501.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-RA 1194 CG7818-PA 1..1194 17..1210 5970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-RA 1407 CG7818-RA 118..1312 17..1211 5975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8309255..8309866 600..1211 3060 100 Plus
2L 23513712 2L 8308682..8309198 83..599 2585 100 Plus
2L 23513712 2L 8308544..8308609 17..82 330 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:54:24 has no hits.

BS01501.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:54 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 1..1194 17..1210 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:47 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 105..1309 17..1222 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:00:30 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 118..1312 17..1212 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:54 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 105..1309 17..1222 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:10:30 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
CG7818-RA 118..1312 17..1212 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:10:30 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8308544..8308609 17..82 100 -> Plus
2L 8308682..8309198 83..599 100 -> Plus
2L 8309255..8309866 600..1212 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:00:30 Download gff for BS01501.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8308544..8308609 17..82 100 -> Plus
arm_2L 8308682..8309198 83..599 100 -> Plus
arm_2L 8309255..8309866 600..1212 99   Plus

BS01501.pep Sequence

Translation from 16 to 1209

> BS01501.pep
MSDVLKSSQERSRKRRLLLAQTLGLSSVDDLKKALGNAEDINSSRQLNSG
GQREEEDGGASSSKKTPNEIIYRDSSTFLKGTQSSNPHNDYCQHFVDTGQ
RPQNFIRDVGLADRFEEYPKLRELIKLKDKLIQDTASAPMYLKADLKSLD
VKTLGAKFDVILIEPPLEEYARAAPSVATVGGAPRVFWNWDDILNLDVGE
IAAHRSFVFLWCGSSEGLDMGRNCLKKWGFRRCEDICWIRTNINKPGHSK
QLEPKAVFQRTKEHCLMGIKGTVRRSTDGDFIHANVDIDLIISEEEEFGS
FEKPIEIFHIIEHFCLGRRRLHLFGRDSSIRPGWLTVGPELTNSNFNSEL
YQTYFAEAPATGCTSRIELLRPKSPPPNSKVLRGRGRGFPRGRGRPR*

BS01501.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG7818-PA 397 CG7818-PA 1..397 1..397 2097 100 Plus
Ime4-PA 608 CG5933-PA 385..594 135..365 253 29.3 Plus