Clone BS01514 Report

Search the DGRC for BS01514

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:15
Well:14
Vector:pDNR-Dual
Associated Gene/Transcriptachi-RA
Protein status:BS01514.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01514.3prime Sequence

848 bp (807 high quality bases) assembled on 2005-11-29

> BS01514.3prime
ATGGTCTAGAAAGCTTCGCTAGTCTCCCATGTAAACGAAATCGTCATCCT
GGACGTCATCGTTTTGGCGCACAGCCATGGCAGTTTCCACTAGATAATAG
AGACACTTGTACTTGGCACGCTCATCTGGACTTGTGCCCTGCGACATAGC
AGATAATTGACTCTGGCCAGCTTCTGCTTCGGCACCGGTAAACACCTCGT
CCGCCTGTAGATTGTCACCAATGTCCTGTTGATTGGAGTTGGTAGGATCG
ATTGTCTGGATTTCTGAGGCCTGTATTCTATTCAGCTCGCTTTCAAAGTC
AGTCAACTGTTGATTCACGTCACGCTTCGCAGTCTGATTGCGATTCCAGA
TGGCGGTATTCTGAACAGATCCCTTAGAACCAGAGGTACCTGGATTATTG
CCAGCCGAAGTGCTGACTTCCTCAGTACCAAATACAGTTTTTATAACGCT
CTGCCAATCATGGGAGGTCTCGAAGCGTACTTCCTCCTCGCTGTTCGGCC
CACAGGACTCGTATCCCTGTGCACTCTCTTCGCCTTCGGACCTGTAGATG
ACACTGTCCTCGTACTCCGGCTCCATCTTGACCATTTGTCCGTTGGGGCC
CTGCACATACTGTTCAAAGTTGGTCAGCACATTGGCGATGCCCTCGTGAA
TCTCACCGGCGCCATCCACCTCCTCTGTAGCGCCAACGACCACTTCGGAA
GCAGGACTTCCGTGTGCGGGATTCGGCCCAGTCAAGTTTGCGCCCAACGC
ACTTGATCTCGAACAGTTGGGGCTAACCTTTTTGCCACGTCGCGATATGG
TGAAGTGCAGAGGATCGTTGCCCTCGCGCCTGATCATCTCCGGTAGAA

BS01514.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG8819-PA 1281 achi-RA 452..1281 848..19 4150 100 Minus
CG8821-PA 1275 vis-RA 446..1173 848..121 3415 98.7 Minus
CG8819-PC 1668 achi-RC 1144..1668 543..19 2625 100 Minus
CG8821-PB 1575 vis-RB 1051..1473 543..121 1915 98.1 Minus
CG8819-PC 1668 achi-RC 452..758 848..542 1535 100 Minus
CG8821-PB 1575 vis-RB 516..665 691..542 750 100 Minus
CG8821-PA 1275 vis-RA 1179..1275 115..19 485 100 Minus
CG8821-PB 1575 vis-RB 1479..1575 115..19 485 100 Minus
CG8821-PB 1575 vis-RB 446..518 848..776 340 98.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
achi-RA 2122 CG8819-RA 756..1585 848..19 4150 100 Minus
vis-RA 1741 CG8821-RA 539..1368 848..19 3955 98.4 Minus
achi-RD 2277 CG8819-RD 1216..1740 543..19 2625 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12512254..12512435 137..318 910 100 Plus
2R 25286936 2R 12508465..12508646 137..318 850 97.8 Plus
2R 25286936 2R 12513566..12513725 689..848 800 100 Plus
2R 25286936 2R 12509777..12509936 689..848 785 99.4 Plus
2R 25286936 2R 12509569..12509720 540..691 760 100 Plus
2R 25286936 2R 12513358..12513509 540..691 760 100 Plus
2R 25286936 2R 12512501..12512622 318..439 610 100 Plus
2R 25286936 2R 12512071..12512190 19..138 600 100 Plus
2R 25286936 2R 12508712..12508833 318..439 580 98.4 Plus
2R 25286936 2R 12508893..12508997 440..544 525 100 Plus
2R 25286936 2R 12512682..12512786 440..544 525 100 Plus
2R 25286936 2R 12508269..12508388 19..138 510 95 Plus
Blast to na_te.dros performed on 2015-02-01 09:12:29 has no hits.

BS01514.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:34 Download gff for BS01514.3prime
Subject Subject Range Query Range Percent Splice Strand
achi-PA 454..1281 19..846 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:57 Download gff for BS01514.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8819-PA 454..1281 19..846 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:15:44 Download gff for BS01514.3prime
Subject Subject Range Query Range Percent Splice Strand
achi-RA 756..1588 13..848 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:55:02 Download gff for BS01514.3prime
Subject Subject Range Query Range Percent Splice Strand
achi-RA 756..1588 13..848 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:55:02 Download gff for BS01514.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12512682..12512783 440..541 100 <- Plus
2R 12513360..12513508 542..690 100 <- Plus
2R 12513568..12513725 691..848 100   Plus
2R 12512068..12512189 13..137 97 <- Plus
2R 12512255..12512434 138..317 100 <- Plus
2R 12512501..12512622 318..439 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:15:44 Download gff for BS01514.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8400187..8400288 440..541 100 <- Plus
arm_2R 8400865..8401013 542..690 100 <- Plus
arm_2R 8401073..8401230 691..848 100   Plus
arm_2R 8399573..8399694 13..137 97 <- Plus
arm_2R 8399760..8399939 138..317 100 <- Plus
arm_2R 8400006..8400127 318..439 100 <- Plus

BS01514.5prime Sequence

852 bp (785 high quality bases) assembled on 2005-11-29

> BS01514.5prime
GAAGTTATCAGTCGACATGATCTCGCCGGAACAAGAAGAGGTCAACATGG
TCCTGGATCGCCATGTACGGCAGAATATCCAGGACATGATGCACGAGGCT
CATGTCCAGGCGAGCCTGCTGGAGAACGAAGGACGCGGCCGTTTCCACTC
GGACTCAAGTTTGGACCAGGATTCTCTTCACGCTGACGTCATCGTGGAGG
AGGATCAGAGCACCGAACACGGCGCCAACCAGGTGCAAAACTACCACGAC
ATGATGGTGGACAGTGAACACCACATCGACATAAATGGGTCGCTGCGCAA
ACGTCGTGGAAATCTTCCCAAGACCTCTGTAAAGATTTTAAAGCGTTGGC
TTTATGAGCACCGCTATAACGCCTATCCGAGCGATGCGGAGAAGTTCACC
CTGTCCCAGGAGGCCAATCTGACGGTGCTCCAAGTGTGCAACTGGTTCAT
CAATGCCCGTCGCCGCATTCTACCGGAGATGATCAGGCGCGAGGGCAACG
ATCCTCTGCACTTCACCATATCGCGACGTGGCAAAAAGGTTAGCCCCAAC
TGTTCGAGATCAAGTGCGTTGGGCGCAAACTTGACTGGGCCGAATCCCGC
ACACGGAAGTCCTGCTTCCGAAGTGGTCGTTGGCGCTACAGAGGAGGTGG
ATGGCGCCGGTGAGATTCACGAGGGCATCGCCAATGTGCTGACCAACTTT
GAACAGTATGTGCAGGGCCCCAACGGACAAATGGTCAAGATGGAGCCGGA
GTACGAGGACAGTGTCATCTACAGGTCCGAAGGCGAAGAGAGTGCACAGG
GATACGAGTCCTGTGGGCCGAACAGCGAGGAGGAAGTACGCTTCGAGACT
TC

BS01514.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG8819-PA 1281 achi-RA 1..833 17..849 4165 100 Plus
CG8819-PC 1668 achi-RC 1..758 17..774 3790 100 Plus
CG8821-PA 1275 vis-RA 186..827 208..849 3010 98.7 Plus
CG8821-PB 1575 vis-RB 186..518 208..540 1465 97.5 Plus
CG8821-PB 1575 vis-RB 516..665 625..774 750 100 Plus
CG8821-PA 1275 vis-RA 1..167 17..183 510 92.2 Plus
CG8821-PB 1575 vis-RB 1..167 17..183 510 92.2 Plus
CG8819-PC 1668 achi-RC 1144..1220 773..849 385 100 Plus
CG8821-PB 1575 vis-RB 1051..1127 773..849 385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
achi-RA 2122 CG8819-RA 305..1137 17..849 4165 100 Plus
achi-RD 2277 CG8819-RD 73..830 17..774 3790 100 Plus
achi-RC 2509 CG8819-RC 305..1062 17..774 3790 100 Plus
achi-RD 2277 CG8819-RD 1216..1292 773..849 385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:15:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12513566..12514063 627..130 2490 100 Minus
2R 25286936 2R 12509777..12510268 627..130 2095 95.2 Minus
2R 25286936 2R 12509569..12509720 776..625 760 100 Minus
2R 25286936 2R 12513358..12513509 776..625 760 100 Minus
2R 25286936 2R 12514129..12514244 132..17 580 100 Minus
2R 25286936 2R 12510327..12510439 129..17 445 92.9 Minus
2R 25286936 2R 12508920..12508997 849..772 390 100 Minus
2R 25286936 2R 12512709..12512786 849..772 390 100 Minus
Blast to na_te.dros performed on 2015-02-10 03:15:43 has no hits.

BS01514.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:35 Download gff for BS01514.5prime
Subject Subject Range Query Range Percent Splice Strand
achi-PA 1..836 17..852 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:18:59 Download gff for BS01514.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8819-PA 1..836 17..852 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:45:43 Download gff for BS01514.5prime
Subject Subject Range Query Range Percent Splice Strand
achi-RA 305..1140 17..852 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:14:49 Download gff for BS01514.5prime
Subject Subject Range Query Range Percent Splice Strand
achi-RA 305..1140 17..852 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:14:49 Download gff for BS01514.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12513360..12513508 626..774 100 <- Minus
2R 12512706..12512783 775..852 98 <- Minus
2R 12513568..12514061 132..625 100 <- Minus
2R 12514130..12514244 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:45:43 Download gff for BS01514.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8400211..8400288 775..852 98 <- Minus
arm_2R 8400865..8401013 626..774 100 <- Minus
arm_2R 8401073..8401566 132..625 100 <- Minus
arm_2R 8401635..8401749 17..131 100   Minus

BS01514.complete Sequence

1315 bp (1315 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634629

> BS01514.complete
GAAGTTATCAGTCGACATGATCTCGCCGGAACAAGAAGAGGTCAACATGG
TCCTGGATCGCCATGTACGGCAGAATATCCAGGACATGATGCACGAGGCT
CATGTCCAGGCGAGCCTGCTGGAGAACGAAGGACGCGGCCGTTTCCACTC
GGACTCAAGTTTGGACCAGGATTCTCTTCACGCTGACGTCATCGTGGAGG
AGGATCAGAGCACCGAACACGGCGCCAACCAGGTGCAAAACTACCACGAC
ATGATGGTGGACAGTGAACACCACATCGACATAAATGGGTCGCTGCGCAA
ACGTCGTGGAAATCTTCCCAAGACCTCTGTAAAGATTTTAAAGCGTTGGC
TTTATGAGCACCGCTATAACGCCTATCCGAGCGATGCGGAGAAGTTCACC
CTGTCCCAGGAGGCCAATCTGACGGTGCTCCAAGTGTGCAACTGGTTCAT
CAATGCCCGTCGCCGCATTCTACCGGAGATGATCAGGCGCGAGGGCAACG
ATCCTCTGCACTTCACCATATCGCGACGTGGCAAAAAGGTTAGCCCCAAC
TGTTCGAGATCAAGTGCGTTGGGCGCAAACTTGACTGGGCCGAATCCCGC
ACACGGAAGTCCTGCTTCCGAAGTGGTCGTTGGCGCTACAGAGGAGGTGG
ATGGCGCCGGTGAGATTCACGAGGGCATCGCCAATGTGCTGACCAACTTT
GAACAGTATGTGCAGGGCCCCAACGGACAAATGGTCAAGATGGAGCCGGA
GTACGAGGACAGTGTCATCTACAGGTCCGAAGGCGAAGAGAGTGCACAGG
GATACGAGTCCTGTGGGCCGAACAGCGAGGAGGAAGTACGCTTCGAGACC
TCCCATGATTGGCAGAGCGTTATAAAAACTGTATTTGGTACTGAGGAAGT
CAGCACTTCGGCTGGCAATAATCCAGGTACCTCTGGTTCTAAGGGATCTG
TTCAGAATACCGCCATCTGGAATCGCAATCAGACTGCGAAGCGTGACGTG
AATCAACAGTTGACTGACTTTGAAAGCGAGCTGAATAGAATACAGGCCTC
AGAAATCCAGACAATCGATCCTACCAACTCCAATCAACAGGACATTGGTG
ACAATCTACAGGCGGACGAGGTGTTTACCGGTGCCGAAGCAGAAGCTGGC
CAGAGTCAATTATCTGCTATGTCGCAGGGCACAAGTCCAGATGAGCGTGC
CAAGTACAAGTGTCTCTATTATCTAGTGGAAACTGCCATGGCTGTGCGCC
AAAACGATGACGTCCAGGATGACGATTTCGTTTACATGGGAGACTAGCGA
AGCTTTCTAGACCAT

BS01514.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
achi-RA 1281 CG8819-PA 1..1281 17..1297 6405 100 Plus
vis-RA 1275 CG8821-PA 1..1275 17..1297 5695 96.5 Plus
achi-RD 1668 CG8819-PD 1..758 17..774 3790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
achi-RA 2122 CG8819-RA 305..1585 17..1297 6405 100 Plus
vis-RA 1741 CG8821-RA 94..1368 17..1297 5695 96.5 Plus
achi-RD 2277 CG8819-RD 73..830 17..774 3790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12513566..12514063 627..130 2490 100 Minus
2R 25286936 2R 12509777..12510268 627..130 2095 95.2 Minus
2R 25286936 2R 12512254..12512435 1179..998 910 100 Minus
2R 25286936 2R 12508465..12508646 1179..998 850 97.8 Minus
2R 25286936 2R 12509569..12509720 776..625 760 100 Minus
2R 25286936 2R 12513358..12513509 776..625 760 100 Minus
2R 25286936 2R 12512501..12512622 998..877 610 100 Minus
2R 25286936 2R 12512071..12512190 1297..1178 600 100 Minus
2R 25286936 2R 12508712..12508833 998..877 580 98.4 Minus
2R 25286936 2R 12514129..12514244 132..17 580 100 Minus
2R 25286936 2R 12508893..12508997 876..772 525 100 Minus
2R 25286936 2R 12512682..12512786 876..772 525 100 Minus
2R 25286936 2R 12508269..12508388 1297..1178 510 95 Minus
2R 25286936 2R 12510327..12510439 129..17 445 92.9 Minus
Blast to na_te.dros performed on 2014-11-28 00:57:19 has no hits.

BS01514.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:58 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
achi-RA 1..1281 17..1297 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:50 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
achi-RA 294..1577 17..1303 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:35:04 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
achi-RA 305..1587 17..1299 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:58 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
achi-RA 294..1577 17..1303 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:41:08 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
achi-RA 305..1587 17..1299 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:41:08 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12512069..12512189 1179..1299 99 <- Minus
2R 12512255..12512434 999..1178 100 <- Minus
2R 12512501..12512622 877..998 100 <- Minus
2R 12512682..12512783 775..876 100 <- Minus
2R 12513360..12513508 626..774 100 <- Minus
2R 12513568..12514061 132..625 100 <- Minus
2R 12514130..12514244 17..131 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:35:04 Download gff for BS01514.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8399574..8399694 1179..1299 99 <- Minus
arm_2R 8399760..8399939 999..1178 100 <- Minus
arm_2R 8400006..8400127 877..998 100 <- Minus
arm_2R 8400187..8400288 775..876 100 <- Minus
arm_2R 8400865..8401013 626..774 100 <- Minus
arm_2R 8401073..8401566 132..625 100 <- Minus
arm_2R 8401635..8401749 17..131 100   Minus

BS01514.pep Sequence

Translation from 16 to 1296

> BS01514.pep
MISPEQEEVNMVLDRHVRQNIQDMMHEAHVQASLLENEGRGRFHSDSSLD
QDSLHADVIVEEDQSTEHGANQVQNYHDMMVDSEHHIDINGSLRKRRGNL
PKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRR
ILPEMIRREGNDPLHFTISRRGKKVSPNCSRSSALGANLTGPNPAHGSPA
SEVVVGATEEVDGAGEIHEGIANVLTNFEQYVQGPNGQMVKMEPEYEDSV
IYRSEGEESAQGYESCGPNSEEEVRFETSHDWQSVIKTVFGTEEVSTSAG
NNPGTSGSKGSVQNTAIWNRNQTAKRDVNQQLTDFESELNRIQASEIQTI
DPTNSNQQDIGDNLQADEVFTGAEAEAGQSQLSAMSQGTSPDERAKYKCL
YYLVETAMAVRQNDDVQDDDFVYMGD*

BS01514.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
achi-PA 426 CG8819-PA 1..426 1..426 2224 100 Plus
vis-PA 424 CG8821-PA 1..424 1..426 2110 95.3 Plus
achi-PD 555 CG8819-PD 1..309 1..316 1324 83.2 Plus
achi-PC 555 CG8819-PC 1..309 1..316 1324 83.2 Plus
vis-PB 524 CG8821-PB 1..278 1..316 1052 69.6 Plus
achi-PD 555 CG8819-PD 370..555 246..426 902 95.7 Plus
achi-PC 555 CG8819-PC 370..555 246..426 902 95.7 Plus