Clone BS01521 Report

Search the DGRC for BS01521

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:15
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG10959-RA
Protein status:BS01521.pep: full length peptide match
Sequenced Size:1366

Clone Sequence Records

BS01521.3prime Sequence

935 bp (736 high quality bases) assembled on 2005-11-29

> BS01521.3prime
ATGGTCTAGAAAGCTTCGTCAATAGGTGAAAAGCATCTCGATGGGTTCCG
CCTCGGCACCCTCCGTCGCATTTACGGACGCCTGGAGCTTGTGCGCTCGC
ATATGAGCGGATAGACCTGCCGCCTGGGCATAGGCATTACCGCAGATCTT
GCACTTGAACTTCTTGATGCCCAAATGCAGATGCTTGTGGTGATAGAGCG
CCTTCGGGCGGGAGAAGGCCGAATCACATTTGTCGCACTTGTAGGGCTTC
TCGGTGGAATGCATGGCCTGGTGCTCGTTGAGCAGCGACTTGGAGGCAAA
GCGGCGGGCACAGGTCTGGCACTGGAAGGGTTTCTCGCCCGTATGCGTGC
GCCGGTGGACGATCAACGCCTCCCGGTAGCGGGATCTATAGCCGCACAGC
TCGCACACGTAGTTCCGCTCCTCGCTGTGGACCCGCCGATGCGAGGTGAG
GTTGTGCTGGTTGACAAACGACTTGCCGCAGTTCTCGTGCTCACACTTGA
ATGTCCTGGCGCCGGAGTGACCCTGCACATGGCGAAGAAGGGATCGCGAG
CTTTTGAACACCTTGTCGCATAGCTGGCAGGCGAACTCCGTGTGCTCCTT
GCGACGATGCTGGGCCAATGCTCGGTCCACATCGAAGGTGGCTTTGCAGT
CGACGCACTTGAAGGCCTGCGGAAACGGATGGCTCATCTTTAGGTGGGTG
TTTAGGTATTTCTGCGTCGTGTACCTCCTGTCGCAGTGTGGGCAGTTGTA
GTCCTTTGGTTGGCGCTGCTTCTTAAAAACAGACTGGTGCTCCTCCCCGT
CCTCATCCGGTTGATAGTCTTTGCGATTTTCCACGCCCAACAGAGCCTCC
AGAGCGCACCCCCTCGTGACGGATGCGGAGGGACTGTCATGATCCGGCTG
CCACATCGTATCGATGGTCTCCTCGTCCACGGACT

BS01521.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-PA 1332 CG10959-RA 530..1328 821..23 3995 100 Minus
CG10959-PA 1332 CG10959-RA 416..484 935..867 320 98.5 Minus
CG10959-PA 1332 CG10959-RA 489..526 862..825 190 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 15:33:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1836 CG10959-RA 531..1448 935..18 4470 99.3 Minus
CG10959-RB 1830 CG10959-RB 531..1442 935..18 4370 98.7 Minus
CG2129-RA 2017 CG2129-RA 1357..1462 218..113 200 80.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 15:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8149543..8150298 773..18 3765 99.9 Minus
X 23542271 X 8149313..8149476 935..772 700 95.1 Minus
X 23542271 X 8147195..8147300 218..113 200 79.2 Minus
Blast to na_te.dros performed on 2015-01-31 15:33:10 has no hits.

BS01521.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:47 Download gff for BS01521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 416..1332 19..935 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:19:13 Download gff for BS01521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 416..1332 19..935 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:27:57 Download gff for BS01521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 531..1454 12..935 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:43:19 Download gff for BS01521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 531..1454 12..935 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:43:19 Download gff for BS01521.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8149313..8149476 772..935 96 -> Minus
X 8149545..8150304 12..771 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:27:57 Download gff for BS01521.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8043346..8043509 772..935 96 -> Minus
arm_X 8043578..8044337 12..771 99   Minus

BS01521.5prime Sequence

865 bp (808 high quality bases) assembled on 2005-11-29

> BS01521.5prime
GAAGTTATCAGTCGACATGTTGAGACACTGCCTCGCCAACGTCGACTACG
TCCGCCTGCACGCCCAGCAGCAGTTGCGTCCCAAATGCGGCGAGATCTTC
TACGAACCGGAGGCGAATAGATTCCAACTGGTCTGCCTGCTCTGCGACAT
GAAGCACTTTGGATTCGAGGACTTCGCCCGCCATATCCGTAATGTGCACT
TCGACAAGCAGGGCCGACCGCTCACCAAGACGGTCACGGGACTGGGCAGA
CTAGCACGAGAGGAACAGGAGTTCCAAGGGGTCAGCGCAGAACCATTGGC
TGTGGACAGCTTCAAGAAAGAGTACCTGCCCAACGAGGATGTTCTGTCGG
AGGAGGAGGACGCGGAACAGGAGCTGGGACTGGAACAGGACGAGGGCAAT
CCACTACGCATCATGGTGCTCGGGGGTAAACAGTCCGTGGACGAGGAGAC
CATCGATACGATGTGGCAGCCGGATCATGACAGTTCCTCCGCATCCGTCA
ACGAGGGGTGCGCTCTGGAGGCTCTGTTGGGCGTGGAAAATCCGCAAGAC
TATCAACCGGATGAGGACGGGGAGGAGCACCAGTCTGTTTTTAAGAAGCA
GCGCCAACCAAAGGACTACAACTGCCCACACTGCGACAGGAGGTACACGA
CGCAGAAATACCTAAACACCCACCTAAAGATGAGCCATCCGTTTCCGCAG
GCCTTCAAGTGCGTCGACTGCAAAGCCACCTTCGATGTGGACCGAGCATT
GGCCCAGCATCGTCGCAAGGAGCACACGGAGTTCGCCTGCCAGCTATGCG
ACAAGGTGTTTCAAAGCTCGCGATCCCTTCTTTCGCATGTGCAGGGTCAC
TCCGGGCGCAGGACA

BS01521.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-PA 1332 CG10959-RA 1..816 17..832 4030 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 03:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1836 CG10959-RA 116..964 17..865 4125 99.3 Plus
CG10959-RB 1830 CG10959-RB 116..958 17..865 4025 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 03:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8148898..8149476 17..595 2895 100 Plus
X 23542271 X 8149543..8149814 594..865 1240 97.1 Plus
Blast to na_te.dros performed on 2015-02-10 03:17:06 has no hits.

BS01521.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:09:48 Download gff for BS01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 1..848 17..864 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:19:14 Download gff for BS01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-PA 1..848 17..864 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:45:52 Download gff for BS01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 108..963 7..864 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 05:15:00 Download gff for BS01521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 108..963 7..864 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 05:15:00 Download gff for BS01521.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8148890..8149476 7..595 99 -> Plus
X 8149545..8149813 596..864 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:45:52 Download gff for BS01521.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8042923..8043509 7..595 99 -> Plus
arm_X 8043578..8043846 596..864 97   Plus

BS01521.complete Sequence

1366 bp assembled on 2009-02-12

> BS01521.complete
GAAGTTATCAGTCGACATGTTGAGACACTGCCTCGCCAACGTCGACTACG
TCCGCCTGCACGCCCAGCAGCAGTTGCGTCCCAAATGCGGCGAGATCTTC
TACGAACCGGAGGCGAATAGATTCCAACTGGTCTGCCTGCTCTGCGACAT
GAAGCACTTTGGATTCGAGGACTTCGCCCGCCATATCCGTAATGTGCACT
TCGACAAGCAGGGCCGACCGCTCACCAAGACGGTCACGGGACTGGGCAGA
CTAGCACGAGAGGAACAGGAGTTCCAAGGGGTCAGCGCAGAACCATTGGC
TGTGGACAGCTTCAAGAAAGAGTACCTGCCCAACGAGGATGTTCTGTCGG
AGGAGGAGGACGCGGAACAGGAGCTGGGACTGGAACAGGACGAGGGCAAT
CCACTACGCATCATGGTGCTCGGGGGTAAACAGTCCGTGGACGAGGAGAC
CATCGATACGATGTGGCAGCCGGATCATGACAGTTCCTCCGCATCCGTCA
ACGAGGGGTGCGCTCTGGAGGCTCTGTTGGGCGTGGAAAATCCGCAAGAC
TATCAACCGGATGAGGACGGGGAGGAGCACCAGTCTGTTTTTAAGAAGCA
GCGCCAACCAAAGGACTACAACTGCCCACACTGCGACAGGAGGTACACGA
CGCAGAAATACCTAAACACCCACCTAAAGATGAGCCATCCGTTTCCGCAG
GCCTTCAAGTGCGTCGACTGCAAAGCCACCTTCGATGTGGACCGAGCATT
GGCCCAGCATCGTCGCAAGGAGCACACGGAGTTCGCCTGCCAGCTATGCG
ACAAGGTGTTCAAAAGCTCGCGATCCCTTCTTCGCCATGTGCAGGGTCAC
TCCGGCGCCAGGACATTCAAGTGTGAGCACGAGAACTGCGGCAAGTCGTT
TGTCAACCAGCACAACCTCACCTCGCATCGGCGGGTCCACAGCGAGGAGC
GGAACTACGTGTGCGAGCTGTGCGGCTATAGATCCCGCTACCGGGAGGCG
TTGATCGTCCACCGGCGCACGCATACGGGCGAGAAACCCTTCCAGTGCCA
GACCTGTGCCCGCCGCTTTGCCTCCAAGTCGCTGCTCAACGAGCACCAGG
CCATGCATTCCACCGAGAAGCCCTACAAGTGCGACAAATGTGATTCGGCC
TTCTCCCGCCCGAAGGCGCTCTATCACCACAAGCATCTGCATTTGGGCAT
CAAGAAGTTCAAGTGCAAGATCTGCGGTAATGCCTATGCCCAGGCGGCAG
GTCTATCCGCTCATATGCGAGCGCACAAGCTCCAGGCGTCCGTAAATGCG
ACGGAGGGTGCCGAGGCGGAACCCATCGAGATGCTTTTCACCTATTGACG
AAGCTTTCTAGACCAT

BS01521.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1332 CG10959-PA 1..1332 17..1348 6645 99.9 Plus
CG10959-RB 1326 CG10959-PB 1..1326 17..1348 6520 99.5 Plus
CG2129-RA 1398 CG2129-PA 1247..1352 1149..1254 200 79.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-RA 1836 CG10959-RA 116..1448 17..1349 6650 99.9 Plus
CG10959-RB 1830 CG10959-RB 116..1442 17..1349 6525 99.5 Plus
CG2129-RA 2017 CG2129-RA 1357..1462 1149..1254 200 79.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8149543..8150298 594..1349 3765 99.9 Plus
X 23542271 X 8148898..8149476 17..595 2895 100 Plus
X 23542271 X 8147195..8147300 1149..1254 200 79.2 Plus
Blast to na_te.dros performed on 2014-11-27 15:19:47 has no hits.

BS01521.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:26 Download gff for BS01521.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 34..1361 22..1350 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:49:50 Download gff for BS01521.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 121..1448 22..1350 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:05:12 Download gff for BS01521.complete
Subject Subject Range Query Range Percent Splice Strand
CG10959-RA 121..1448 22..1350 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:05:12 Download gff for BS01521.complete
Subject Subject Range Query Range Percent Splice Strand
X 8148903..8149476 22..595 100 -> Plus
X 8149545..8150298 596..1350 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:49:50 Download gff for BS01521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8042936..8043509 22..595 100 -> Plus
arm_X 8043578..8044331 596..1350 99   Plus

BS01521.pep Sequence

Translation from 16 to 1347

> BS01521.pep
MLRHCLANVDYVRLHAQQQLRPKCGEIFYEPEANRFQLVCLLCDMKHFGF
EDFARHIRNVHFDKQGRPLTKTVTGLGRLAREEQEFQGVSAEPLAVDSFK
KEYLPNEDVLSEEEDAEQELGLEQDEGNPLRIMVLGGKQSVDEETIDTMW
QPDHDSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFKKQRQPKD
YNCPHCDRRYTTQKYLNTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRR
KEHTEFACQLCDKVFKSSRSLLRHVQGHSGARTFKCEHENCGKSFVNQHN
LTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQCQTCARR
FASKSLLNEHQAMHSTEKPYKCDKCDSAFSRPKALYHHKHLHLGIKKFKC
KICGNAYAQAAGLSAHMRAHKLQASVNATEGAEAEPIEMLFTY*

BS01521.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG10959-PA 443 CG10959-PA 1..443 1..443 2408 100 Plus
CG10959-PB 441 CG10959-PB 1..441 1..443 2385 99.5 Plus
CG2129-PA 465 CG2129-PA 17..459 23..421 668 34.2 Plus
CG18262-PA 469 CG18262-PA 18..411 23..420 518 31.2 Plus
Meics-PB 571 CG8474-PB 170..478 89..420 406 31.5 Plus
CG2129-PA 465 CG2129-PA 296..462 203..368 212 30.4 Plus