Clone Sequence Records
BS01532.3prime Sequence
825 bp (755 high quality bases) assembled on 2005-11-29
> BS01532.3prime
ATGGTCTAGAAAGCTTCGCTAAACTGGCGTGCAGTCGTCTCTCTGAACGT
GGGCATCATAGTTCTGCTCGTTGATGAAAGTATGCGTGCACTTGGAGCAG
TGGAAGCGGCGATGGCGGTTGGTTCCGGGACTCTCGTGCTCCCGCAGATG
GGCCTTCATGTTGTACATCTGGGAGAAGCGCTTGTTGCACACCGGGCAGG
CGAAGGGCTTGTCCCCCGTGTGGGATCGCATGTGCCGCTCCAAGTGAGCC
TTGGTCCGGGTCTTGAAGCCGCACACCTGGCACTCCAGCCGTTTGGTCTC
GCTGTCGTGGATCATCTTGTGCTTGTACAGGGCCACCTTGTGAACGAATC
GCTTGGAGCAGACATCGCACTGGTATGGCGTTTCGCCGGAGTGCCAGGCC
ATGTGGTGCTTCAGCCGGAACTTGCGGCTAAAGCGTTCCGGGCACACTGG
GCAGGCGAACTGCTTCACGGGCTCGTGGTTCTGCAGGTGCCCTATGAACC
CGGAGTACGATTGCAGCGTCTTGCCGCACTGATCACAGACGTAGCCGGGA
AAGTGCTCGCGTTTCGTGTGGACATTGTAAGCGCGCCGGCTGCTGAACTT
CTCCGGGCAGCTGGGGCATTGTATGTTGACCGTGTATTCGCCGGAGCTTT
CGTTGTCCTGCTCCTGGTCCTCGCCATCGGATATTATGTACTCTATTGCG
CCGTCCAGATGTTCGTCAAAGTCACTCATGGTATCTTCCTTAAAAAAGTC
TTCCTCCTGGGCCTCTTGCTTGTCATGTGGCAACAGATCCTCCTCCTCTA
TCTCGTGGGCCACCTCCTCTATCTC
BS01532.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-PA | 1374 | CG7928-RA | 568..1374 | 825..19 | 4035 | 100 | Minus |
CG7928-PA | 1374 | CG7928-RA | 551..580 | 821..792 | 150 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:11:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-RA | 1631 | CG7928-RA | 637..1444 | 825..18 | 4040 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30035427..30036234 | 18..825 | 4040 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-01 09:10:57 has no hits.
BS01532.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:05 Download gff for
BS01532.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-PA | 568..1374 | 19..825 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:19:34 Download gff for
BS01532.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-PA | 568..1374 | 19..825 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:15:26 Download gff for
BS01532.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 637..1449 | 12..825 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:54:49 Download gff for
BS01532.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 637..1449 | 12..825 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:54:49 Download gff for
BS01532.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30035422..30036234 | 12..825 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:15:26 Download gff for
BS01532.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25861144..25861956 | 12..825 | 99 | | Plus |
BS01532.5prime Sequence
893 bp (741 high quality bases) assembled on 2005-11-29
> BS01532.5prime
GAAGTTATCAGTCGACATGAATTGCTGCATTTGTCAATTCTCGGTACGCG
TACCGAAGGACATTCACACCGATACCGTCGGACATCCGCCGGTGCTGATC
AGCGAACTGGTACTGCAGTGCACCCGGGGCACGAATTACGTCCTCACGGA
GGAATCGTCGACGATCTGCAAGAAGTGCTGCGAGAAGCTCGCCAGATACC
ACAAGTCCATACAAATAGCGCGCAAGCTGCGAGGGGAGATCCTGGAACTG
ATCCACAGTCCCTACATGTCCAAGGACCACAAGCAGACCTCCTACAAAGA
GGACGATCTCGACCGAGAGACCACCATAAGCAAATTCGATGGGAATATTG
AGGAGGCACAGCAACAGGACGAGGAGGAGCAGGAACTGGAGAGCGTGGGC
ACCACCGTCACCCTGGTCGGTCCCGCCGGCATCGTGGAGGAAGTGGCCGA
AGAGGAGCACACCTTCATTATCAAACAATCAGAGGAGGAGGATGAGTTCC
ACTCCGTAGACTTAGAGCTAGATATCGACAACGAGATTATCATTAACGAA
GAGGAAGCCCACGAGGTAGAGGAGGTGGCCCACGAGATAGAGGAGGTGGC
CCACGAGATAGAGGAGGAGGATCTGTTGCCACATGACAAGCAAGAGGCCC
AGGAGGAAGACTTTTTTAAGGAAGATACCATGAGTGACTTTGACGAACAT
CTGGACGGCGCAATAGAGTACATAATATCCGATGGCGAGGACCAGGAGCA
GGACAACGAAAGCTCCGGCGAATACACGGTCAACATACAATGCCCCAGCT
GCCCGGAGAAGTTCAGCAGCCGGCGCGCTTACAATGTCCACACGAAACGC
GAGCACTTTCCCGGCTACGTCTGTGATCAGTGCGGCAAGACGC
BS01532.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-PA | 1374 | CG7928-RA | 1..877 | 17..893 | 4385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:47:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-RA | 1631 | CG7928-RA | 70..946 | 17..893 | 4385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:47:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30035925..30036801 | 893..17 | 4385 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 05:47:56 has no hits.
BS01532.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:06 Download gff for
BS01532.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-PA | 1..877 | 17..893 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:19:35 Download gff for
BS01532.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-PA | 1..877 | 17..893 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:36:57 Download gff for
BS01532.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 60..946 | 8..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:50:25 Download gff for
BS01532.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 60..946 | 8..893 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:50:25 Download gff for
BS01532.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30035925..30036811 | 8..893 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:36:57 Download gff for
BS01532.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25861647..25862533 | 8..893 | 99 | | Minus |
BS01532.complete Sequence
1408 bp (1408 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634636
> BS01532.complete
GAAGTTATCAGTCGACATGAATTGCTGCATTTGTCAATTCTCGGTACGCG
TACCGAAGGACATTCACACCGATACCGTCGGACATCCGCCGGTGCTGATC
AGCGAACTGGTACTGCAGTGCACCCGGGGCACGAATTACGTCCTCACGGA
GGAATCGTCGACGATCTGCAAGAAGTGCTGCGAGAAGCTCGCCAGATACC
ACAAGTCCATACAAATAGCGCGCAAGCTGCGAGGGGAGATCCTGGAACTG
ATCCACAGTCCCTACATGTCCAAGGACCACAAGCAGACCTCCTACAAAGA
GGACGATCTCGACCGAGAGACCACCATAAGCAAATTCGATGGGAATATTG
AGGAGGCACAGCAACAGGACGAGGAGGAGCAGGAACTGGAGAGCGTGGGC
ACCACCGTCACCCTGGTCGGTCCCGCCGGCATCGTGGAGGAAGTGGCCGA
AGAGGAGCACACCTTCATTATCAAACAATCAGAGGAGGAGGATGAGTTCC
ACTCCGTAGACTTAGAGCTAGATATCGACAACGAGATTATCATTAACGAA
GAGGAAGCCCACGAGGTAGAGGAGGTGGCCCACGAGATAGAGGAGGTGGC
CCACGAGATAGAGGAGGAGGATCTGTTGCCACATGACAAGCAAGAGGCCC
AGGAGGAAGACTTTTTTAAGGAAGATACCATGAGTGACTTTGACGAACAT
CTGGACGGCGCAATAGAGTACATAATATCCGATGGCGAGGACCAGGAGCA
GGACAACGAAAGCTCCGGCGAATACACGGTCAACATACAATGCCCCAGCT
GCCCGGAGAAGTTCAGCAGCCGGCGCGCTTACAATGTCCACACGAAACGC
GAGCACTTTCCCGGCTACGTCTGTGATCAGTGCGGCAAGACGCTGCAATC
GTACTCCGGGTTCATAGGGCACCTGCAGAACCACGAGCCCGTGAAGCAGT
TCGCCTGCCCAGTGTGCCCGGAACGCTTTAGCCGCAAGTTCCGGCTGAAG
CACCACATGGCCTGGCACTCCGGCGAAACGCCATACCAGTGCGATGTCTG
CTCCAAGCGATTCGTTCACAAGGTGGCCCTGTACAAGCACAAGATGATCC
ACGACAGCGAGACCAAACGGCTGGAGTGCCAGGTGTGCGGCTTCAAGACC
CGGACCAAGGCTCACTTGGAGCGGCACATGCGATCCCACACGGGGGACAA
GCCCTTCGCCTGCCCGGTGTGCAACAAGCGCTTCTCCCAGATGTACAACA
TGAAGGCCCATCTGCGGGAGCACGAGAGTCCCGGAACCAACCGCCATCGC
CGCTTCCACTGCTCCAAGTGCACGCATACTTTCATCAACGAGCAGAACTA
TGATGCCCACGTTCAGAGAGACGACTGCACGCCAGTTTAGCGAAGCTTTC
TAGACCAT
BS01532.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:08:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-RA | 1374 | CG7928-PA | 1..1374 | 17..1390 | 6870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:08:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-RA | 1631 | CG7928-RA | 70..1444 | 17..1391 | 6875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:08:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30035427..30036801 | 1391..17 | 6875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:08:14 has no hits.
BS01532.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:41 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 1..1374 | 17..1390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:27 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 36..1425 | 8..1397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:25 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 70..1444 | 17..1392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:41 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 36..1425 | 8..1397 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:55 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 70..1444 | 17..1392 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:55 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30035426..30036801 | 17..1392 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:25 Download gff for
BS01532.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25861148..25862523 | 17..1392 | 99 | | Minus |
BS01532.pep Sequence
Translation from 16 to 1389
> BS01532.pep
MNCCICQFSVRVPKDIHTDTVGHPPVLISELVLQCTRGTNYVLTEESSTI
CKKCCEKLARYHKSIQIARKLRGEILELIHSPYMSKDHKQTSYKEDDLDR
ETTISKFDGNIEEAQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTF
IIKQSEEEDEFHSVDLELDIDNEIIINEEEAHEVEEVAHEIEEVAHEIEE
EDLLPHDKQEAQEEDFFKEDTMSDFDEHLDGAIEYIISDGEDQEQDNESS
GEYTVNIQCPSCPEKFSSRRAYNVHTKREHFPGYVCDQCGKTLQSYSGFI
GHLQNHEPVKQFACPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFV
HKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMRSHTGDKPFACP
VCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKCTHTFINEQNYDAHVQ
RDDCTPV*
BS01532.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-PA | 457 | CG7928-PA | 1..457 | 1..457 | 2489 | 100 | Plus |
crol-PB | 891 | CG14938-PB | 362..550 | 258..451 | 330 | 33.8 | Plus |
crol-PI | 962 | CG14938-PI | 362..550 | 258..451 | 330 | 33.8 | Plus |
crol-PE | 962 | CG14938-PE | 362..550 | 258..451 | 330 | 33.8 | Plus |
crol-PA | 962 | CG14938-PA | 362..550 | 258..451 | 330 | 33.8 | Plus |
crol-PB | 891 | CG14938-PB | 307..494 | 259..451 | 312 | 31.3 | Plus |
crol-PI | 962 | CG14938-PI | 307..494 | 259..451 | 312 | 31.3 | Plus |
crol-PE | 962 | CG14938-PE | 307..494 | 259..451 | 312 | 31.3 | Plus |
crol-PB | 891 | CG14938-PB | 251..466 | 259..451 | 289 | 29.9 | Plus |
crol-PI | 962 | CG14938-PI | 251..466 | 259..451 | 289 | 29.9 | Plus |
crol-PE | 962 | CG14938-PE | 251..466 | 259..451 | 289 | 29.9 | Plus |
crol-PB | 891 | CG14938-PB | 502..684 | 258..440 | 286 | 33.9 | Plus |
crol-PB | 891 | CG14938-PB | 446..634 | 258..451 | 275 | 29.6 | Plus |
crol-PI | 962 | CG14938-PI | 446..634 | 258..451 | 275 | 29.6 | Plus |
crol-PE | 962 | CG14938-PE | 446..634 | 258..451 | 275 | 29.6 | Plus |
crol-PB | 891 | CG14938-PB | 221..379 | 284..448 | 262 | 34.5 | Plus |
crol-PI | 962 | CG14938-PI | 221..379 | 284..448 | 262 | 34.5 | Plus |
crol-PE | 962 | CG14938-PE | 221..379 | 284..448 | 262 | 34.5 | Plus |
crol-PI | 962 | CG14938-PI | 530..722 | 258..450 | 246 | 28.3 | Plus |
crol-PE | 962 | CG14938-PE | 530..722 | 258..450 | 246 | 28.3 | Plus |