Clone BS01532 Report

Search the DGRC for BS01532

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:15
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG7928-RA
Protein status:BS01532.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS01532.3prime Sequence

825 bp (755 high quality bases) assembled on 2005-11-29

> BS01532.3prime
ATGGTCTAGAAAGCTTCGCTAAACTGGCGTGCAGTCGTCTCTCTGAACGT
GGGCATCATAGTTCTGCTCGTTGATGAAAGTATGCGTGCACTTGGAGCAG
TGGAAGCGGCGATGGCGGTTGGTTCCGGGACTCTCGTGCTCCCGCAGATG
GGCCTTCATGTTGTACATCTGGGAGAAGCGCTTGTTGCACACCGGGCAGG
CGAAGGGCTTGTCCCCCGTGTGGGATCGCATGTGCCGCTCCAAGTGAGCC
TTGGTCCGGGTCTTGAAGCCGCACACCTGGCACTCCAGCCGTTTGGTCTC
GCTGTCGTGGATCATCTTGTGCTTGTACAGGGCCACCTTGTGAACGAATC
GCTTGGAGCAGACATCGCACTGGTATGGCGTTTCGCCGGAGTGCCAGGCC
ATGTGGTGCTTCAGCCGGAACTTGCGGCTAAAGCGTTCCGGGCACACTGG
GCAGGCGAACTGCTTCACGGGCTCGTGGTTCTGCAGGTGCCCTATGAACC
CGGAGTACGATTGCAGCGTCTTGCCGCACTGATCACAGACGTAGCCGGGA
AAGTGCTCGCGTTTCGTGTGGACATTGTAAGCGCGCCGGCTGCTGAACTT
CTCCGGGCAGCTGGGGCATTGTATGTTGACCGTGTATTCGCCGGAGCTTT
CGTTGTCCTGCTCCTGGTCCTCGCCATCGGATATTATGTACTCTATTGCG
CCGTCCAGATGTTCGTCAAAGTCACTCATGGTATCTTCCTTAAAAAAGTC
TTCCTCCTGGGCCTCTTGCTTGTCATGTGGCAACAGATCCTCCTCCTCTA
TCTCGTGGGCCACCTCCTCTATCTC

BS01532.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-PA 1374 CG7928-RA 568..1374 825..19 4035 100 Minus
CG7928-PA 1374 CG7928-RA 551..580 821..792 150 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 09:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-RA 1631 CG7928-RA 637..1444 825..18 4040 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 09:10:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30035427..30036234 18..825 4040 100 Plus
Blast to na_te.dros performed on 2015-02-01 09:10:57 has no hits.

BS01532.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:05 Download gff for BS01532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-PA 568..1374 19..825 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:19:34 Download gff for BS01532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-PA 568..1374 19..825 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:15:26 Download gff for BS01532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 637..1449 12..825 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:54:49 Download gff for BS01532.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 637..1449 12..825 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:54:49 Download gff for BS01532.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30035422..30036234 12..825 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:15:26 Download gff for BS01532.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25861144..25861956 12..825 99   Plus

BS01532.5prime Sequence

893 bp (741 high quality bases) assembled on 2005-11-29

> BS01532.5prime
GAAGTTATCAGTCGACATGAATTGCTGCATTTGTCAATTCTCGGTACGCG
TACCGAAGGACATTCACACCGATACCGTCGGACATCCGCCGGTGCTGATC
AGCGAACTGGTACTGCAGTGCACCCGGGGCACGAATTACGTCCTCACGGA
GGAATCGTCGACGATCTGCAAGAAGTGCTGCGAGAAGCTCGCCAGATACC
ACAAGTCCATACAAATAGCGCGCAAGCTGCGAGGGGAGATCCTGGAACTG
ATCCACAGTCCCTACATGTCCAAGGACCACAAGCAGACCTCCTACAAAGA
GGACGATCTCGACCGAGAGACCACCATAAGCAAATTCGATGGGAATATTG
AGGAGGCACAGCAACAGGACGAGGAGGAGCAGGAACTGGAGAGCGTGGGC
ACCACCGTCACCCTGGTCGGTCCCGCCGGCATCGTGGAGGAAGTGGCCGA
AGAGGAGCACACCTTCATTATCAAACAATCAGAGGAGGAGGATGAGTTCC
ACTCCGTAGACTTAGAGCTAGATATCGACAACGAGATTATCATTAACGAA
GAGGAAGCCCACGAGGTAGAGGAGGTGGCCCACGAGATAGAGGAGGTGGC
CCACGAGATAGAGGAGGAGGATCTGTTGCCACATGACAAGCAAGAGGCCC
AGGAGGAAGACTTTTTTAAGGAAGATACCATGAGTGACTTTGACGAACAT
CTGGACGGCGCAATAGAGTACATAATATCCGATGGCGAGGACCAGGAGCA
GGACAACGAAAGCTCCGGCGAATACACGGTCAACATACAATGCCCCAGCT
GCCCGGAGAAGTTCAGCAGCCGGCGCGCTTACAATGTCCACACGAAACGC
GAGCACTTTCCCGGCTACGTCTGTGATCAGTGCGGCAAGACGC

BS01532.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-PA 1374 CG7928-RA 1..877 17..893 4385 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-RA 1631 CG7928-RA 70..946 17..893 4385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:47:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30035925..30036801 893..17 4385 100 Minus
Blast to na_te.dros performed on 2015-02-12 05:47:56 has no hits.

BS01532.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:06 Download gff for BS01532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-PA 1..877 17..893 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:19:35 Download gff for BS01532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-PA 1..877 17..893 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:36:57 Download gff for BS01532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 60..946 8..893 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:50:25 Download gff for BS01532.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 60..946 8..893 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:50:25 Download gff for BS01532.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30035925..30036811 8..893 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:36:57 Download gff for BS01532.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25861647..25862533 8..893 99   Minus

BS01532.complete Sequence

1408 bp (1408 high quality bases) assembled on 2005-06-23

GenBank Submission: FJ634636

> BS01532.complete
GAAGTTATCAGTCGACATGAATTGCTGCATTTGTCAATTCTCGGTACGCG
TACCGAAGGACATTCACACCGATACCGTCGGACATCCGCCGGTGCTGATC
AGCGAACTGGTACTGCAGTGCACCCGGGGCACGAATTACGTCCTCACGGA
GGAATCGTCGACGATCTGCAAGAAGTGCTGCGAGAAGCTCGCCAGATACC
ACAAGTCCATACAAATAGCGCGCAAGCTGCGAGGGGAGATCCTGGAACTG
ATCCACAGTCCCTACATGTCCAAGGACCACAAGCAGACCTCCTACAAAGA
GGACGATCTCGACCGAGAGACCACCATAAGCAAATTCGATGGGAATATTG
AGGAGGCACAGCAACAGGACGAGGAGGAGCAGGAACTGGAGAGCGTGGGC
ACCACCGTCACCCTGGTCGGTCCCGCCGGCATCGTGGAGGAAGTGGCCGA
AGAGGAGCACACCTTCATTATCAAACAATCAGAGGAGGAGGATGAGTTCC
ACTCCGTAGACTTAGAGCTAGATATCGACAACGAGATTATCATTAACGAA
GAGGAAGCCCACGAGGTAGAGGAGGTGGCCCACGAGATAGAGGAGGTGGC
CCACGAGATAGAGGAGGAGGATCTGTTGCCACATGACAAGCAAGAGGCCC
AGGAGGAAGACTTTTTTAAGGAAGATACCATGAGTGACTTTGACGAACAT
CTGGACGGCGCAATAGAGTACATAATATCCGATGGCGAGGACCAGGAGCA
GGACAACGAAAGCTCCGGCGAATACACGGTCAACATACAATGCCCCAGCT
GCCCGGAGAAGTTCAGCAGCCGGCGCGCTTACAATGTCCACACGAAACGC
GAGCACTTTCCCGGCTACGTCTGTGATCAGTGCGGCAAGACGCTGCAATC
GTACTCCGGGTTCATAGGGCACCTGCAGAACCACGAGCCCGTGAAGCAGT
TCGCCTGCCCAGTGTGCCCGGAACGCTTTAGCCGCAAGTTCCGGCTGAAG
CACCACATGGCCTGGCACTCCGGCGAAACGCCATACCAGTGCGATGTCTG
CTCCAAGCGATTCGTTCACAAGGTGGCCCTGTACAAGCACAAGATGATCC
ACGACAGCGAGACCAAACGGCTGGAGTGCCAGGTGTGCGGCTTCAAGACC
CGGACCAAGGCTCACTTGGAGCGGCACATGCGATCCCACACGGGGGACAA
GCCCTTCGCCTGCCCGGTGTGCAACAAGCGCTTCTCCCAGATGTACAACA
TGAAGGCCCATCTGCGGGAGCACGAGAGTCCCGGAACCAACCGCCATCGC
CGCTTCCACTGCTCCAAGTGCACGCATACTTTCATCAACGAGCAGAACTA
TGATGCCCACGTTCAGAGAGACGACTGCACGCCAGTTTAGCGAAGCTTTC
TAGACCAT

BS01532.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-RA 1374 CG7928-PA 1..1374 17..1390 6870 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-RA 1631 CG7928-RA 70..1444 17..1391 6875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30035427..30036801 1391..17 6875 100 Minus
Blast to na_te.dros performed on 2014-11-27 07:08:14 has no hits.

BS01532.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:41 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 1..1374 17..1390 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:27 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 36..1425 8..1397 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:25 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 70..1444 17..1392 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:41 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 36..1425 8..1397 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:03:55 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
CG7928-RA 70..1444 17..1392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:03:55 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30035426..30036801 17..1392 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:25 Download gff for BS01532.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25861148..25862523 17..1392 99   Minus

BS01532.pep Sequence

Translation from 16 to 1389

> BS01532.pep
MNCCICQFSVRVPKDIHTDTVGHPPVLISELVLQCTRGTNYVLTEESSTI
CKKCCEKLARYHKSIQIARKLRGEILELIHSPYMSKDHKQTSYKEDDLDR
ETTISKFDGNIEEAQQQDEEEQELESVGTTVTLVGPAGIVEEVAEEEHTF
IIKQSEEEDEFHSVDLELDIDNEIIINEEEAHEVEEVAHEIEEVAHEIEE
EDLLPHDKQEAQEEDFFKEDTMSDFDEHLDGAIEYIISDGEDQEQDNESS
GEYTVNIQCPSCPEKFSSRRAYNVHTKREHFPGYVCDQCGKTLQSYSGFI
GHLQNHEPVKQFACPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFV
HKVALYKHKMIHDSETKRLECQVCGFKTRTKAHLERHMRSHTGDKPFACP
VCNKRFSQMYNMKAHLREHESPGTNRHRRFHCSKCTHTFINEQNYDAHVQ
RDDCTPV*

BS01532.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7928-PA 457 CG7928-PA 1..457 1..457 2489 100 Plus
crol-PB 891 CG14938-PB 362..550 258..451 330 33.8 Plus
crol-PI 962 CG14938-PI 362..550 258..451 330 33.8 Plus
crol-PE 962 CG14938-PE 362..550 258..451 330 33.8 Plus
crol-PA 962 CG14938-PA 362..550 258..451 330 33.8 Plus
crol-PB 891 CG14938-PB 307..494 259..451 312 31.3 Plus
crol-PI 962 CG14938-PI 307..494 259..451 312 31.3 Plus
crol-PE 962 CG14938-PE 307..494 259..451 312 31.3 Plus
crol-PB 891 CG14938-PB 251..466 259..451 289 29.9 Plus
crol-PI 962 CG14938-PI 251..466 259..451 289 29.9 Plus
crol-PE 962 CG14938-PE 251..466 259..451 289 29.9 Plus
crol-PB 891 CG14938-PB 502..684 258..440 286 33.9 Plus
crol-PB 891 CG14938-PB 446..634 258..451 275 29.6 Plus
crol-PI 962 CG14938-PI 446..634 258..451 275 29.6 Plus
crol-PE 962 CG14938-PE 446..634 258..451 275 29.6 Plus
crol-PB 891 CG14938-PB 221..379 284..448 262 34.5 Plus
crol-PI 962 CG14938-PI 221..379 284..448 262 34.5 Plus
crol-PE 962 CG14938-PE 221..379 284..448 262 34.5 Plus
crol-PI 962 CG14938-PI 530..722 258..450 246 28.3 Plus
crol-PE 962 CG14938-PE 530..722 258..450 246 28.3 Plus