Clone Sequence Records
BS01546.3prime Sequence
838 bp (803 high quality bases) assembled on 2005-11-29
> BS01546.3prime
ATGGTCTAGAAAGCTTCGCTAAACGGACAGATTGGTGCATGCACCATTAG
ATTTAGGTGCATGTGCCTCCCACCAGTCAATGGCATCGATCATGCTCTCG
TCCGAAAGGCAGCCAGCGGTTGTATTGTTGGGCTGATCTTGCTGCAAAAT
ATCGCTGAATTCCTTCTTGAATCCGGGAAGGACTACGTTGTCGTAGAAGC
TCACGGGCTCCTGGTCGTAGAACGCGGGTAAAATAGGCGACGATCCCAGG
TTCTGAACTTGCTGCTGCTGCTGCGGGGAAGTCTGTGCGTTGCTGCTGCT
GCTAATGTTGGTACTGACGTATTCCTGTTTGATTACTTGCTGTTGCAGCG
GTGTGGCACACGTCTGTGTCTGTAACAGCAATTCAGTCGAGGCGACAGGT
GAAACTGGAGAAGAGCAGGGACTTCTTACCACCTTTTGTGGCACGGGCGA
TCGCGATAACTGGCCCGAAGCAGCTGTTTCTTCAAGTTTTTGCTCGTGAC
TCAAATCGCCCAATAAGTCAGTCGTCAGCAGTTGGTAGGTGTTGGTTCCT
GGTATTCTGATGTATTGCAACCCATTTAATGTAGTCAAACTAGGCAGGAG
ATCACTGGCTTGCGGAGGGTTTAGCATATCCTCGGATAAAGTTTGTTGGA
CAGTCTGTTGCTCATCCATTTCGTAGTTGCTCAGCGAGTCGTCGAAATGT
TCATCCAGACAATCGAATTCGTCCTTAATAAACATAAAGCTATCATCGCC
GGAACCAGAACTATTCCCCTGACTGTTGAGAGGTGGAAAATCAAATCCCA
GCAGTTTTTCCAAACTTCTTATGTACTCTACGGCCATG
BS01546.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3258-PA | 1461 | ase-RA | 642..1461 | 838..19 | 4100 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:47:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-RA | 2430 | CG3258-RA | 851..1671 | 838..18 | 4105 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 461597..462417 | 838..18 | 4105 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 16:47:19 has no hits.
BS01546.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:27 Download gff for
BS01546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-PA | 377..394 | 558..575 | 77 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:03 Download gff for
BS01546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3258-PA | 642..1461 | 19..838 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 11:29:27 Download gff for
BS01546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 851..1678 | 10..838 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 17:54:38 Download gff for
BS01546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 851..1678 | 10..838 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 17:54:38 Download gff for
BS01546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 461597..462424 | 10..838 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 11:29:27 Download gff for
BS01546.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 355630..356457 | 10..838 | 99 | | Minus |
BS01546.5prime Sequence
923 bp (813 high quality bases) assembled on 2005-11-29
> BS01546.5prime
GAAGTTATCAGTCGACATGGCCGCCTTAAGCTTCAGCCCATCACCTCCTC
CAAAAGAAAACCCCAAGGAAAACCCCAATCCAGGAATAAAAACCACGTTG
AAACCTTTTGGAAAGATTACCGTTCACAATGTTTTAAGTGAGAGTGGCGC
CAACGCCTTGCAACAGCATATAGCCAATCAGAACACCATTATTCGAAAGA
TCCGGGACTTTGGCATGCTGGGCGCTGTTCAAAGTGCCGCAGCCAGCACA
ACTAACACCACACCCATATCCAGTCAACGGAAGAGGCCCCTGGGAGAATC
CCAAAAGCAGAACCGGCACAACCAGCAGAATCAACAGCTTAGTAAAACAT
CAGTGCCTGCTAAAAAATGCAAGACCAACAAGAAGTTGGCGGTTGAAAGG
CCCCCAAAAGCAGGAACTATAAGCCACCCTCATAAAAGCCAAAGCGATCA
GAGTTTTGGGACTCCTGGAAGAAAGGGTTTGCCTTTGCCACAAGCCGTTG
CCCGTAGAAACGCTAGGGAAAGAAATCGCGTGAAGCAGGTTAACAATGGA
TTTGCTTTACTCCGGGAGAAGATCCCAGAAGAAGTATCTGAGGCTTTTGA
GGCCCAGGGGGCGGGTAGAGGAGCAAGCAAGAAGCTATCCAAAGTGGAGA
CCCTCCGCATGGCCGTAGAGTACATAAGAAGTTTGGAAAAACTGCTGGGA
TTTGATTTTCCACCTCTCAACAGTCAGGGGAATAGTTCTGGTTCCGGCGA
TGATAGCTTTATGTTTATTAAGGACGAATTCGATTGTCTGGATGAACATT
TCGACGACTCGCTGAGCAACTACGAAATGGATGAGCAACAGACTGTCCAA
CAAACTTTATCCGAGGATATGCTAAACCCCTCCGCAAGCCAGTGATCTCC
TGCCTAGTTTGACTACATTAAAT
BS01546.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3258-PA | 1461 | ase-RA | 1..863 | 17..879 | 4315 | 100 | Plus |
| CG3258-PA | 1461 | ase-RA | 861..906 | 878..923 | 230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-RA | 2430 | CG3258-RA | 210..1115 | 17..923 | 4510 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 460956..461861 | 17..923 | 4485 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-13 02:42:24 has no hits.
BS01546.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:28 Download gff for
BS01546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-PA | 545..567 | 634..659 | 76 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:04 Download gff for
BS01546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3258-PA | 1..906 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 10:52:02 Download gff for
BS01546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1115 | 17..923 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:04:35 Download gff for
BS01546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1115 | 17..923 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:04:35 Download gff for
BS01546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 460956..461861 | 17..923 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 10:52:02 Download gff for
BS01546.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 354989..355894 | 17..923 | 99 | | Plus |
BS01546.complete Sequence
1495 bp (1495 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634642
> BS01546.complete
GAAGTTATCAGTCGACATGGCCGCCTTAAGCTTCAGCCCATCACCTCCTC
CAAAAGAAAACCCCAAGGAAAACCCCAATCCAGGAATAAAAACCACGTTG
AAACCTTTTGGAAAGATTACCGTTCACAATGTTTTAAGTGAGAGTGGCGC
CAACGCCTTGCAACAGCATATAGCCAATCAGAACACCATTATTCGAAAGA
TCCGGGACTTTGGCATGCTGGGCGCTGTTCAAAGTGCCGCAGCCAGCACA
ACTAACACCACACCCATATCCAGTCAACGGAAGAGGCCCCTGGGAGAATC
CCAAAAGCAGAACCGGCACAACCAGCAGAATCAACAGCTTAGTAAAACAT
CAGTGCCTGCTAAAAAATGCAAGACCAACAAGAAGTTGGCGGTTGAAAGG
CCCCCAAAAGCAGGAACTATAAGCCACCCTCATAAAAGCCAAAGCGATCA
GAGTTTTGGGACTCCTGGAAGAAAGGGTTTGCCTTTGCCACAAGCCGTTG
CCCGTAGAAACGCTAGGGAAAGAAATCGCGTGAAGCAGGTTAACAATGGA
TTTGCTTTACTCCGGGAGAAGATCCCAGAAGAAGTATCTGAGGCTTTTGA
GGCCCAGGGGGCGGGTAGAGGAGCAAGCAAGAAGCTATCCAAAGTGGAGA
CCCTCCGCATGGCCGTAGAGTACATAAGAAGTTTGGAAAAACTGCTGGGA
TTTGATTTTCCACCTCTCAACAGTCAGGGGAATAGTTCTGGTTCCGGCGA
TGATAGCTTTATGTTTATTAAGGACGAATTCGATTGTCTGGATGAACATT
TCGACGACTCGCTGAGCAACTACGAAATGGATGAGCAACAGACTGTCCAA
CAAACTTTATCCGAGGATATGCTAAACCCTCCGCAAGCCAGTGATCTCCT
GCCTAGTTTGACTACATTAAATGGGTTGCAATACATCAGAATACCAGGAA
CCAACACCTACCAACTGCTGACGACTGACTTATTGGGCGATTTGAGTCAC
GAGCAAAAACTTGAAGAAACAGCTGCTTCGGGCCAGTTATCGCGATCGCC
CGTGCCACAAAAGGTGGTAAGAAGTCCCTGCTCTTCTCCAGTTTCACCTG
TCGCCTCGACTGAATTGCTGTTACAGACACAGACGTGTGCCACACCGCTG
CAACAGCAAGTAATCAAACAGGAATACGTCAGTACCAACATTAGCAGCAG
CAGCAACGCACAGACTTCCCCGCAGCAGCAGCAGCAAGTTCAGAACCTGG
GATCGTCGCCTATTTTACCCGCGTTCTACGACCAGGAGCCCGTGAGCTTC
TACGACAACGTAGTCCTTCCCGGATTCAAGAAGGAATTCAGCGATATTTT
GCAGCAAGATCAGCCCAACAATACAACCGCTGGCTGCCTTTCGGACGAGA
GCATGATCGATGCCATTGACTGGTGGGAGGCACATGCACCTAAATCTAAT
GGTGCATGCACCAATCTGTCCGTTTAGCGAAGCTTTCTAGACCAT
BS01546.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-RA | 1461 | CG3258-PA | 1..1461 | 17..1477 | 7305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-RA | 2430 | CG3258-RA | 210..1671 | 17..1478 | 7310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 460956..462417 | 17..1478 | 7310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:49:28 has no hits.
BS01546.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:34 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 1..1461 | 17..1477 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:18 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 457..1925 | 17..1486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:29 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1671 | 17..1479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:35 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 457..1925 | 17..1486 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:55:21 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ase-RA | 210..1671 | 17..1479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:21 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 460956..462417 | 17..1479 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:29 Download gff for
BS01546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 354989..356450 | 17..1479 | 99 | | Plus |
BS01546.pep Sequence
Translation from 16 to 1476
> BS01546.pep
MAALSFSPSPPPKENPKENPNPGIKTTLKPFGKITVHNVLSESGANALQQ
HIANQNTIIRKIRDFGMLGAVQSAAASTTNTTPISSQRKRPLGESQKQNR
HNQQNQQLSKTSVPAKKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTP
GRKGLPLPQAVARRNARERNRVKQVNNGFALLREKIPEEVSEAFEAQGAG
RGASKKLSKVETLRMAVEYIRSLEKLLGFDFPPLNSQGNSSGSGDDSFMF
IKDEFDCLDEHFDDSLSNYEMDEQQTVQQTLSEDMLNPPQASDLLPSLTT
LNGLQYIRIPGTNTYQLLTTDLLGDLSHEQKLEETAASGQLSRSPVPQKV
VRSPCSSPVSPVASTELLLQTQTCATPLQQQVIKQEYVSTNISSSSNAQT
SPQQQQQVQNLGSSPILPAFYDQEPVSFYDNVVLPGFKKEFSDILQQDQP
NNTTAGCLSDESMIDAIDWWEAHAPKSNGACTNLSV*
BS01546.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ase-PA | 486 | CG3258-PA | 1..486 | 1..486 | 2499 | 100 | Plus |
| l(1)sc-PA | 257 | CG3839-PA | 25..167 | 96..247 | 222 | 40.1 | Plus |
| sc-PA | 345 | CG3827-PA | 69..198 | 130..268 | 210 | 41.4 | Plus |
| ac-PA | 201 | CG3796-PA | 25..94 | 160..227 | 203 | 64.3 | Plus |
