Clone Sequence Records
BS01547.3prime Sequence
870 bp (794 high quality bases) assembled on 2005-11-29
> BS01547.3prime
ATGGTCTAGAAAGCTTCGTTAGAACGTTGTCAAAGCGCCCGCGCCCAGAC
CGTAGCCCACTCCCTTGGGTCCAAAATTGCGGCCGTAGCAGGCTCGGCAG
TAGATATCGCCGTCGGGTCCATCGTTCAGGTTGGTCGAGTCCAGCGATTT
GCGGCAATCCGAGCAGTAGAAGCACCTCTTGTGCCAGATCCTGGTCTTGC
TGATCATCTGCTCGGCGGCGAACACGGCGAAACCGCAACGCGGGCAGCCG
CCCGAAGTCTTGGGTCCGGCCAGAGGACGGCCATCTGGGAACTGGATGGT
GCTCTCGCCACTGGTTGACACTAGAGTGGGGGCGTGGCCGTAACCAAAGC
CCTTGGGGCCGAAGAGCTTGCCGTAGCAGGCGCGGCAGTGGATGTCGCCA
TCGGGTCCATCGCAGGCCAGGACCGAGTCCAATGGCCGGTGGCAGTCGGC
GCAGTTGTAGCACTTCTTGTGCCACACCTTGCCCTTGGACAGCTGTTGCT
CGGCGGCGAATACGGCTCCTCCGCACCGGGGACAGCCTTCGCCGTCACGG
GCCTTAATTGACGTGGTGTCCGGGTTATAGAAGGGCCTGTTGGCGCTGAT
CTGATCCTCGGTCAAGCCATCGGTCTGCAGGAAACCAGAGCCGCATGCGA
ATCCATAGCCATGTGGTCCCCACTTCTTGCCGTAGCAGGTGCGGCAGTAC
ACATCACGATCGGGACCATCACTGGCATTGATCGAGTCCAGAGTCTTGTG
GCAATCCTTGCAGTTGAAGCACTTCTTGTGCCACTCCCGACCCTTGGAAA
GCTTCTGCTCCGCTGCGTAGACCACACCGCCGCAACGTGGGCAACCCTCA
CCCGGACGGGCCTGGATCTT
BS01547.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1019-PA | 1488 | Mlp84B-RA | 637..1488 | 870..19 | 4260 | 100 | Minus |
| CG1019-PB | 1488 | Mlp84B-RB | 637..1488 | 870..19 | 4260 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlp84B-RC | 3071 | CG1019-RC | 798..1649 | 870..19 | 4260 | 100 | Minus |
| Mlp84B-RB | 2382 | CG1019-RB | 781..1632 | 870..19 | 4260 | 100 | Minus |
| Mlp84B-RA | 2399 | CG1019-RA | 798..1649 | 870..19 | 4260 | 100 | Minus |
| Mlp84B-RC | 3071 | CG1019-RC | 805..992 | 554..367 | 220 | 74.5 | Minus |
| Mlp84B-RC | 3071 | CG1019-RC | 1114..1301 | 863..676 | 220 | 74.5 | Minus |
| Mlp84B-RB | 2382 | CG1019-RB | 788..975 | 554..367 | 220 | 74.5 | Minus |
| Mlp84B-RB | 2382 | CG1019-RB | 1097..1284 | 863..676 | 220 | 74.5 | Minus |
| Mlp84B-RC | 3071 | CG1019-RC | 885..989 | 186..82 | 180 | 78.1 | Minus |
| Mlp84B-RC | 3071 | CG1019-RC | 1482..1586 | 783..679 | 180 | 78.1 | Minus |
| Mlp84B-RB | 2382 | CG1019-RB | 868..972 | 186..82 | 180 | 78.1 | Minus |
| Mlp84B-RB | 2382 | CG1019-RB | 1465..1569 | 783..679 | 180 | 78.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 23:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7114272..7115123 | 19..870 | 4260 | 100 | Plus |
| 2R | 25286936 | 2R | 24077095..24077356 | 573..312 | 410 | 77.1 | Minus |
| 2R | 25286936 | 2R | 24076718..24076945 | 843..616 | 330 | 76.3 | Minus |
| 2R | 25286936 | 2R | 24077477..24077677 | 250..50 | 255 | 75.1 | Minus |
| 3R | 32079331 | 3R | 7114620..7114807 | 676..863 | 220 | 74.5 | Plus |
| 3R | 32079331 | 3R | 7114929..7115116 | 367..554 | 220 | 74.5 | Plus |
Blast to na_te.dros performed on 2015-02-10 23:25:14 has no hits.
BS01547.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:29 Download gff for
BS01547.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1019-PA | 637..1488 | 19..870 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:05 Download gff for
BS01547.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1019-PB | 637..1488 | 19..870 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 19:41:40 Download gff for
BS01547.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RA | 798..1658 | 7..870 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:38:26 Download gff for
BS01547.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RA | 798..1658 | 7..870 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:38:26 Download gff for
BS01547.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7114258..7115123 | 7..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 19:41:40 Download gff for
BS01547.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2939980..2940845 | 7..870 | 99 | | Plus |
BS01547.5prime Sequence
760 bp (759 high quality bases) assembled on 2005-11-29
> BS01547.5prime
GAAGTTATCAGTCGACATGCCTTCCTTCCAACCGATCGAGGCCCCCAAGT
GTCCGCGCTGCGGCAAGAGTGTCTACGCTGCCGAAGAGCGTCTGGCTGGC
GGCTATGTATTCCACAAGAACTGCTTCAAGTGCGGAATGTGCAACAAATC
CCTGGACTCCACCAACTGCACAGAGCACGAGCGCGAGCTCTACTGCAAGA
CGTGCCACGGTCGCAAGTTCGGGCCGAAAGGTTACGGCTTCGGCACTGGA
GCTGGCACCCTCTCCATGGACAACGGGTCACAGTTCCTGCGCGAGAACGG
CGATGTGCCGTCCGTAAGGAATGGAGCCCGCCTGGAACCCAGGGCTATTG
CTCGTGCCCCCGAAGGTGAGGGCTGTCCTCGTTGCGGTGGCTATGTGTAC
GCCGCCGAACAGATGTTAGCCCGCGGTCGCAGCTGGCACAAGGAGTGCTT
CAAGTGCGGTACCTGCAAGAAGGGTCTGGACTCGATCCTGTGCTGCGAGG
CTCCGGACAAGAACATCTACTGCAAGGGCTGCTATGCCAAGAAGTTTGGA
CCCAAGGGCTATGGTTATGGCCAGGGCGGTGGTGCTCTCCAGTCCGACTG
CTATGCTCACGACGACGGAGCACCGCAAATCCGTGCCGCCATTGATGTGG
ACAAGATCCAGGCCCGTCCGGGTGAGGGTTGCCCACGTTGCGGCGGTGTG
GTCTACGCAGCGGAGCAGAAGCTTTCCAAGGGTCGGGAGTGGCACAAGAA
GTGCTTCAAC
BS01547.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1019-PA | 1488 | Mlp84B-RA | 1..744 | 17..760 | 3720 | 100 | Plus |
| CG1019-PB | 1488 | Mlp84B-RB | 1..744 | 17..760 | 3720 | 100 | Plus |
| CG33149-PA | 279 | Mlp60A-RA | 90..162 | 109..181 | 190 | 90.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlp84B-RC | 3071 | CG1019-RC | 162..905 | 17..760 | 3720 | 100 | Plus |
| Mlp84B-RB | 2382 | CG1019-RB | 145..888 | 17..760 | 3720 | 100 | Plus |
| Mlp84B-RA | 2399 | CG1019-RA | 162..905 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:49:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7115016..7115759 | 760..17 | 3720 | 100 | Minus |
| 2R | 25286936 | 2R | 24075451..24075586 | 137..272 | 245 | 78.7 | Plus |
| 2R | 25286936 | 2R | 24075245..24075336 | 42..133 | 190 | 80.4 | Plus |
Blast to na_te.dros performed on 2015-02-12 05:50:02 has no hits.
BS01547.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:30 Download gff for
BS01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1019-PA | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:06 Download gff for
BS01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1019-PB | 1..744 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 11:37:21 Download gff for
BS01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RA | 154..905 | 9..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:56:14 Download gff for
BS01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RA | 154..905 | 9..760 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:56:14 Download gff for
BS01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7115016..7115767 | 9..760 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 11:37:21 Download gff for
BS01547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2940738..2941489 | 9..760 | 99 | | Minus |
BS01547.complete Sequence
1522 bp (1522 high quality bases) assembled on 2005-06-23
GenBank Submission: FJ634643
> BS01547.complete
GAAGTTATCAGTCGACATGCCTTCCTTCCAACCGATCGAGGCCCCCAAGT
GTCCGCGCTGCGGCAAGAGTGTCTACGCTGCCGAAGAGCGTCTGGCTGGC
GGCTATGTATTCCACAAGAACTGCTTCAAGTGCGGAATGTGCAACAAATC
CCTGGACTCCACCAACTGCACAGAGCACGAGCGCGAGCTCTACTGCAAGA
CGTGCCACGGTCGCAAGTTCGGGCCGAAAGGTTACGGCTTCGGCACTGGA
GCTGGCACCCTCTCCATGGACAACGGGTCACAGTTCCTGCGCGAGAACGG
CGATGTGCCGTCCGTAAGGAATGGAGCCCGCCTGGAACCCAGGGCTATTG
CTCGTGCCCCCGAAGGTGAGGGCTGTCCTCGTTGCGGTGGCTATGTGTAC
GCCGCCGAACAGATGTTAGCCCGCGGTCGCAGCTGGCACAAGGAGTGCTT
CAAGTGCGGTACCTGCAAGAAGGGTCTGGACTCGATCCTGTGCTGCGAGG
CTCCGGACAAGAACATCTACTGCAAGGGCTGCTATGCCAAGAAGTTTGGA
CCCAAGGGCTATGGTTATGGCCAGGGCGGTGGTGCTCTCCAGTCCGACTG
CTATGCTCACGACGACGGAGCACCGCAAATCCGTGCCGCCATTGATGTGG
ACAAGATCCAGGCCCGTCCGGGTGAGGGTTGCCCACGTTGCGGCGGTGTG
GTCTACGCAGCGGAGCAGAAGCTTTCCAAGGGTCGGGAGTGGCACAAGAA
GTGCTTCAACTGCAAGGATTGCCACAAGACTCTGGACTCGATCAATGCCA
GTGATGGTCCCGATCGTGATGTGTACTGCCGCACCTGCTACGGCAAGAAG
TGGGGACCACATGGCTATGGATTCGCATGCGGCTCTGGTTTCCTGCAGAC
CGATGGCTTGACCGAGGATCAGATCAGCGCCAACAGGCCCTTCTATAACC
CGGACACCACGTCAATTAAGGCCCGTGACGGCGAAGGCTGTCCCCGGTGC
GGAGGAGCCGTATTCGCCGCCGAGCAACAGCTGTCCAAGGGCAAGGTGTG
GCACAAGAAGTGCTACAACTGCGCCGACTGCCACCGGCCATTGGACTCGG
TCCTGGCCTGCGATGGACCCGATGGCGACATCCACTGCCGCGCCTGCTAC
GGCAAGCTCTTCGGCCCCAAGGGCTTTGGTTACGGCCACGCCCCCACTCT
AGTGTCAACCAGTGGCGAGAGCACCATCCAGTTCCCAGATGGCCGTCCTC
TGGCCGGACCCAAGACTTCGGGCGGCTGCCCGCGTTGCGGTTTCGCCGTG
TTCGCCGCCGAGCAGATGATCAGCAAGACCAGGATCTGGCACAAGAGGTG
CTTCTACTGCTCGGATTGCCGCAAATCGCTGGACTCGACCAACCTGAACG
ATGGACCCGACGGCGATATCTACTGCCGAGCCTGCTACGGCCGCAATTTT
GGACCCAAGGGAGTGGGCTACGGTCTGGGCGCGGGCGCTTTGACAACGTT
CTAACGAAGCTTTCTAGACCAT
BS01547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:14:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlp84B-RC | 1488 | CG1019-PC | 1..1488 | 17..1504 | 7440 | 100 | Plus |
| Mlp84B-RB | 1488 | CG1019-PB | 1..1488 | 17..1504 | 7440 | 100 | Plus |
| Mlp84B-RA | 1488 | CG1019-PA | 1..1488 | 17..1504 | 7440 | 100 | Plus |
| Mlp84B-RC | 1488 | CG1019-PC | 644..831 | 969..1156 | 220 | 74.5 | Plus |
| Mlp84B-RC | 1488 | CG1019-PC | 953..1140 | 660..847 | 220 | 74.5 | Plus |
| Mlp84B-RB | 1488 | CG1019-PB | 644..831 | 969..1156 | 220 | 74.5 | Plus |
| Mlp84B-RB | 1488 | CG1019-PB | 953..1140 | 660..847 | 220 | 74.5 | Plus |
| Mlp84B-RC | 1488 | CG1019-PC | 724..828 | 1337..1441 | 180 | 78.1 | Plus |
| Mlp84B-RC | 1488 | CG1019-PC | 1321..1425 | 740..844 | 180 | 78.1 | Plus |
| Mlp84B-RB | 1488 | CG1019-PB | 724..828 | 1337..1441 | 180 | 78.1 | Plus |
| Mlp84B-RB | 1488 | CG1019-PB | 1321..1425 | 740..844 | 180 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlp84B-RC | 3071 | CG1019-RC | 162..1649 | 17..1504 | 7440 | 100 | Plus |
| Mlp84B-RB | 2382 | CG1019-RB | 145..1632 | 17..1504 | 7440 | 100 | Plus |
| Mlp84B-RA | 2399 | CG1019-RA | 162..1649 | 17..1504 | 7440 | 100 | Plus |
| Mlp84B-RC | 3071 | CG1019-RC | 805..992 | 969..1156 | 220 | 74.5 | Plus |
| Mlp84B-RC | 3071 | CG1019-RC | 1114..1301 | 660..847 | 220 | 74.5 | Plus |
| Mlp84B-RB | 2382 | CG1019-RB | 788..975 | 969..1156 | 220 | 74.5 | Plus |
| Mlp84B-RB | 2382 | CG1019-RB | 1097..1284 | 660..847 | 220 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7114272..7115759 | 1504..17 | 7440 | 100 | Minus |
| 2R | 25286936 | 2R | 24077095..24077356 | 950..1211 | 410 | 77.1 | Plus |
| 2R | 25286936 | 2R | 24076718..24076945 | 680..907 | 330 | 76.3 | Plus |
| 2R | 25286936 | 2R | 24077477..24077677 | 1273..1473 | 255 | 75.1 | Plus |
| 2R | 25286936 | 2R | 24075451..24075586 | 137..272 | 245 | 78.7 | Plus |
| 3R | 32079331 | 3R | 7114620..7114807 | 847..660 | 220 | 74.5 | Minus |
| 3R | 32079331 | 3R | 7114929..7115116 | 1156..969 | 220 | 74.5 | Minus |
| 2R | 25286936 | 2R | 24075245..24075336 | 42..133 | 190 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:14:27 has no hits.
BS01547.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:34:37 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RB | 1..1488 | 17..1504 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:19:22 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RB | 135..1639 | 9..1516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:57 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RA | 162..1652 | 17..1506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:34:37 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RB | 135..1639 | 9..1516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:08 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlp84B-RA | 162..1652 | 17..1506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:14:08 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7114269..7115759 | 17..1506 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:57 Download gff for
BS01547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2939991..2941481 | 17..1506 | 99 | | Minus |
BS01547.pep Sequence
Translation from 16 to 1503
> BS01547.pep
MPSFQPIEAPKCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTN
CTEHERELYCKTCHGRKFGPKGYGFGTGAGTLSMDNGSQFLRENGDVPSV
RNGARLEPRAIARAPEGEGCPRCGGYVYAAEQMLARGRSWHKECFKCGTC
KKGLDSILCCEAPDKNIYCKGCYAKKFGPKGYGYGQGGGALQSDCYAHDD
GAPQIRAAIDVDKIQARPGEGCPRCGGVVYAAEQKLSKGREWHKKCFNCK
DCHKTLDSINASDGPDRDVYCRTCYGKKWGPHGYGFACGSGFLQTDGLTE
DQISANRPFYNPDTTSIKARDGEGCPRCGGAVFAAEQQLSKGKVWHKKCY
NCADCHRPLDSVLACDGPDGDIHCRACYGKLFGPKGFGYGHAPTLVSTSG
ESTIQFPDGRPLAGPKTSGGCPRCGFAVFAAEQMISKTRIWHKRCFYCSD
CRKSLDSTNLNDGPDGDIYCRACYGRNFGPKGVGYGLGAGALTTF*
BS01547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlp84B-PC | 495 | CG1019-PC | 1..495 | 1..495 | 2828 | 100 | Plus |
| Mlp84B-PB | 495 | CG1019-PB | 1..495 | 1..495 | 2828 | 100 | Plus |
| Mlp84B-PA | 495 | CG1019-PA | 1..495 | 1..495 | 2828 | 100 | Plus |
| Mlp60A-PC | 486 | CG42309-PC | 3..484 | 4..493 | 1859 | 67 | Plus |
| Mlp60A-PB | 486 | CG42309-PB | 3..484 | 4..493 | 1859 | 67 | Plus |
| Mlp60A-PC | 486 | CG42309-PC | 11..286 | 222..494 | 693 | 46.2 | Plus |
| Mlp60A-PC | 486 | CG42309-PC | 412..485 | 12..84 | 202 | 50 | Plus |
