Clone Sequence Records
BS01569.3prime Sequence
949 bp (770 high quality bases) assembled on 2005-11-29
> BS01569.3prime
ATGGTCTAGAAAGCTTCGCTATTCTATCATGTACTTGGATTCGTCACAGA
ACTCCTCGGTGTCCAGCAGATCGCCGACCAGTTCCTTGACAGAGTCAACG
CTCTGGTAGCCACCGACGTACGGGTAGGAATCGTCATGCTGCAGCCCTTC
GCGGTCATTGGCCTCCTGCTCCGCGTTGTCCTCCTCGTTGAACATGAAGT
CATTCGCCACAATGCACTCCTCGAGAACCTTTGTCTGCTCCAGCTCTACG
GAGTCCAGCGAAAAGGACTCGGGGATTTGCTGTTGCTTGCGCGCTGACTC
CTTCCGTGCGGAGGCATTCTGGTTGCGACTGGATGCATCAGCGGATGATG
ATGCGACCGATGCCTCGCCGTTGCCCGAGCCTCGGTGCTGTTCCATATGA
GCCGACAGATAGGTCTTCTTGGTGAAACCCTTGTCGCACTGCGTGCACTG
GAACTGCTTCTTGCCGGTGTGCGTCCGCCGATGGGCGGACAGAACGTGAG
CATAGGCGAATCCCTTGTTGCACACCTCGCACACATACGGCCGCTCGCCG
GTGTGGATCCTCTCGTGCTTCTTGCTGCTGCCAAAGTCCGAGAAACGACG
CTCGCAGTGCCGACAGCTGTAGGGCTTCTGGCCGGTATGGACGCGCATGT
GGCGTCGCAGCTCAACGTTTGAGATGAACGCCTTCTGGCACACCTCGCAG
GAATATGGGCGCTCGTTGTTGTGACGCCGCATGTGGGCATTTAGCGCGTG
CTGGTACTTGTATGTATTACCGCAAACATCGCAGATCTTTGGCGAGCGTT
CGCAGTTGCGGCGTTTGGTCGTGGAACCGGCCTTAAAATCATCGTCCACG
TTCGCCGTCAGTTTTTCATGCTTCACATTGGGCGAAACGCGACGGTAGGT
GCGCTTTTTCTGCTGGGTGGGCGGGATGAGTAGGCGGCAACGGGCAACG
BS01569.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-PA | 1683 | CG9215-RA | 786..1683 | 916..19 | 4490 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 15:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-RA | 1945 | CG9215-RA | 861..1789 | 949..19 | 4590 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 15:31:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15581086..15582009 | 19..943 | 4560 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-01-31 15:31:40 has no hits.
BS01569.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:53 Download gff for
BS01569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-PA | 755..1683 | 19..949 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:36 Download gff for
BS01569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-PA | 755..1683 | 19..949 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 09:27:43 Download gff for
BS01569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 861..1789 | 19..949 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 17:43:07 Download gff for
BS01569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 861..1789 | 19..949 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 17:43:07 Download gff for
BS01569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15581087..15582014 | 20..949 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 09:27:43 Download gff for
BS01569.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15475120..15476047 | 20..949 | 99 | | Plus |
BS01569.5prime Sequence
806 bp (805 high quality bases) assembled on 2005-11-29
> BS01569.5prime
GAAGTTATCAGTCGACATGTCCAACAACCTGCAGCCGCGTGTGGTGGACC
TGGGCGTGGCTTGCCTGGTCTGCCTGGCGGAGGAGCCCGAGGCCAGCTCG
ATCTATGGCCACGACCCGGAGTCTCCTCATATGCTCATCCTGGACAAGAT
TCGCTGCTGCACCAGCCTGCAGCTGGACAGCAGCCCGTCGCAGCTGCAGC
GCTGGCCGGACAAGATCTGCAAGCAGTGCCATCTGGAGCTGTCCGTCTCT
TATCGCTTTCACGAAAAGTGCACCGCTGTCCAGAAGCTATTTCGCTCCGC
CAGCCGCTCTACCTCGACCTCCGCCGTCTTCGCCGCCGCTGCTGCTGCTC
CTCCTGCCCCTATGCTGGTCGATAAGCAGCAGGAGCAGCTTAAGCTTGAT
CTGGAACAGGCTCACGTTCGGCTGCCAGCAACACTGAAAATAAGGAGGCT
CAACGTGGAGCCCTGCTCTTCCAGTTCAGTAAGCGGTACAATAACTACCA
GCACGGAGCCCTCCGAGGATGTCAAGGAGGAGAAGACCGATTCACTATCC
CTGATACCAGACGGAGCGATGGTCCTATCCCTGAATGACTTTCAAGCGCA
GGATTCTATTACTCAGCAGGCAGAAGAAAAGGACCCTAAAAAACAGCAGG
ATGAGGATGAGGGGCAGGCCAAGATGCTGGAACTGGATCCTTGGGATGAC
GAANACACGCCGGAGCATCTGTACGAGATCGAGACTCCGCTCATCGAGGA
GTCTGTGGTGGCCAGTCCGCCGTTGCCGTTGCCGCCTACTCATCCCGCCA
ACCAGC
BS01569.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-PA | 1683 | CG9215-RA | 1..790 | 17..806 | 3931 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-RA | 1945 | CG9215-RA | 107..896 | 17..806 | 3939 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:38:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15581979..15582768 | 806..17 | 3939 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:38:22 has no hits.
BS01569.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:10:54 Download gff for
BS01569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-PA | 1..790 | 17..806 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:37 Download gff for
BS01569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-PA | 1..790 | 17..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:50:58 Download gff for
BS01569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 103..896 | 10..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:21:32 Download gff for
BS01569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 103..896 | 10..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:21:32 Download gff for
BS01569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15581979..15582772 | 10..806 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:50:58 Download gff for
BS01569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15476012..15476805 | 10..806 | 99 | | Minus |
BS01569.complete Sequence
1717 bp assembled on 2007-10-05
GenBank Submission: FJ634647
> BS01569.complete
GAAGTTATCAGTCGACATGTCCAACAACCTGCAGCCGCGTGTGGTGGACC
TGGGCGTGGCTTGCCTGGTCTGCCTGGCGGAGGAGCCCGAGGCCAGCTCG
ATCTATGGCCACGACCCGGAGTCTCCTCATATGCTCATCCTGGACAAGAT
TCGCTGCTGCACCAGCCTGCAGCTGGACAGCAGCCCGTCGCAGCTGCAGC
GCTGGCCGGACAAGATCTGCAAGCAGTGCCATCTGGAGCTGTCCGTCTCT
TATCGCTTTCACGAAAAGTGCACCGCTGTCCAGAAGCTATTTCGCTCCGC
CAGCCGCTCTACCTCGACCTCCGCCGTCTTCGCCGCCGCTGCTGCTGCTC
CTCCTGCCCCTATGCTGGTCGATAAGCAGCAGGAGCAGCTTAAGCTTGAT
CTGGAACAGGCTCACGTTCGGCTGCCAGCAACACTGAAAATAAGGAGGCT
CAACGTGGAGCCCTGCTCTTCCAGTTCAGTAAGCGGTACAATAACTACCA
GCACGGAGCCCTCCGAGGATGTCAAGGAGGAGAAGACCGATTCACTATCC
CTGATACCAGACGGAGCGATGGTCCTATCCCTGAATGACTTTCAAGCGCA
GGATTCTATTACTCAGCAGGCAGAAGAAAAGGACCCTAAAAAACAGCAGG
ATGAGGATGAGGGGCAGGCCAAGATGCTGGAACTGGATCCTTGGGATGAC
GAAAACACGCCGGAGCATCTGTACGAGATCGAGACTCCGCTCATCGAGGA
GTCTGTGGTGGCCAGTCCGCCGTTGCCGTTGCCGCCTACTCATCCCGCCA
ACCAGCAGAAAAAGCGCACCTACCGTCGCGTTTCGCCCAATGTGAAGCAT
GAAAAACTGACGGCGAACGTGGACGATGATTTTAAGGCCGGTTCCACGAC
CAAACGCCGCAACTGCGAACGCTCGCCAAAGATCTGCGATGTTTGCGGTA
ATACATACAAGTACCAGCACGCGCTAAATGCCCACATGCGGCGTCACAAC
AACGAGCGCCCATATTCCTGCGAGGTGTGCCAGAAGGCGTTCATCTCAAA
CGTTGAGCTGCGACGCCACATGCGCGTCCATACCGGCCAGAAGCCCTACA
GCTGTCGGCACTGCGAGCGTCGTTTCTCGGACTTTGGCAGCAGCAAGAAG
CACGAGAGGATCCACACCGGCGAGCGGCCGTATGTGTGCGAGGTGTGCAA
CAAGGGATTCGCCTATGCTCACGTTCTGTCCGCCCATCGGCGGACGCACA
CCGGCAAGAAGCAGTTCCAGTGCACGCAGTGCGACAAGGGTTTCACCAAG
AAGACCTATCTGTCGGCTCATATGGAACAGCACCGAGGCTCGGGCAACGG
CGAGGCATCGGTCGCATCATCATCCGCTGATGCATCCAGTCGCAACCAGA
ATGCCTCCGCACGGAAGGAGTCAGCGCGCAAGCAACAGCAAATCCCCGAG
TCCTTTTCGCTGGACTCCGTAGAGCTGGAGCAGACAAAGGTTCTCGAGGA
GTGCATTGTGGCGAATGACTTCATGTTCAACGAGGAGGACAACGCGGAGC
AGGAGGCCAATGACCGCGAAGGGCTGCAGCATGACGATTCCTACCCGTAC
GTCGGTGGCTACCAGAGCGTTGACTCTGTCAAGGAACTGGTCGGCGATCT
GCTGGACACCGAGGAGTTCTGTGACGAATCCAAGTACATGATAGAATAGC
GAAGCTTTCTAGACCAT
BS01569.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:36:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-RA | 1683 | CG9215-PA | 1..1683 | 17..1699 | 8415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:36:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-RA | 1945 | CG9215-RA | 107..1789 | 17..1699 | 8415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15581086..15582768 | 1699..17 | 8415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:36:19 has no hits.
BS01569.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:19:02 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 1..1683 | 17..1699 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:50:34 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 101..1787 | 10..1699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:12:07 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 107..1789 | 17..1701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:19:02 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 101..1787 | 10..1699 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:24:44 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9215-RA | 107..1789 | 17..1701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:24:44 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15581084..15582768 | 17..1701 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:12:07 Download gff for
BS01569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15475117..15476801 | 17..1701 | 99 | | Minus |
BS01569.pep Sequence
Translation from 16 to 1698
> BS01569.pep
MSNNLQPRVVDLGVACLVCLAEEPEASSIYGHDPESPHMLILDKIRCCTS
LQLDSSPSQLQRWPDKICKQCHLELSVSYRFHEKCTAVQKLFRSASRSTS
TSAVFAAAAAAPPAPMLVDKQQEQLKLDLEQAHVRLPATLKIRRLNVEPC
SSSSVSGTITTSTEPSEDVKEEKTDSLSLIPDGAMVLSLNDFQAQDSITQ
QAEEKDPKKQQDEDEGQAKMLELDPWDDENTPEHLYEIETPLIEESVVAS
PPLPLPPTHPANQQKKRTYRRVSPNVKHEKLTANVDDDFKAGSTTKRRNC
ERSPKICDVCGNTYKYQHALNAHMRRHNNERPYSCEVCQKAFISNVELRR
HMRVHTGQKPYSCRHCERRFSDFGSSKKHERIHTGERPYVCEVCNKGFAY
AHVLSAHRRTHTGKKQFQCTQCDKGFTKKTYLSAHMEQHRGSGNGEASVA
SSSADASSRNQNASARKESARKQQQIPESFSLDSVELEQTKVLEECIVAN
DFMFNEEDNAEQEANDREGLQHDDSYPYVGGYQSVDSVKELVGDLLDTEE
FCDESKYMIE*
BS01569.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:19:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9215-PA | 560 | CG9215-PA | 1..560 | 1..560 | 2959 | 100 | Plus |
| CG4424-PA | 345 | CG4424-PA | 89..319 | 189..437 | 419 | 35.7 | Plus |
| trem-PA | 439 | CG4413-PA | 10..406 | 14..439 | 419 | 27.7 | Plus |
| M1BP-PA | 418 | CG9797-PA | 30..381 | 35..435 | 412 | 27.5 | Plus |
| CG14711-PA | 377 | CG14711-PA | 227..357 | 306..436 | 411 | 50.4 | Plus |
| CG14711-PA | 377 | CG14711-PA | 196..334 | 319..441 | 243 | 33.1 | Plus |
| CG4424-PA | 345 | CG4424-PA | 189..295 | 335..441 | 215 | 35.5 | Plus |
| CG14711-PA | 377 | CG14711-PA | 7..352 | 16..380 | 181 | 22.8 | Plus |
| CG4424-PA | 345 | CG4424-PA | 185..266 | 359..440 | 159 | 36.6 | Plus |
