Clone BS01583 Report

Search the DGRC for BS01583

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:15
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG11906-RA
Protein status:BS01583.pep: full length peptide match
Sequenced Size:1939

Clone Sequence Records

BS01583.3prime Sequence

926 bp (851 high quality bases) assembled on 2005-11-29

> BS01583.3prime
ATGGTCTAGAAAGCTTCGTCAGTGACAGCCAACGCAGTTCGGATTTCGCT
CCTCGAAATCACATATTCCGATAGCGAAACGAAAGGGTTTATGTTGAGGC
AAGTGCATGGGCTGCGTGGAGGGCATCGGTATTCGCGGAATATAGAACTC
ACGTTCTTCGTACGACTTGACTATTCGAGAATAGTCCGATGACCGTGGCA
CATGGCAGTTGACAATCGAGAGCGAACGATCAATGCTGATGAGGGGCTCG
TCGTTGGGACTGTGCCCCAGCTTTTTGCAATGGGCCAGCAGCTTAGCCTC
GCTAAGAAACTCCAATCGGCAGAAATTGCAGTGGTAATTGATCCCTTTCC
TGTGCAGCTGGAAATGCCGATCTAACTGGTGCTGCAACTCAAACTCTTCG
CGGCACTTATGGCAGATGTAGAGGCCGCGGTTCTGGAGATGCATATGGTA
GTCTAAAAAGACCTTGCTGGTGAACACATCGCCGCACTTATGACAGTAAA
ACCAGCTCATCTTCCAGTGCTCCATGTAGTCGTGCTTCATTAGAGCCACT
AGGGTGTCCGTCTGGTAGCCACAGTCAGGCGTGAAACAAGTGAATGATTT
CAGTCGCACCTGCGTCTTGAGCAGGTCCAGTAGGTAAAGATCATACTCCT
TGTCGGTGGTCATGTGCGTTTCCACCATTCCGTAGTCTCCGTACAAAAGG
GAGAGATTACCAGCGCTGTTGCTATTGCTGCGGCTGTGGTTAACAATCCA
GTCGCCAGTAAAGTTCATACGTCGCGCGTACATGGCATCCTCCTCGCCCT
CTTCTAGTTCCTCCCCACCGCTTTCTATCTCTTCATCTTCTTCGTCCTCT
TCCTCCCTCATCATGTCGTACCTATCCCAGGCTTCGGAGCATGCCCGTGA
GCGAGAGCGCATCGAGCATGCCCTTG

BS01583.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-PA 1905 CG11906-RA 1068..1905 856..19 4165 99.8 Minus
CG11906-PA 1905 CG11906-RA 998..1062 926..862 325 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-RA 2289 CG11906-RA 1177..2084 926..19 4480 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 14:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19281623..19282071 19..467 2215 99.6 Plus
2R 25286936 2R 19282369..19282653 642..926 1350 98.2 Plus
2R 25286936 2R 19282129..19282308 463..642 900 100 Plus
Blast to na_te.dros performed on 2015-02-03 14:29:55 has no hits.

BS01583.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:11:10 Download gff for BS01583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-PA 998..1905 19..926 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:58 Download gff for BS01583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-PA 998..1905 19..926 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 05:10:50 Download gff for BS01583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 1177..2094 11..926 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 14:57:20 Download gff for BS01583.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 1177..2094 11..926 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 14:57:20 Download gff for BS01583.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 19281613..19282067 11..463 98 <- Plus
2R 19282130..19282307 464..641 100 <- Plus
2R 19282369..19282653 642..926 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 05:10:50 Download gff for BS01583.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15169118..15169572 11..463 98 <- Plus
arm_2R 15169635..15169812 464..641 100 <- Plus
arm_2R 15169874..15170158 642..926 99   Plus

BS01583.5prime Sequence

906 bp (810 high quality bases) assembled on 2005-11-29

> BS01583.5prime
GAAGTTATCAGTCGACATGCAGGATGCCACGGCTCCGGATCCGGAACCCA
GCAGCACCAACGGCAATTGCTCCGTTGAACATGACAATCGGCAGGATCAG
GATGAGAACCACGTAGGCGCCGAGCGGGAAGCGGAGGCCAACGATGCCAA
CTGCACCGTTTGTGGTGCCGCCAAGGCATCGGCGCTTTTGGATCTGCGCT
CCAACCATGTAATGCAACGTCGCCTAAGTCGCGACTGGAAGATTCATGCA
GATGTAATCCGATCCACATTGAAGGCCATTTGCGTGGAGTGCGTGTGCAA
GCTGAACATGCACTCGGAGGTCACTCGATCCCTGATGCAGCGCATGCAAC
GGCTGCAGCGTTCCGGTGGTGAAACCACCAAGGTGACAACCACCACGACA
TCGCCCAGCCAGCACAGTCCACCCATTGCTGATGCAGAGGTGTCGACCAC
CTTGATTGAGAGTCAGGAGGAGGTGGCCCACAGCGGGCAGAGCGTTCGCT
CGCGTTCTTCCTGCTCCGTGCTGGAAGTATACCTCGCTCAACAACCATAT
TCTCCATCGGCCAAGGAAACGGAAGAGAAGCATGCGGAGGGCTGGAAATG
GCGAACACGGCTGGAGTGTCACGAATGTGGTCGGGCCTATTTTCGACGGG
ATTACTACGCCCAGCACTTGAGGCGCTGCTCCAAAACGCGCAGGAAGCAG
CCACGTCCATCGCGCGTCAAATGCCGGGTACTAAATGAGGCGAGCTATGA
TGAAGAGGCGCCATCCAGAGCCATCCGATCATCGCGCATATACTACTGCC
GGCATTGCGACGCAGAGTTTGAGACCTTAATCAGTAAGCGACAGCATGAG
CGAATGAAGCATCAGCAGCGATATCCGTGGTGATTTGTGCGAAGCCCCAG
TGGGAC

BS01583.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-PA 1905 CG11906-RA 1..863 17..879 4315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-RA 2289 CG11906-RA 180..1067 17..906 4385 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19282831..19283483 897..244 3205 99.7 Minus
2R 25286936 2R 19283551..19283782 248..17 1160 100 Minus
Blast to na_te.dros performed on 2015-02-11 23:32:23 has no hits.

BS01583.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:11:11 Download gff for BS01583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-PA 1..888 17..906 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:20:59 Download gff for BS01583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-PA 1..888 17..906 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:08:31 Download gff for BS01583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 173..1067 9..906 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:57:43 Download gff for BS01583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 173..1067 9..906 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:57:43 Download gff for BS01583.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19282823..19283479 248..906 99 <- Minus
2R 19283552..19283786 9..247 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:08:31 Download gff for BS01583.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15170328..15170984 248..906 99 <- Minus
arm_2R 15171057..15171291 9..247 98   Minus

BS01583.complete Sequence

1939 bp assembled on 2009-02-12

> BS01583.complete
GAAGTTATCAGTCGACATGCAGGATGCCACGGCTCCGGATCCGGAACCCA
GCAGCACCAACGGCAATTGCTCCGTTGAACATGACAATCGGCAGGATCAG
GATGAGAACCACGTAGGCGCCGAGCGGGAAGCGGAGGCCAACGATGCCAA
CTGCACCGTTTGTGGTGCCGCCAAGGCATCGGCGCTTTTGGATCTGCGCT
CCAACCATGTAATGCAACGTCGCCTAAGTCGCGACTGGAAGATTCATGCA
GATGTAATCCGATCCACATTGAAGGCCATTTGCGTGGAGTGCGTGTGCAA
GCTGAACATGCACTCGGAGGTCACTCGATCCCTGATGCAGCGCATGCAAC
GGCTGCAGCGTTCCGGTGGTGAAACCACCAAGGTGACAACCACCACGACA
TCGCCCAGCCAGCACAGTCCACCCATTGCTGATGCAGAGGTGTCGACCAC
CTTGATTGAGAGTCAGGAGGAGGTGGCCCACAGCGGGCAGAGCGTTCGCT
CGCGTTCTTCCTGCTCCGTGCTGGAAGTATACCTCGCTCAACAACCATAT
TCTCCATCGGCCAAGGAAACGGAAGAGAAGCATGCGGAGGGCTGGAAATG
GCGAACACGGCTGGAGTGTCACGAATGTGGTCGGGCCTATTTTCGACGGG
ATTACTACGCCCAGCACTTGAGGCGCTGCTCCAAAACGCGCAGGAAGCAG
CCACGTCCATCGCGCGTCAAATGCCGGGTACTAAATGAGGCGAGCTATGA
TGAAGAGGCGCCATCCAGAGCCATCCGATCATCGCGCATATACTACTGCC
GGCATTGCGACGCAGAGTTTGAGACCTTAATCAGTAAGCGACAGCATGAG
CGAATGAAGCATCAGCAGCGATATCCGTGTGATTTGTGCGAAGCCCAGTT
GGACACGAAGTACGAGTGGGAAATGCATCACACCATCTGCCAGGCCAAGC
AGGAGGCCTTAGCAATTGTGGAGCAGCAGGAAGCTGGCCAAACCGTTATG
ACTTCCCGGGTGCCAAGGGCATGCTCGATGCGCTCTCGCTCACGGGCATG
CTCCGAAGCCTGGGATAGGTACGACATGGATGAGGAGGAAGAGGACGAAG
AAGATGAAGAGATAGAAAGCGGTGGGGAGGAACTAGAAGAGGGCGAGGAG
GATGCCATGTACGCGCGACGTATGAACTTTACTGGCGACTGGATTGTTAA
CCACAGCCGCAGCAATAGCAACAGCGCTGGTAATCTCTCCCTTTTGTACG
GAGACTACGGAATGGTGGAAACGCACATGACCACCGACAAGGAGTATGAT
CTTTACCTACTGGACCTGCTCAAGACGCAGGTGCGACTGAAATCATTCAC
TTGTTTCACGCCTGACTGTGGCTACCAGACGGACACCCTAGTGGCTCTAA
TGAAGCACGACTACATGGAGCACTGGAAGATGAGCTGGTTTTACTGTCAT
AAGTGCGGCGATGTGTTCACCAGCAAGGTCTTTTTAGACTACCATATGCA
TCTCCAGAACCGCGGCCTCTACATCTGCCATAAGTGCCGCGAAGAGTTTG
AGTTGCAGCACCAGTTAGATCGGCATTTCCAGCTGCACAGGAAAGGGATC
AATTACCACTGCAATTTCTGCCGATTGGAGTTTCTTAGCGAGGCTAAGCT
GCTGGCCCATTGCAAAAAGCTGGGGCACAGTCCCAACGACGAGCCCCTCA
TCAGCATTGATCGTTCGCTCTCGATTGTCAACTGCCATGTGCCACGGTCA
TCGGACTATTCTCGAATAGTCAAGTCGTACGAAGAACGTGAGTTCTATAT
TCCGCGAATACCGATGCCCTCCACGCAGCCCATGCACTTGCCTCAACATA
AACCCTTTCGTTTCGCTATCGGAATATGTGATTTCGAGGAGCGAAATCCG
AACTGCGTTGGCTGTCACTGACGAAGCTTTCTAGACCAT

BS01583.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-RA 1905 CG11906-PA 1..1905 17..1921 9510 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-RA 2289 CG11906-RA 180..2084 17..1921 9510 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19282771..19283483 956..244 3550 99.9 Minus
2R 25286936 2R 19281623..19282071 1921..1473 2215 99.6 Minus
2R 25286936 2R 19282369..19282713 1298..954 1725 100 Minus
2R 25286936 2R 19283551..19283782 248..17 1160 100 Minus
2R 25286936 2R 19282129..19282308 1477..1298 900 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:35:06 has no hits.

BS01583.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:35 Download gff for BS01583.complete
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 190..2094 17..1923 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:16 Download gff for BS01583.complete
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 180..2084 17..1923 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:55 Download gff for BS01583.complete
Subject Subject Range Query Range Percent Splice Strand
CG11906-RA 180..2084 17..1923 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:55 Download gff for BS01583.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19281621..19282067 1477..1923 99 <- Minus
2R 19282130..19282307 1299..1476 100 <- Minus
2R 19282369..19282711 956..1298 100 <- Minus
2R 19282772..19283479 248..955 100 <- Minus
2R 19283552..19283782 17..247 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:16 Download gff for BS01583.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15169126..15169572 1477..1923 99 <- Minus
arm_2R 15169635..15169812 1299..1476 100 <- Minus
arm_2R 15169874..15170216 956..1298 100 <- Minus
arm_2R 15170277..15170984 248..955 100 <- Minus
arm_2R 15171057..15171287 17..247 100   Minus

BS01583.pep Sequence

Translation from 16 to 1920

> BS01583.pep
MQDATAPDPEPSSTNGNCSVEHDNRQDQDENHVGAEREAEANDANCTVCG
AAKASALLDLRSNHVMQRRLSRDWKIHADVIRSTLKAICVECVCKLNMHS
EVTRSLMQRMQRLQRSGGETTKVTTTTTSPSQHSPPIADAEVSTTLIESQ
EEVAHSGQSVRSRSSCSVLEVYLAQQPYSPSAKETEEKHAEGWKWRTRLE
CHECGRAYFRRDYYAQHLRRCSKTRRKQPRPSRVKCRVLNEASYDEEAPS
RAIRSSRIYYCRHCDAEFETLISKRQHERMKHQQRYPCDLCEAQLDTKYE
WEMHHTICQAKQEALAIVEQQEAGQTVMTSRVPRACSMRSRSRACSEAWD
RYDMDEEEEDEEDEEIESGGEELEEGEEDAMYARRMNFTGDWIVNHSRSN
SNSAGNLSLLYGDYGMVETHMTTDKEYDLYLLDLLKTQVRLKSFTCFTPD
CGYQTDTLVALMKHDYMEHWKMSWFYCHKCGDVFTSKVFLDYHMHLQNRG
LYICHKCREEFELQHQLDRHFQLHRKGINYHCNFCRLEFLSEAKLLAHCK
KLGHSPNDEPLISIDRSLSIVNCHVPRSSDYSRIVKSYEEREFYIPRIPM
PSTQPMHLPQHKPFRFAIGICDFEERNPNCVGCH*

BS01583.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11906-PA 634 CG11906-PA 1..634 1..634 3447 100 Plus