Clone Sequence Records
BS01603.3prime Sequence
887 bp (811 high quality bases) assembled on 2005-11-30
> BS01603.3prime
ATGGTCTAGAAAGCTTCGCTACAATCCCTCCCCGTTAAGCAGTTCAGTGG
TGGAGGTAGTGGAGTTGCCGCTGGCCACCACTGCAGCTGCAGCTGCCACT
TGCTGAAGAGCCTGCTGTAGAAGGGCCTGCTGCCGCAGTTGCTGCCGGTA
ATAGTTACTGGTGGTCGACTCCTCCGTTGTCAATTGTGATTGCTGATGCT
GCGGGAGTTCATCCTCATCGTCATCTTCGACTAGATAGGCGTGCTGATGA
TCCTCATCCGCAGCGGCCACAGATCCATCGTCCAGCATGTCCACCAGATC
TACAATTTCCGTCTCGGGCTTCTGATCCTCTCCTTCGACGGCTGAGGCTG
CCGCAGCTGCAGCTCTTTGCTGACGCTTAAACAACGATCGCATGGCTATC
TCCGGATGCTTTTTTCGTACATGCTGGCGCAGATGATCTGCCCGCTTCGT
GCGATGACCGCAGACGGAGCACACCATGCTCTTTCCCTTGCCGCACTCCT
GGCGCAGGTGCCGCCGCAAGGTTCCGTGCCTTCGATAAGTTCTATAACAC
TGTGGGCACGTAAAGCTCTCCTCCTGACCCCCATTTCCTGCTCCGCCAAC
TACACTATTTCCGCCGGCTAATAATCCTTGAAAATGATCAAATTGCGGTG
CATGGAAGTGATGCAAGGATCCCGATCCCTGGTGATAGTCATCGCTGCTG
CCATCCATCAGCTCCAGCTTGCTGCCATTTAGATGATTCTGTTGGCTTGA
GGATGAGTCGTCTATCAGCTGCAGGCCTTGGGGATCCCGTTGCTGTGCAT
CCTGTGCCATTAGTCCCAGTTCATCCTGAGATCTGTCGTGCTGCCATGTT
GCATATGTTTGACTAGATCCTTCGCCACCCTGGCTGG
BS01603.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:21:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12052-PA | 2121 | lola-RA | 1253..2121 | 887..19 | 4320 | 99.8 | Minus |
| CG12052-PM | 1398 | lola-RM | 1253..1364 | 887..776 | 535 | 99.1 | Minus |
| CG12052-PL | 1827 | lola-RL | 1253..1364 | 887..776 | 535 | 99.1 | Minus |
| CG12052-PH | 1557 | lola-RH | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PK | 1641 | lola-RK | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PV | 1650 | lola-RV | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PF | 1698 | lola-RF | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PT | 1728 | lola-RT | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PU | 1728 | lola-RU | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PY | 1734 | lola-RY | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PX | 1809 | lola-RX | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PQ | 1812 | lola-RQ | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PZ | 1998 | lola-RZ | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PO | 2007 | lola-RO | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PS | 2163 | lola-RS | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PD | 2247 | lola-RD | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PE | 2247 | lola-RE | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PJ | 2274 | lola-RJ | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PW | 2316 | lola-RW | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PC | 2364 | lola-RC | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PB | 2364 | lola-RB | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PN | 2637 | lola-RN | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PG | 2676 | lola-RG | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PR | 2676 | lola-RR | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PP | 2892 | lola-RP | 1253..1363 | 887..777 | 530 | 99 | Minus |
| CG12052-PI | 2913 | lola-RI | 1253..1363 | 887..777 | 530 | 99 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:35:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lola-RA | 2902 | CG12052-RA | 1655..2523 | 887..19 | 4330 | 99.9 | Minus |
| lola-RL | 2823 | CG12052-RL | 1655..1771 | 887..771 | 555 | 98.3 | Minus |
| lola-RE | 3417 | CG12052-RE | 1649..1764 | 887..772 | 550 | 98.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 19:35:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10523876..10524635 | 19..778 | 3800 | 100 | Plus |
| 2R | 25286936 | 2R | 10532038..10532119 | 776..857 | 395 | 98.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 19:35:42 has no hits.
BS01603.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:11:35 Download gff for
BS01603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-PA | 1253..2121 | 19..887 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:21:33 Download gff for
BS01603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12052-PA | 1253..2121 | 19..887 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 19:26:05 Download gff for
BS01603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 1655..2525 | 16..887 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:43:19 Download gff for
BS01603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 1655..2525 | 16..887 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 21:43:19 Download gff for
BS01603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10523874..10524633 | 16..776 | 99 | <- | Plus |
| 2R | 10532039..10532119 | 777..857 | 98 | <- | Plus |
| 2R | 10532181..10532210 | 858..887 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 19:26:05 Download gff for
BS01603.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6411379..6412138 | 16..776 | 99 | <- | Plus |
| arm_2R | 6419544..6419624 | 777..857 | 98 | <- | Plus |
| arm_2R | 6419686..6419715 | 858..887 | 100 | | Plus |
BS01603.5prime Sequence
851 bp (785 high quality bases) assembled on 2005-11-30
> BS01603.5prime
GAAGTTATCAGTCGACATGGATGACGATCAGCAGTTTTGTTTGCGGTGGA
ACAACCACCAGAGCACACTGATCAGCGTGTTCGACACGTTGCTGGAGAAC
GAGACTCTAGTCGATTGCACGCTAGCCGCCGAGGGCAAATTTCTCAAGGC
CCACAAGGTGGTGCTGTCAGCATGCAGTCCCTACTTTGCTACCTTACTAC
AAGAACAGTACGACAAACATCCCATCTTTATACTCAAGGATGTCAAGTAC
CAAGAGCTGCGCGCCATGATGGACTACATGTACCGCGGCGAGGTCAATAT
CTCGCAGGATCAGCTGGCCGCTCTGCTCAAGGCCGCCGAATCGCTTCAGA
TCAAGGGCCTTTCGGACAATCGCACTGGCGGCGGAGTAGCTCCCAAGCCA
GAGTCCTCCGGCCATCATCGCGGCGGTAAGCTGAGCGGTGCCTACACACT
GGAGCAAACTAAGCGGGCTCGACTGGCCACCGGCGGAGCGATGGATACGT
CTGGCGATGTGTCCGGTTCGCGCGAGGGCTCCTCGAGTCCGTCGCGTCGT
CGCCGAAAAGTCCGACGTCGCAGCATGGAGAATGATGCCCACGACAACTC
AAACTCGTCCGTGTTACAAGCCGCCGCCTCGAATCAGTCAATCCTCCAGC
AGACAGGGGCCGGTTTGGCCGTCTCCGCTTTGGTCACCACCCAGTTGTCC
AGCGGACCGGCAGCCGGAACCAGCAGCCAAGCGTCGTCGACCCAACAACA
GCAGCCATTGACCAGCACCAACGTTACCAAAAAGACTGAAAGCGCTAAAC
TAACATCCTCGACAGCCGCCCCAGCGAGCGGAGCATCTGCGTCAGCGGCT
G
BS01603.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12052-PX | 1809 | lola-RX | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PG | 2676 | lola-RG | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PI | 2913 | lola-RI | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PF | 1698 | lola-RF | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PO | 2007 | lola-RO | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PJ | 2274 | lola-RJ | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PL | 1827 | lola-RL | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PR | 2676 | lola-RR | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PY | 1734 | lola-RY | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PP | 2892 | lola-RP | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PN | 2637 | lola-RN | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PK | 1641 | lola-RK | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PQ | 1812 | lola-RQ | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PS | 2163 | lola-RS | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PT | 1728 | lola-RT | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PA | 2121 | lola-RA | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PM | 1398 | lola-RM | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PH | 1557 | lola-RH | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PD | 2247 | lola-RD | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PC | 2364 | lola-RC | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PE | 2247 | lola-RE | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PW | 2316 | lola-RW | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PU | 1728 | lola-RU | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PV | 1650 | lola-RV | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PB | 2364 | lola-RB | 1..835 | 17..851 | 4175 | 100 | Plus |
| CG12052-PZ | 1998 | lola-RZ | 1..835 | 17..851 | 4175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:30:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lola-RAA | 4623 | CG12052-RA | 607..1441 | 17..851 | 4175 | 100 | Plus |
| lola-RZ | 2707 | CG12052-RZ | 403..1237 | 17..851 | 4175 | 100 | Plus |
| lola-RB | 2974 | CG12052-RB | 397..1231 | 17..851 | 4175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10533118..10533511 | 584..191 | 1970 | 100 | Minus |
| 2R | 25286936 | 2R | 10532628..10532895 | 851..584 | 1340 | 100 | Minus |
| 2R | 25286936 | 2R | 10533576..10533749 | 190..17 | 870 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 17:30:29 has no hits.
BS01603.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:11:36 Download gff for
BS01603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12052-PS | 1..835 | 17..851 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:21:35 Download gff for
BS01603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12052-PZ | 1..835 | 17..851 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 14:49:31 Download gff for
BS01603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RB | 393..1231 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:09:56 Download gff for
BS01603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RB | 393..1231 | 9..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:09:56 Download gff for
BS01603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10532628..10532894 | 585..851 | 100 | <- | Minus |
| 2R | 10533118..10533511 | 191..584 | 100 | <- | Minus |
| 2R | 10533576..10533753 | 9..190 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 14:49:31 Download gff for
BS01603.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6420133..6420399 | 585..851 | 100 | <- | Minus |
| arm_2R | 6420623..6421016 | 191..584 | 100 | <- | Minus |
| arm_2R | 6421081..6421258 | 9..190 | 97 | | Minus |
BS01603.complete Sequence
2155 bp (2155 high quality bases) assembled on 2006-03-24
GenBank Submission: FJ634655
> BS01603.complete
GAAGTTATCAGTCGACATGGATGACGATCAGCAGTTTTGTTTGCGGTGGA
ACAACCACCAGAGCACACTGATCAGCGTGTTCGACACGTTGCTGGAGAAC
GAGACTCTAGTCGATTGCACGCTAGCCGCCGAGGGCAAATTTCTCAAGGC
CCACAAGGTGGTGCTGTCAGCATGCAGTCCCTACTTTGCTACCTTACTAC
AAGAACAGTACGACAAACATCCCATCTTTATACTCAAGGATGTCAAGTAC
CAAGAGCTGCGCGCCATGATGGACTACATGTACCGCGGCGAGGTCAATAT
CTCGCAGGATCAGCTGGCCGCTCTGCTCAAGGCCGCCGAATCGCTTCAGA
TCAAGGGCCTTTCGGACAATCGCACTGGCGGCGGAGTAGCTCCCAAGCCA
GAGTCCTCCGGCCATCATCGCGGCGGTAAGCTGAGCGGTGCCTACACACT
GGAGCAAACTAAGCGGGCTCGACTGGCCACCGGCGGAGCGATGGATACGT
CTGGCGATGTGTCCGGTTCGCGCGAGGGCTCCTCGAGTCCGTCGCGTCGT
CGCCGAAAAGTCCGACGTCGCAGCATGGAGAATGATGCCCACGACAACTC
AAACTCGTCCGTGTTACAAGCCGCCGCCTCGAATCAGTCAATCCTCCAGC
AGACAGGGGCCGGTTTGGCCGTCTCCGCTTTGGTCACCACCCAGTTGTCC
AGCGGACCGGCAGCCGGAACCAGCAGCCAAGCGTCGTCGACCCAACAACA
GCAGCCATTGACCAGCACCAACGTTACCAAAAAGACTGAAAGCGCTAAAC
TAACATCCTCGACAGCCGCCCCAGCGAGCGGAGCATCTGCGTCAGCGGCT
GTACAACAGGCCCATCTGCATCAGCAGCAGGCGCAGACCACAAGCGATGC
CATTAACACCGAGAATGTACAAGCCCAGAGCCAAGGTGGCGCCCAAGGCG
TCCAAGGCGATGACGAGGACATTGATGAGGGTAGTGCCGTTGGCGGACCA
AACTCGGCCACCGGACCCAATCCCGCCTCCGCCTCTGCATCCGCCGTCCA
TGCCGGAGTTGTGGTAAAGCAGCTGGCCAGCGTTGTGGACAAATCGTCGT
CGAATCACAAACATAAGATCAAAGACAACAGCGTGTCATCAGTGGGCTCC
GAAATGGTTATTGAACCCAAAGCCGAATACGATGACGATGCGCACGATGA
GAATGTTGAGGATTTGACACTGGACGAGGAGGACATGACAATGGAGGAGC
TGGACCAGACGGCCGGCACCAGCCAGGGTGGCGAAGGATCTAGTCAAACA
TATGCAACATGGCAGCACGACAGATCTCAGGATGAACTTGGACTAATGGC
ACAGGATGCACAGCAACGGGATCCCCAAGGCCTGCAGCTGATAGACGACT
CATCCTCAAGCCAACAGAATCATCTAAATGGCAGCAAGCTGGAGCTGATG
GATGGCAGCAGCGATGACTATCACCAGGGATCGGGATCCTTGCATCACTT
CCATGCACCGCAATTTGATCATTTTCAAGGATTATTAGCCGGCGGAAATA
GTGTAGTTGGCGGAGCAGGAAATGGGGGTCAGGAGGAGAGCTTTACGTGC
CCACAGTGTTATAGAACTTATCGAAGGCACGGAACCTTGCGGCGGCACCT
GCGCCAGGAGTGCGGCAAGGGAAAGAGCATGGTGTGCTCCGTCTGCGGTC
ATCGCACGAAGCGGGCAGATCATCTGCGCCAGCATGTACGAAAAAAGCAT
CCGGAGATAGCCATGCGATCGTTGTTTAAGCGTCAGCAAAGAGCTGCAGC
TGCGGCAGCCTCAGCCGTCGAAGGAGAGGATCAGAAGCCCGAGACGGAAA
TTGTAGATCTGGTGGACATGCTGGACGATGGATCTGTGGCCGCTGCGGAT
GAGGATCATCAGCACGCCTATCTAGTCGAAGATGACGATGAGGATGAACT
CCCGCAGCATCAGCAATCACAATTGACAACGGAGGAGTCGACCACCAGTA
ACTATTACCGGCAGCAACTGCGGCAGCAGGCCCTTCTACAGCAGGCTCTT
CAGCAAGTGGCAGCTGCAGCTGCAGTGGTGGCCAGCGGCAACTCCACTAC
CTCCACCACTGAACTGCTTAACGGGGAGGGATTGTAGCGAAGCTTTCTAG
ACCAT
BS01603.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lola-RA | 2121 | CG12052-PA | 1..2121 | 17..2137 | 10605 | 100 | Plus |
| lola-RL | 1827 | CG12052-PL | 1..1369 | 17..1385 | 6830 | 99.9 | Plus |
| lola-RE | 2247 | CG12052-PE | 1..1368 | 17..1384 | 6825 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:15:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lola-RA | 2902 | CG12052-RA | 403..2523 | 17..2137 | 10605 | 100 | Plus |
| lola-RL | 2823 | CG12052-RL | 403..1771 | 17..1385 | 6830 | 99.9 | Plus |
| lola-RE | 3417 | CG12052-RE | 397..1764 | 17..1384 | 6825 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10523876..10524635 | 2137..1378 | 3800 | 100 | Minus |
| 2R | 25286936 | 2R | 10532181..10532895 | 1298..584 | 3575 | 100 | Minus |
| 2R | 25286936 | 2R | 10533118..10533511 | 584..191 | 1970 | 100 | Minus |
| 2R | 25286936 | 2R | 10533576..10533749 | 190..17 | 870 | 100 | Minus |
| 2R | 25286936 | 2R | 10532038..10532119 | 1380..1299 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:15:27 has no hits.
BS01603.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:39:16 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 1..2121 | 17..2137 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:25:11 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 396..2522 | 9..2140 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:44:05 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 403..2524 | 17..2139 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:39:16 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 396..2522 | 9..2140 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:06 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lola-RA | 403..2524 | 17..2139 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:06 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10523875..10524633 | 1380..2139 | 99 | <- | Minus |
| 2R | 10532039..10532119 | 1299..1379 | 100 | <- | Minus |
| 2R | 10532181..10532894 | 585..1298 | 100 | <- | Minus |
| 2R | 10533118..10533511 | 191..584 | 100 | <- | Minus |
| 2R | 10533576..10533749 | 17..190 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:44:05 Download gff for
BS01603.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6421081..6421254 | 17..190 | 100 | | Minus |
| arm_2R | 6411380..6412138 | 1380..2139 | 99 | <- | Minus |
| arm_2R | 6419544..6419624 | 1299..1379 | 100 | <- | Minus |
| arm_2R | 6419686..6420399 | 585..1298 | 100 | <- | Minus |
| arm_2R | 6420623..6421016 | 191..584 | 100 | <- | Minus |
BS01603.pep Sequence
Translation from 16 to 2136
> BS01603.pep
MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVL
SACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQL
AALLKAAESLQIKGLSDNRTGGGVAPKPESSGHHRGGKLSGAYTLEQTKR
ARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSSVL
QAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTS
TNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQTTSDAINTEN
VQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGVVV
KQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDL
TLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQ
RDPQGLQLIDDSSSSQQNHLNGSKLELMDGSSDDYHQGSGSLHHFHAPQF
DHFQGLLAGGNSVVGGAGNGGQEESFTCPQCYRTYRRHGTLRRHLRQECG
KGKSMVCSVCGHRTKRADHLRQHVRKKHPEIAMRSLFKRQQRAAAAAASA
VEGEDQKPETEIVDLVDMLDDGSVAAADEDHQHAYLVEDDDEDELPQHQQ
SQLTTEESTTSNYYRQQLRQQALLQQALQQVAAAAAVVASGNSTTSTTEL
LNGEGL*
BS01603.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lola-PA | 706 | CG12052-PA | 1..706 | 1..706 | 3599 | 100 | Plus |
| lola-PO | 668 | CG12052-PO | 1..620 | 1..609 | 2418 | 79.7 | Plus |
| lola-PF | 565 | CG12052-PF | 1..555 | 1..574 | 2361 | 83.7 | Plus |
| lola-PE | 748 | CG12052-PE | 1..553 | 1..603 | 2339 | 80.2 | Plus |
| lola-PD | 748 | CG12052-PD | 1..553 | 1..603 | 2339 | 80.2 | Plus |
