Clone Sequence Records
BS01834.3prime Sequence
858 bp (709 high quality bases) assembled on 2005-11-30
> BS01834.3prime
ATGGTCTAGAAAGCTTTTACAACTCGTGACGTGGCGTATTTAAAACCGAA
CTTTGCGTCTGCATCTGGCGCCTGCTGGCCTCCTGGTCATTGTTGCCATC
GTCCGTGTCCAAAATGTCGGACAGATCATACATGGGCTGATAGGAAATCA
GTTCAGAGCCACTGGGTGCTTTCTTTTCACTGCTTATGCTGTCATTGGGA
AACGATAGGCCATAGTTGTCCATTAGATCAGAGTCGTTAAACAGACCCAT
GAGCATGTTCTGATCAATGGCCACCCCATCGCCACGCAGCAGATCCTTCA
GTGTTTCCAACTCATCTTGCATGCTTTCCAAGTGCCCGTGGAGTTCGTCA
ACTGAGGCCATCCTGAGGAGTTGACTGTTGTTGGTATCGCGGTTGTTTCC
GTTCTCAGCGCCACTGTATTTGGCCACAGCCATGCCCTCCTCCTCAGATG
CTTGCGCCTTGGCCGCTGCCTTCGATGTCGAGGCCTGATTGGCATCCAGT
TTGGCTGCCTCTTCCACGCCGTCGGGAAGCAGAGCGTCTTCAAAAATATC
CGTTGGCATATCCTCACTGATGAAGTTAACACTGTACAGATCGTTCGCGG
GAGTCATTAGATCCATCAGTCCGGAACTGTTCTCCGGCTCAGACTTTATA
ATCATTGGCTGGACCATCACATCANGTTGCGTACTATGCTGGATGCTTGT
CCGTTGCGCCTTGGGCGACGAACTATCTACGAGAATATCTCCAGCATCAA
GTATAACATCTCCTGCCTGTCGTCGTAGCTTGTTGTTCTCCTTAAGCTGC
TGACGCTTCTGCTGCTCCTGCTCCCGCACCCATGGCGTGGTAAGCACATT
CTGCTCCT
BS01834.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:24:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5748-PA | 2076 | Hsf-RA | 1594..2076 | 499..17 | 2390 | 99.7 | Minus |
| CG5748-PB | 2148 | Hsf-RB | 1815..2148 | 350..17 | 1670 | 100 | Minus |
| CG5748-PA | 2076 | Hsf-RA | 1176..1511 | 830..495 | 1636 | 99.4 | Minus |
| CG5748-PB | 2148 | Hsf-RB | 1176..1511 | 830..495 | 1636 | 99.4 | Minus |
| CG5748-PC | 2130 | Hsf-RC | 1176..1511 | 830..495 | 1636 | 99.4 | Minus |
| CG5748-PD | 2202 | Hsf-RD | 1176..1511 | 830..495 | 1636 | 99.4 | Minus |
| CG5748-PC | 2130 | Hsf-RC | 1594..1848 | 499..245 | 1250 | 99.6 | Minus |
| CG5748-PC | 2130 | Hsf-RC | 1903..2130 | 244..17 | 1140 | 100 | Minus |
| CG5748-PD | 2202 | Hsf-RD | 1975..2202 | 244..17 | 1140 | 100 | Minus |
| CG5748-PB | 2148 | Hsf-RB | 1594..1742 | 499..351 | 720 | 99.3 | Minus |
| CG5748-PD | 2202 | Hsf-RD | 1594..1742 | 499..351 | 720 | 99.3 | Minus |
| CG5748-PD | 2202 | Hsf-RD | 1815..1920 | 350..245 | 530 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-01 08:54:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsf-RA | 2771 | CG5748-RA | 1837..2319 | 499..17 | 2400 | 99.8 | Minus |
| Hsf-RA | 2771 | CG5748-RA | 1391..1754 | 858..495 | 1749 | 98.9 | Minus |
| Hsf-RD | 2897 | CG5748-RD | 1391..1754 | 858..495 | 1749 | 98.9 | Minus |
| Hsf-RC | 2838 | CG5748-RC | 1404..1767 | 858..495 | 1749 | 98.9 | Minus |
| Hsf-RD | 2897 | CG5748-RD | 2218..2445 | 244..17 | 1140 | 100 | Minus |
| Hsf-RD | 2897 | CG5748-RD | 1837..1985 | 499..351 | 730 | 99.3 | Minus |
| Hsf-RD | 2897 | CG5748-RD | 2058..2163 | 350..245 | 530 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-01 08:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18131793..18132113 | 538..858 | 1534 | 98.4 | Plus |
| 2R | 25286936 | 2R | 18130755..18130908 | 17..170 | 770 | 100 | Plus |
| 2R | 25286936 | 2R | 18131460..18131608 | 351..499 | 730 | 99.3 | Plus |
| 2R | 25286936 | 2R | 18131282..18131387 | 245..350 | 530 | 100 | Plus |
| 2R | 25286936 | 2R | 18130970..18131045 | 169..244 | 380 | 100 | Plus |
| 2R | 25286936 | 2R | 18131691..18131734 | 495..538 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-01 08:54:39 has no hits.
BS01834.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:15:39 Download gff for
BS01834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-PA | 1148..1506 | 500..858 | 98 | | Minus |
| Hsf-PA | 1590..2076 | 17..499 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:26:54 Download gff for
BS01834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5748-PA | 1148..1506 | 500..858 | 98 | <- | Minus |
| CG5748-PA | 1590..2076 | 17..499 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-07 16:12:07 Download gff for
BS01834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RA | 1391..1749 | 500..858 | 98 | <- | Minus |
| Hsf-RA | 1833..2322 | 11..499 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-01 11:52:24 Download gff for
BS01834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RA | 1391..1749 | 500..858 | 98 | <- | Minus |
| Hsf-RA | 1833..2322 | 11..499 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-01 11:52:24 Download gff for
BS01834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18131282..18131387 | 245..350 | 100 | <- | Plus |
| 2R | 18131460..18131608 | 351..499 | 99 | <- | Plus |
| 2R | 18130752..18130906 | 11..168 | 98 | <- | Plus |
| 2R | 18130970..18131045 | 169..244 | 100 | <- | Plus |
| 2R | 18131696..18131734 | 500..538 | 100 | <- | Plus |
| 2R | 18131794..18132113 | 539..858 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-07 16:12:07 Download gff for
BS01834.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14018787..14018892 | 245..350 | 100 | <- | Plus |
| arm_2R | 14018965..14019113 | 351..499 | 99 | <- | Plus |
| arm_2R | 14019201..14019239 | 500..538 | 100 | <- | Plus |
| arm_2R | 14019299..14019618 | 539..858 | 98 | | Plus |
| arm_2R | 14018257..14018411 | 11..168 | 98 | <- | Plus |
| arm_2R | 14018475..14018550 | 169..244 | 100 | <- | Plus |
BS01834.5prime Sequence
718 bp (715 high quality bases) assembled on 2005-11-30
> BS01834.5prime
GAAGTTATCAGTCGACATGTCCAGGTCGCGTTCATCCGCTAAAGCCGTGC
AGTTCAAGCACGAATCGGAGGAAGAGGAAGAAGACGAGGAGGAGCAGCTG
CCTTCCAGGAGAATGCACTCTTACGGAGACGCCGCGGCCATCGGAAGCGG
GGTGCCGGCCTTTTTGGCCAAATTGTGGCGCCTGGTGGACGATGCCGATA
CCAATCGCTTGATTTGCTGGACCAAGGATGGCCAAAGTTTCGTTATTCAA
AATCAAGCGCAATTTGCCAAGGAACTATTGCCACTAAACTACAAGCACAA
CAACATGGCCAGTTTCATAAGGCAATTGAATATGTATGGATTCCACAAGA
TCACCTCTATTGACAATGGCGGACTACGTTTTGATCGCGACGAGATTGAA
TTTTCGCACCCATTTTTTAAGCGCAACTCGCCTTTTCTACTTGACCAAAT
CAAAAGGAAAATATCGAACAACAAAAATGGTGACGACAAAGGTGTCCTGA
AGCCGGAGGCCATGTCGAAGATTCTCACCGATGTGAAAGTCATGCGGGGT
CGTCAGGACAATCTGGATTCGCGCTTCTCCGCCATGAAACAGGAGAACGA
AGTGCTGTGGCGCGAGATAGCCAGCCTGCGCCAAAAGCACGCTAAGCAGC
AACAAATAGTCAACAAACTGATCCAGTTCCTCATTACCATTGTGCAACCG
TCGCGCAACATGTCTGGC
BS01834.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 16:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5748-PB | 2148 | Hsf-RB | 1..702 | 17..718 | 3435 | 99.5 | Plus |
| CG5748-PC | 2130 | Hsf-RC | 1..702 | 17..718 | 3435 | 99.5 | Plus |
| CG5748-PD | 2202 | Hsf-RD | 1..702 | 17..718 | 3435 | 99.5 | Plus |
| CG5748-PA | 2076 | Hsf-RA | 1..702 | 17..718 | 3435 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:03:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsf-RA | 2771 | CG5748-RA | 244..945 | 17..718 | 3465 | 99.6 | Plus |
| Hsf-RD | 2897 | CG5748-RD | 244..945 | 17..718 | 3465 | 99.6 | Plus |
| Hsf-RC | 2838 | CG5748-RC | 257..958 | 17..718 | 3465 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:03:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18132559..18132941 | 718..336 | 1915 | 100 | Minus |
| 2R | 25286936 | 2R | 18133870..18134080 | 227..17 | 1055 | 100 | Minus |
| 2R | 25286936 | 2R | 18133004..18133114 | 335..225 | 510 | 97.3 | Minus |
Blast to na_te.dros performed on 2015-02-11 10:03:35 has no hits.
BS01834.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 07:15:40 Download gff for
BS01834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-PA | 1..702 | 17..718 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:26:55 Download gff for
BS01834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5748-PA | 1..702 | 17..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 02:39:39 Download gff for
BS01834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RC | 257..958 | 17..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:24:36 Download gff for
BS01834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RC | 257..958 | 17..718 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:24:36 Download gff for
BS01834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18132559..18132941 | 336..718 | 100 | <- | Minus |
| 2R | 18133004..18133112 | 227..335 | 97 | <- | Minus |
| 2R | 18133871..18134080 | 17..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 02:39:39 Download gff for
BS01834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14020064..14020446 | 336..718 | 100 | <- | Minus |
| arm_2R | 14020509..14020617 | 227..335 | 97 | <- | Minus |
| arm_2R | 14021376..14021585 | 17..226 | 100 | | Minus |
BS01834.complete Sequence
2021 bp assembled on 2008-08-14
> BS01834.complete
GAAGTTATCAGTCGACATGTCCAGGTCGCGTTCATCCGCTAAAGCCGTGC
AGTTCAAGCACGAATCGGAGGAAGAGGAAGAAGACGAGGAGGAGCAGCTG
CCTTCCAGGAGAATGCACTCTTACGGAGACGCCGCGGCCATCGGAAGCGG
GGTGCCGGCCTTTTTGGCCAAATTGTGGCGCCTGGTGGACGATGCCGATA
CCAATCGCTTGATTTGCTGGACCAAGGATGGCCAAAGTTTCGTTATTCAA
AATCAAGCGCAATTTGCCAAGGAACTATTGCCACTAAACTACAAGCACAA
CAACATGGCCAGTTTCATAAGGCAATTGAATATGTATGGATTCCACAAGA
TCACCTCTATTGACAATGGCGGACTACGTTTTGATCGCGACGAGATTGAA
TTTTCGCACCCATTTTTTAAGCGCAACTCGCCTTTTCTACTTGACCAAAT
CAAAAGGAAAATATCGAACAACAAAAATGGTGACGACAAAGGTGTCCTGA
AGCCGGAGGCCATGTCGAAGATTCTCACCGATGTGAAAGTCATGCGGGGT
CGTCAGGACAATCTGGATTCGCGCTTCTCCGCCATGAAACAGGAGAACGA
AGTGCTGTGGCGCGAGATAGCCAGCCTGCGCCAAAAGCACGCTAAGCAGC
AACAAATAGTCAACAAACTGATCCAGTTCCTCATTACCATTGTGCAACCG
TCGCGCAACATGTCTGGCGTGAAACGCCACGTGCAGCTGATGATCAACAA
TACGCCGGAAATTGATCGTGCACGGACCACCAGTGAGACCGAGAGCGAGA
GTGGCGGCGGACCGGTTATCCACGAGCTTAGGGAGGAGCTTCTTGATGAG
GTGATGAATCCATCACCGGCTGGCTACACCGCAGCCTCACATTATGACCA
AGAGAGCGTCTCTCCGCCTGCCGTTGAGCGTCCGCGATCTAACATGAGCA
TTAGCTCGCACAACGTCGATTATTCGAATCAGAGTGTGGAGGACTTGCTG
CTCCAGGGAAATGGAACCGCTGGCGGTAATATTCTAGTAGGCGGAGCCGC
TTCTCCCATGGCCCAAAGTGTGAGTCAATCGCCGGCCCAACATGATGTCT
ACACAGTCACCGAGGCGCCCGATTCTCATGTCCAGGAGGTGCCAAACAGT
CCGCCTTATTACGAGGAGCAGAATGTGCTTACCACGCCCATGGTGCGGGA
GCAGGAGCAGCAGAAGCGTCAGCAGCTTAAGGAGAACAACAAGCTACGAC
GACAGGCAGGAGATGTTATACTTGATGCTGGAGATATTCTCGTAGATAGT
TCGTCGCCCAAGGCGCAACGGACAAGCATCCAGCATAGTACGCAACCTGA
TGTGATGGTCCAGCCAATGATTATAAAGTCTGAGCCGGAGAACAGTTCCG
GACTGATGGATCTAATGACTCCCGCGAACGATCTGTACAGTGTTAACTTC
ATCAGTGAGGATATGCCAACGGATATTTTTGAAGACGCTCTGCTTCCCGA
CGGCGTGGAAGAGGCAGCCAAACTGGATGCCAATCAGGCCTCGACATCGA
AGGCAGCGGCCAAGGCGCAAGCATCTGAGGAGGAGGGCATGGCTGTGGCC
AAATACAGTGGCGCTGAGAACGGAAACAACCGCGATACCAACAACAGTCA
ACTCCTCAGGATGGCCTCAGTTGACGAACTCCACGGGCACTTGGAAAGCA
TGCAAGATGAGTTGGAAACACTGAAGGATCTGCTGCGTGGCGATGGGGTG
GCCATTGATCAGAACATGCTCATGGGTCTGTTTAACGACTCTGATCTAAT
GGACAACTATGGCCTATCGTTTCCCAATGACAGCATAAGCAGTGAAAAGA
AAGCACCCAGTGGCTCTGAACTGATTTCCTATCAGCCCATGTATGATCTG
TCCGACATTTTGGACACGGACGATGGCAACAATGACCAGGAGGCCAGCAG
GCGCCAGATGCAGACGCAAAGTTCGGTTTTAAATACGCCACGTCACGAGT
TGTAAAAGCTTTCTAGACCAT
BS01834.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsf-RA | 2076 | CG5748-PA | 1..1511 | 17..1527 | 7495 | 99.7 | Plus |
| Hsf-RD | 2202 | CG5748-PD | 1..1511 | 17..1527 | 7495 | 99.7 | Plus |
| Hsf-RC | 2130 | CG5748-PC | 1..1511 | 17..1527 | 7495 | 99.7 | Plus |
| Hsf-RA | 2076 | CG5748-PA | 1594..2076 | 1523..2005 | 2400 | 99.8 | Plus |
| Hsf-RD | 2202 | CG5748-PD | 1975..2202 | 1778..2005 | 1140 | 100 | Plus |
| Hsf-RD | 2202 | CG5748-PD | 1594..1742 | 1523..1671 | 730 | 99.3 | Plus |
| Hsf-RD | 2202 | CG5748-PD | 1815..1920 | 1672..1777 | 530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsf-RA | 2771 | CG5748-RA | 244..1754 | 17..1527 | 7495 | 99.7 | Plus |
| Hsf-RD | 2897 | CG5748-RD | 244..1754 | 17..1527 | 7495 | 99.7 | Plus |
| Hsf-RC | 2838 | CG5748-RC | 257..1767 | 17..1527 | 7495 | 99.7 | Plus |
| Hsf-RA | 2771 | CG5748-RA | 1837..2319 | 1523..2005 | 2400 | 99.8 | Plus |
| Hsf-RD | 2897 | CG5748-RD | 2218..2445 | 1778..2005 | 1140 | 100 | Plus |
| Hsf-RD | 2897 | CG5748-RD | 1837..1985 | 1523..1671 | 730 | 99.3 | Plus |
| Hsf-RD | 2897 | CG5748-RD | 2058..2163 | 1672..1777 | 530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18131793..18132941 | 1484..336 | 5730 | 99.9 | Minus |
| 2R | 25286936 | 2R | 18133870..18134080 | 227..17 | 1055 | 100 | Minus |
| 2R | 25286936 | 2R | 18130755..18130908 | 2005..1852 | 770 | 100 | Minus |
| 2R | 25286936 | 2R | 18131460..18131608 | 1671..1523 | 730 | 99.3 | Minus |
| 2R | 25286936 | 2R | 18131282..18131387 | 1777..1672 | 530 | 100 | Minus |
| 2R | 25286936 | 2R | 18133004..18133114 | 335..225 | 510 | 97.3 | Minus |
| 2R | 25286936 | 2R | 18130970..18131045 | 1853..1778 | 380 | 100 | Minus |
| 2R | 25286936 | 2R | 18131691..18131734 | 1527..1484 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:42:09 has no hits.
BS01834.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:18:00 Download gff for
BS01834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RB | 241..1746 | 17..1522 | 99 | <- | Plus |
| Hsf-RB | 1830..1982 | 1523..1671 | 96 | -> | Plus |
| Hsf-RB | 2055..2391 | 1672..2011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:31:51 Download gff for
BS01834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RC | 257..1765 | 17..1525 | 99 | -> | Plus |
| Hsf-RC | 1853..2104 | 1526..1777 | 99 | -> | Plus |
| Hsf-RC | 2159..2384 | 1778..2003 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:18 Download gff for
BS01834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RB | 241..1746 | 17..1522 | 99 | <- | Plus |
| Hsf-RB | 1830..1982 | 1523..1671 | 96 | -> | Plus |
| Hsf-RB | 2055..2386 | 1672..2003 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:50:57 Download gff for
BS01834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsf-RC | 257..1765 | 17..1525 | 99 | -> | Plus |
| Hsf-RC | 1853..2104 | 1526..1777 | 99 | -> | Plus |
| Hsf-RC | 2159..2384 | 1778..2003 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:50:57 Download gff for
BS01834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18130757..18130906 | 1854..2003 | 100 | <- | Minus |
| 2R | 18130970..18131045 | 1778..1853 | 100 | <- | Minus |
| 2R | 18131282..18131387 | 1672..1777 | 100 | <- | Minus |
| 2R | 18131460..18131608 | 1523..1671 | 99 | <- | Minus |
| 2R | 18131696..18131734 | 1484..1522 | 100 | <- | Minus |
| 2R | 18131794..18132941 | 336..1483 | 99 | <- | Minus |
| 2R | 18133004..18133112 | 227..335 | 97 | <- | Minus |
| 2R | 18133871..18134080 | 17..226 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:31:51 Download gff for
BS01834.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14018965..14019113 | 1523..1671 | 99 | <- | Minus |
| arm_2R | 14019201..14019239 | 1484..1522 | 100 | <- | Minus |
| arm_2R | 14018262..14018411 | 1854..2003 | 100 | <- | Minus |
| arm_2R | 14018475..14018550 | 1778..1853 | 100 | <- | Minus |
| arm_2R | 14018787..14018892 | 1672..1777 | 100 | <- | Minus |
| arm_2R | 14019299..14020446 | 336..1483 | 99 | <- | Minus |
| arm_2R | 14020509..14020617 | 227..335 | 97 | <- | Minus |
| arm_2R | 14021376..14021585 | 17..226 | 100 | | Minus |
BS01834.pep Sequence
Translation from 16 to 2004
> BS01834.pep
MSRSRSSAKAVQFKHESEEEEEDEEEQLPSRRMHSYGDAAAIGSGVPAFL
AKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASF
IRQLNMYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRKIS
NNKNGDDKGVLKPEAMSKILTDVKVMRGRQDNLDSRFSAMKQENEVLWRE
IASLRQKHAKQQQIVNKLIQFLITIVQPSRNMSGVKRHVQLMINNTPEID
RARTTSETESESGGGPVIHELREELLDEVMNPSPAGYTAASHYDQESVSP
PAVERPRSNMSISSHNVDYSNQSVEDLLLQGNGTAGGNILVGGAASPMAQ
SVSQSPAQHDVYTVTEAPDSHVQEVPNSPPYYEEQNVLTTPMVREQEQQK
RQQLKENNKLRRQAGDVILDAGDILVDSSSPKAQRTSIQHSTQPDVMVQP
MIIKSEPENSSGLMDLMTPANDLYSVNFISEDMPTDIFEDALLPDGVEEA
AKLDANQASTSKAAAKAQASEEEGMAVAKYSGAENGNNRDTNNSQLLRMA
SVDELHGHLESMQDELETLKDLLRGDGVAIDQNMLMGLFNDSDLMDNYGL
SFPNDSISSEKKAPSGSELISYQPMYDLSDILDTDDGNNDQEASRRQMQT
QSSVLNTPRHEL*
BS01834.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:59:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsf-PA | 691 | CG5748-PA | 1..691 | 1..662 | 3340 | 95.8 | Plus |
| Hsf-PC | 709 | CG5748-PC | 1..709 | 1..662 | 3311 | 93.4 | Plus |
| Hsf-PB | 715 | CG5748-PB | 1..715 | 1..662 | 3305 | 92.6 | Plus |
| Hsf-PD | 733 | CG5748-PD | 1..733 | 1..662 | 3276 | 90.3 | Plus |
