BS02266.complete Sequence
1681 bp assembled on 2010-07-06
GenBank Submission: KX800147
> BS02266.complete
GAAGTTATCAGTCGACATGGATAAACTCAAGTACAGCCGCTGCCCGCTCA
AGAAGCGTCCGATAATGGTGGAGGAGTCCAGCCCAGAGGATCACCTAAGT
CATGATGAAGGACCAGTGGACTTGAGTGTGGCCTCGGCTGCAGTGCCTAT
GGAGCCCCATTGGATGGCTAAATCCGAACCGGAACCTCAGCCGGTGCCCA
CGGAATTGAGGCGCCGCTTCGATGCAGCCATGAATCAGACCAAGGAGCAG
TTGGCCCGTCGCATTTGGGAGGAAACCCGTGAGATAGCCCGCGCTTTTCC
GGATGTCTTCACCCGGGAGGAAATCGCCAAGAGTCTTGCTCGCCTGGGTT
ACGGCGAGTTCGAGTTGCCACCTGAGGAGGAAGTAATGGAGCCGGAGCCG
GAACCAGAACAGCATCTGCCTCTTCGATATACAAGAGATGCTAGCCCAAC
CATCATCAAGGCTGAACCCTCTGATGAGGAACAATTTCCCCTGCGAAACT
ACAATAACAACCTACTCAAAAGCATAGCCGAGTATGAGGACTGTATGAAA
ATGCAGAACATCAAAGAGGAGATACCTCCGATTCCATCACCCCAGTTGTT
CTATCCACCCCCGACTCCACTGGCCGAACCGGAGGACCTATCCGTAACCC
AGAGGAGAGTGCTGAGCGAAAACATGAATCTGCAGAATGTGGCCAGAGCT
TTGCTGAGCATGCAACACATGGCTCCGCAACATGCGCCGCCTCCGATAGA
CATGGAAGAGGATCAGGAGAATCAGGACATCAACCAGCTGAAGATCAAGA
GCAGCAATGATCTGTACTACCAGTGCCAGCAGTGCAACAAGTGCTATGCC
ACCTATGCAGGATTGGTAAAGCATCAACAAACGCACGCCTACGAAAGCAC
CGAGTACAAGATCATTAGAAGCCAGCCTGGAGGATCAGGTGCGATAGTCG
ACCAAACCGAGTTTTGCACGGATCAAGCTTCGGCTTTGATTCAGGCAGCT
AATGTAGCCTCAGCACAGAGCATGCAAAAGCCAGTGGGAGTGCCGCGATA
CCATTGCCAGGATTGCGGAAAGAGCTACTCCACCTACTCGGGACTCTCTA
AGCACCAGCAGTTCCATTGTCCGTCGGCCGAGGGCAATCAGGTGAAGAAG
GTCTTCAGCTGCAAGAACTGCGACAAGACCTATGTGTCCTTGGGCGCCCT
GAAGATGCACATTCGCACGCATACCCTGCCCTGCAAGTGTCCCATCTGCG
GCAAGGCGTTTTCGCGACCATGGCTCCTCCAGGGTCACATACGCACCCAC
ACGGGAGAGAAGCCCTTCAGTTGCCAACACTGCAATCGGGCCTTCGCGGA
TAGGTCAAATCTCCGCGCGCACATGCAAACCCATTCGGATGTGAAGAAGT
ACTCGTGCCCCACCTGCACCAAGTCCTTCTCGCGTATGTCCCTGCTGGCC
AAGCACCTGCAAAGCGGTTGCCAGACTGAGCAGAGTGGAGGTCCCAGTGG
GTCAGGAGGGGGCTTTGATCAGCAGCAGCTACAGCAGCACCTCCAGGTCT
ACGAGGAGGGACACAATCCACACCAACTCTACTACGCCGGCAGTGTGGGC
AGCAGTAATGGTGAAGAGGAGGAGGGCGGGGAATACCAAATGCAACCACC
GGCCATTTATTAACGAAGCTTTCTAGACCAT
BS02266.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wor-RA | 1647 | CG4158-PA | 1..1647 | 17..1663 | 8235 | 100 | Plus |
| esg-RA | 1413 | CG3758-PA | 918..1331 | 1042..1455 | 870 | 80.7 | Plus |
| sna-RA | 1173 | CG3956-PA | 760..1002 | 1076..1318 | 405 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:49:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wor-RA | 2222 | CG4158-RA | 150..1797 | 16..1663 | 8240 | 100 | Plus |
| esg-RA | 2273 | CG3758-RA | 1146..1559 | 1042..1455 | 870 | 80.7 | Plus |
| sna-RA | 1668 | CG3956-RA | 913..1155 | 1076..1318 | 405 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:49:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15423722..15425281 | 1663..104 | 7800 | 100 | Minus |
| 2L | 23513712 | 2L | 15335011..15335424 | 1042..1455 | 870 | 80.7 | Plus |
| 2L | 23513712 | 2L | 15425343..15425431 | 104..16 | 445 | 100 | Minus |
| 2L | 23513712 | 2L | 15477106..15477348 | 1318..1076 | 405 | 77.8 | Minus |
| 3L | 28110227 | 3L | 584769..584856 | 1319..1232 | 185 | 80.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:49:12 has no hits.
BS02266.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-06 16:39:58 Download gff for
BS02266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wor-RA | 156..1802 | 17..1665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:40 Download gff for
BS02266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wor-RA | 151..1797 | 17..1665 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:22 Download gff for
BS02266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wor-RA | 151..1797 | 17..1665 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:22 Download gff for
BS02266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15423719..15425280 | 105..1665 | 99 | <- | Minus |
| 2L | 15425343..15425430 | 17..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:40 Download gff for
BS02266.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15423719..15425280 | 105..1665 | 99 | <- | Minus |
| arm_2L | 15425343..15425430 | 17..104 | 100 | | Minus |
BS02266.pep Sequence
Translation from 16 to 1662
> BS02266.pep
MDKLKYSRCPLKKRPIMVEESSPEDHLSHDEGPVDLSVASAAVPMEPHWM
AKSEPEPQPVPTELRRRFDAAMNQTKEQLARRIWEETREIARAFPDVFTR
EEIAKSLARLGYGEFELPPEEEVMEPEPEPEQHLPLRYTRDASPTIIKAE
PSDEEQFPLRNYNNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLFYPPPT
PLAEPEDLSVTQRRVLSENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQ
ENQDINQLKIKSSNDLYYQCQQCNKCYATYAGLVKHQQTHAYESTEYKII
RSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRYHCQDC
GKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIR
THTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLR
AHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGGPSGSGGGF
DQQQLQQHLQVYEEGHNPHQLYYAGSVGSSNGEEEEGGEYQMQPPAIY*
BS02266.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wor-PA | 548 | CG4158-PA | 1..548 | 1..548 | 2956 | 100 | Plus |
| esg-PA | 470 | CG3758-PA | 296..460 | 329..496 | 723 | 75.6 | Plus |
| sna-PA | 390 | CG3956-PA | 207..385 | 302..485 | 605 | 61.4 | Plus |
| CG12605-PC | 474 | CG12605-PC | 294..442 | 345..497 | 454 | 54.9 | Plus |
| Kah-PA | 442 | CG17181-PA | 121..270 | 347..499 | 452 | 53.9 | Plus |
